RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 DMXL2Q8TDJ6 3036 aa12.21□□□□□ -0.46
SEMA6C-201ENST00000341697 COX6B2Q6YFQ2 88 aa12.2□□□□□ -0.46
SEMA6C-201ENST00000341697 PMAIP1Q13794 54 aa12.19□□□□□ -0.46
SEMA6C-201ENST00000341697 KRTAP26-1Q6PEX3 210 aa12.19□□□□□ -0.46
SEMA6C-201ENST00000341697 COL12A1Q99715 3063 aa12.19□□□□□ -0.46
SEMA6C-201ENST00000341697 Q8NDZ9 215 aa12.18□□□□□ -0.46
SEMA6C-201ENST00000341697 SPRR1AP35321 89 aa12.17□□□□□ -0.46
SEMA6C-201ENST00000341697 FAM229BQ4G0N7 80 aa12.17□□□□□ -0.46
SEMA6C-201ENST00000341697 PRR26Q8N8Z3 221 aa12.17□□□□□ -0.46
SEMA6C-201ENST00000341697 LCE6AA0A183 80 aa12.16□□□□□ -0.46
SEMA6C-201ENST00000341697 RPS28P62857 69 aaKnown RBP12.15□□□□□ -0.46
SEMA6C-201ENST00000341697 LINC01600Q96MT4 127 aa12.15□□□□□ -0.46
SEMA6C-201ENST00000341697 NBEAL1Q6ZS30 2694 aa12.14□□□□□ -0.47
SEMA6C-201ENST00000341697 C1orf195Q5TG92 126 aa12.13□□□□□ -0.47
SEMA6C-201ENST00000341697 NBEAL2Q6ZNJ1 2754 aa12.13□□□□□ -0.47
SEMA6C-201ENST00000341697 BOD1L1Q8NFC6 3051 aa12.11□□□□□ -0.47
SEMA6C-201ENST00000341697 DNAH14Q0VDD8 3507 aa12.11□□□□□ -0.47
SEMA6C-201ENST00000341697 KLKP1Q107X0 134 aa12.1□□□□□ -0.47
SEMA6C-201ENST00000341697 COA5Q86WW8 74 aa12.1□□□□□ -0.47
SEMA6C-201ENST00000341697 TACC2O95359 2948 aa12.08□□□□□ -0.48
SEMA6C-201ENST00000341697 UTP20O75691 2785 aaKnown RBP12.05□□□□□ -0.48
SEMA6C-201ENST00000341697 ADGRG4Q8IZF6 3080 aa12.05□□□□□ -0.48
SEMA6C-201ENST00000341697 HIVEP1P15822 2718 aa12.05□□□□□ -0.48
SEMA6C-201ENST00000341697 NSD1Q96L73 2696 aaPredicted RBP12.04□□□□□ -0.48
SEMA6C-201ENST00000341697 IGLV8-61A0A075B6I0 122 aa12.02□□□□□ -0.48
SEMA6C-201ENST00000341697 IGLV7-46A0A075B6I9 117 aa12.02□□□□□ -0.49
SEMA6C-201ENST00000341697 RBM12B-AS1Q9P1G2 102 aa12.02□□□□□ -0.49
SEMA6C-201ENST00000341697 KRTAP10-2P60368 255 aa12.01□□□□□ -0.49
SEMA6C-201ENST00000341697 SPRR1BP22528 89 aa12□□□□□ -0.49
SEMA6C-201ENST00000341697 KRTAP10-1P60331 282 aa12□□□□□ -0.49
SEMA6C-201ENST00000341697 SPTBN5Q9NRC6 3674 aaKnown RBP12□□□□□ -0.49
SEMA6C-201ENST00000341697 EYSQ5T1H1 3165 aa11.99□□□□□ -0.49
SEMA6C-201ENST00000341697 Q6ZR54 194 aa11.99□□□□□ -0.49
SEMA6C-201ENST00000341697 LRBAP50851 2863 aa11.95□□□□□ -0.5
SEMA6C-201ENST00000341697 APCP25054 2843 aa11.95□□□□□ -0.5
SEMA6C-201ENST00000341697 KALRNO60229 2985 aa11.94□□□□□ -0.5
SEMA6C-201ENST00000341697 H7BZZ5 65 aa11.93□□□□□ -0.5
SEMA6C-201ENST00000341697 C4orf26Q17RF5 130 aa11.92□□□□□ -0.5
SEMA6C-201ENST00000341697 KMT2BQ9UMN6 2715 aaPredicted RBP11.91□□□□□ -0.5
SEMA6C-201ENST00000341697 DMXL1Q9Y485 3027 aa11.91□□□□□ -0.5
SEMA6C-201ENST00000341697 Q5VSD8 79 aa11.89□□□□□ -0.51
SEMA6C-201ENST00000341697 Q6ZSA8 131 aa11.89□□□□□ -0.51
SEMA6C-201ENST00000341697 KRTAP21-3Q3LHN1 58 aa11.88□□□□□ -0.51
SEMA6C-201ENST00000341697 FREM2Q5SZK8 3169 aa11.88□□□□□ -0.51
SEMA6C-201ENST00000341697 OCR1Q9BZK8 76 aa11.88□□□□□ -0.51
SEMA6C-201ENST00000341697 NBEAQ8NFP9 2946 aa11.88□□□□□ -0.51
SEMA6C-201ENST00000341697 Q8N1X5 172 aa11.87□□□□□ -0.51
SEMA6C-201ENST00000341697 SPANXA2-OT1Q8N9U9 137 aa11.87□□□□□ -0.51
SEMA6C-201ENST00000341697 ZZEF1O43149 2961 aa11.85□□□□□ -0.51
SEMA6C-201ENST00000341697 A8MUN3 132 aa11.85□□□□□ -0.51
SEMA6C-201ENST00000341697 PRO0628Q9UI54 55 aa11.85□□□□□ -0.51
SEMA6C-201ENST00000341697 UQCR11O14957 56 aa11.84□□□□□ -0.51
SEMA6C-201ENST00000341697 REV3LO60673 3130 aa11.84□□□□□ -0.51
SEMA6C-201ENST00000341697 PANO1I0J062 215 aa11.83□□□□□ -0.52
SEMA6C-201ENST00000341697 CYP4F30PQ9H0H9 118 aa11.83□□□□□ -0.52
SEMA6C-201ENST00000341697 MMP24-AS1A0A0U1RRL7 71 aa11.81□□□□□ -0.52
SEMA6C-201ENST00000341697 LINC00472Q9H8W2 130 aa11.79□□□□□ -0.52
SEMA6C-201ENST00000341697 STAB2Q8WWQ8 2551 aa11.76□□□□□ -0.53
SEMA6C-201ENST00000341697 KRTAP4-16G5E9R7 235 aaPredicted RBP11.75□□□□□ -0.53
SEMA6C-201ENST00000341697 LINC00483Q53H64 154 aa11.75□□□□□ -0.53
SEMA6C-201ENST00000341697 USP34Q70CQ2 3546 aa11.75□□□□□ -0.53
SEMA6C-201ENST00000341697 Q6ZRN7 208 aaPredicted RBP11.74□□□□□ -0.53
SEMA6C-201ENST00000341697 ZCCHC13Q8WW36 166 aaKnown RBP11.73□□□□□ -0.53
SEMA6C-201ENST00000341697 MIR22HGQ0VDD5 57 aa11.68□□□□□ -0.54
SEMA6C-201ENST00000341697 TENM4Q6N022 2769 aa11.68□□□□□ -0.54
SEMA6C-201ENST00000341697 NIPBLQ6KC79 2804 aaeCLIP11.68□□□□□ -0.54
SEMA6C-201ENST00000341697 HRES1P13985 223 aa11.67□□□□□ -0.54
SEMA6C-201ENST00000341697 ZANQ9Y493 2812 aa11.66□□□□□ -0.54
SEMA6C-201ENST00000341697 SPEGQ15772 3267 aa11.61□□□□□ -0.55
SEMA6C-201ENST00000341697 Q8N9P0 234 aaPredicted RBP11.59□□□□□ -0.55
SEMA6C-201ENST00000341697 HRNRQ86YZ3 2850 aaPredicted RBP11.57□□□□□ -0.56
SEMA6C-201ENST00000341697 Q5W150 140 aa11.57□□□□□ -0.56
SEMA6C-201ENST00000341697 LINC01554Q52M75 96 aa11.56□□□□□ -0.56
SEMA6C-201ENST00000341697 CFAP47Q6ZTR5 3102 aa11.56□□□□□ -0.56
SEMA6C-201ENST00000341697 SEC61BP60468 96 aaKnown RBP11.56□□□□□ -0.56
SEMA6C-201ENST00000341697 A0A087X002 238 aa11.55□□□□□ -0.56
SEMA6C-201ENST00000341697 CRYBG3Q68DQ2 2970 aa11.54□□□□□ -0.56
SEMA6C-201ENST00000341697 CELSR2Q9HCU4 2923 aa11.54□□□□□ -0.56
SEMA6C-201ENST00000341697 SPINK7P58062 85 aa11.53□□□□□ -0.56
SEMA6C-201ENST00000341697 LOC400499M0QZD8 3231 aa11.53□□□□□ -0.56
SEMA6C-201ENST00000341697 KRTAP11-1Q8IUC1 163 aa11.52□□□□□ -0.56
SEMA6C-201ENST00000341697 FP248Q71RG6 208 aaPredicted RBP11.51□□□□□ -0.57
SEMA6C-201ENST00000341697 M0R2T5 61 aa11.51□□□□□ -0.57
SEMA6C-201ENST00000341697 A0A0D9SG42 100 aa11.49□□□□□ -0.57
SEMA6C-201ENST00000341697 KRTAP7-1Q8IUC3 87 aa11.49□□□□□ -0.57
SEMA6C-201ENST00000341697 ASH1LQ9NR48 2969 aaKnown RBP11.47□□□□□ -0.57
SEMA6C-201ENST00000341697 SPINT4Q6UDR6 99 aa11.45□□□□□ -0.58
SEMA6C-201ENST00000341697 DCHS2Q6V1P9 2916 aa11.45□□□□□ -0.58
SEMA6C-201ENST00000341697 CSAG1Q6PB30 78 aa11.44□□□□□ -0.58
SEMA6C-201ENST00000341697 CRIPTQ9P021 101 aa11.42□□□□□ -0.58
SEMA6C-201ENST00000341697 S4R3F8 94 aa11.41□□□□□ -0.58
SEMA6C-201ENST00000341697 OXTP01178 125 aa11.41□□□□□ -0.58
SEMA6C-201ENST00000341697 Q1T7F1 81 aa11.38□□□□□ -0.59
SEMA6C-201ENST00000341697 DMBT1Q9UGM3 2413 aaPredicted RBP11.36□□□□□ -0.59
SEMA6C-201ENST00000341697 A0A1B0GU33 70 aa11.36□□□□□ -0.59
SEMA6C-201ENST00000341697 KRTAP13-1Q8IUC0 172 aa11.34□□□□□ -0.59
SEMA6C-201ENST00000341697 RPS29P62273 56 aaKnown RBP11.33□□□□□ -0.6
SEMA6C-201ENST00000341697 CDC42SE1Q9NRR8 79 aa11.33□□□□□ -0.6
SEMA6C-201ENST00000341697 ASB16-AS1Q495Z4 193 aa11.32□□□□□ -0.6
SEMA6C-201ENST00000341697 KRTAP29-1A8MX34 341 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms