RNA–Protein interactions for RNA: ENST00000334082.10

HOMER1-202, Transcript of homer scaffold protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOMER1, Length 5,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-202ENST00000334082 KRTAP1-1Q07627 177 aa13.28□□□□□ -0.28
HOMER1-202ENST00000334082 BPTFQ12830 3046 aa13.28□□□□□ -0.28
HOMER1-202ENST00000334082 ATRQ13535 2644 aa13.26□□□□□ -0.29
HOMER1-202ENST00000334082 SPRR1BP22528 89 aa13.26□□□□□ -0.29
HOMER1-202ENST00000334082 MAST4O15021 2626 aa13.23□□□□□ -0.29
HOMER1-202ENST00000334082 PLAC8Q9NZF1 115 aa13.22□□□□□ -0.29
HOMER1-202ENST00000334082 KRTAP26-1Q6PEX3 210 aa13.22□□□□□ -0.29
HOMER1-202ENST00000334082 M0QZ58 72 aa13.2□□□□□ -0.3
HOMER1-202ENST00000334082 SPATA8Q6RVD6 105 aa13.2□□□□□ -0.3
HOMER1-202ENST00000334082 DNAH12Q6ZR08 3092 aa13.17□□□□□ -0.3
HOMER1-202ENST00000334082 FLNAP21333 2647 aaKnown RBP13.15□□□□□ -0.3
HOMER1-202ENST00000334082 Q6ZR54 194 aa13.11□□□□□ -0.31
HOMER1-202ENST00000334082 KRTAP25-1Q3LHN0 102 aa13.1□□□□□ -0.31
HOMER1-202ENST00000334082 A6NN06 94 aa13.09□□□□□ -0.31
HOMER1-202ENST00000334082 ITPR3Q14573 2671 aa13.08□□□□□ -0.32
HOMER1-202ENST00000334082 HELZ2Q9BYK8 2649 aaKnown RBP13.05□□□□□ -0.32
HOMER1-202ENST00000334082 ADM2Q7Z4H4 148 aa13.04□□□□□ -0.32
HOMER1-202ENST00000334082 PLAC4Q8WY50 150 aa13□□□□□ -0.33
HOMER1-202ENST00000334082 NDUFAF8A1L188 74 aa12.96□□□□□ -0.33
HOMER1-202ENST00000334082 KRTAP29-1A8MX34 341 aaPredicted RBP12.96□□□□□ -0.33
HOMER1-202ENST00000334082 SEC61BP60468 96 aaKnown RBP12.95□□□□□ -0.34
HOMER1-202ENST00000334082 CEP350Q5VT06 3117 aa12.94□□□□□ -0.34
HOMER1-202ENST00000334082 CFAP46Q8IYW2 2715 aa12.9□□□□□ -0.34
HOMER1-202ENST00000334082 C20orf166-AS1Q96NR2 134 aa12.89□□□□□ -0.35
HOMER1-202ENST00000334082 PANO1I0J062 215 aa12.86□□□□□ -0.35
HOMER1-202ENST00000334082 UTRNP46939 3433 aa12.85□□□□□ -0.35
HOMER1-202ENST00000334082 CENPEQ02224 2701 aa12.82□□□□□ -0.36
HOMER1-202ENST00000334082 A8MU10 97 aa12.82□□□□□ -0.36
HOMER1-202ENST00000334082 STAB1Q9NY15 2570 aa12.79□□□□□ -0.36
HOMER1-202ENST00000334082 KRTAP1-5Q9BYS1 174 aa12.72□□□□□ -0.37
HOMER1-202ENST00000334082 CHD7Q9P2D1 2997 aa12.72□□□□□ -0.37
HOMER1-202ENST00000334082 KRTAP4-16G5E9R7 235 aaPredicted RBP12.72□□□□□ -0.37
HOMER1-202ENST00000334082 C5orf42Q9H799 3197 aa12.7□□□□□ -0.38
HOMER1-202ENST00000334082 AKAP13Q12802 2813 aa12.7□□□□□ -0.38
HOMER1-202ENST00000334082 FLG2Q5D862 2391 aaPredicted RBP12.69□□□□□ -0.38
HOMER1-202ENST00000334082 A0A087X002 238 aa12.67□□□□□ -0.38
HOMER1-202ENST00000334082 NOTCH2NLQ7Z3S9 236 aa12.67□□□□□ -0.38
HOMER1-202ENST00000334082 Q5VSD8 79 aa12.64□□□□□ -0.39
HOMER1-202ENST00000334082 KRTAP10-1P60331 282 aa12.6□□□□□ -0.39
HOMER1-202ENST00000334082 CHD6Q8TD26 2715 aa12.6□□□□□ -0.39
HOMER1-202ENST00000334082 TEP1Q99973 2627 aaKnown RBP12.59□□□□□ -0.39
HOMER1-202ENST00000334082 LCE6AA0A183 80 aa12.59□□□□□ -0.39
HOMER1-202ENST00000334082 TEX15Q9BXT5 2789 aa12.57□□□□□ -0.4
HOMER1-202ENST00000334082 SETXQ7Z333 2677 aaKnown RBP12.54□□□□□ -0.4
HOMER1-202ENST00000334082 A8MUU9 505 aa12.54□□□□□ -0.4
HOMER1-202ENST00000334082 KRTAP10-2P60368 255 aa12.52□□□□□ -0.4
HOMER1-202ENST00000334082 C10orf95Q9H7T3 257 aa12.49□□□□□ -0.41
HOMER1-202ENST00000334082 PCNTO95613 3336 aa12.45□□□□□ -0.42
HOMER1-202ENST00000334082 NBEAL1Q6ZS30 2694 aa12.45□□□□□ -0.42
HOMER1-202ENST00000334082 CHD9Q3L8U1 2897 aa12.45□□□□□ -0.42
HOMER1-202ENST00000334082 KRTAP11-1Q8IUC1 163 aa12.42□□□□□ -0.42
HOMER1-202ENST00000334082 MGAQ8IWI9 3026 aa12.42□□□□□ -0.42
HOMER1-202ENST00000334082 COL6A5A8TX70 2615 aa12.41□□□□□ -0.42
HOMER1-202ENST00000334082 CFAP54Q96N23 3096 aa12.39□□□□□ -0.43
HOMER1-202ENST00000334082 RANBP2P49792 3224 aaKnown RBP12.38□□□□□ -0.43
HOMER1-202ENST00000334082 DMBT1Q9UGM3 2413 aaPredicted RBP12.37□□□□□ -0.43
HOMER1-202ENST00000334082 UNC79Q9P2D8 2635 aa12.34□□□□□ -0.43
HOMER1-202ENST00000334082 TNP1P09430 55 aa12.34□□□□□ -0.43
HOMER1-202ENST00000334082 ZNF292O60281 2723 aa12.32□□□□□ -0.44
HOMER1-202ENST00000334082 NOTCH1P46531 2555 aa12.29□□□□□ -0.44
HOMER1-202ENST00000334082 GCN1Q92616 2671 aaKnown RBP12.29□□□□□ -0.44
HOMER1-202ENST00000334082 RPS29P62273 56 aaKnown RBP12.28□□□□□ -0.44
HOMER1-202ENST00000334082 HTTP42858 3142 aa12.25□□□□□ -0.45
HOMER1-202ENST00000334082 LAMA3Q16787 3333 aa12.16□□□□□ -0.46
HOMER1-202ENST00000334082 A0A0C4DFX4 3053 aa12.15□□□□□ -0.46
HOMER1-202ENST00000334082 WDFY4Q6ZS81 3184 aa12.15□□□□□ -0.46
HOMER1-202ENST00000334082 TRANK1O15050 2925 aa12.12□□□□□ -0.47
HOMER1-202ENST00000334082 KRTAP7-1Q8IUC3 87 aa12.1□□□□□ -0.47
HOMER1-202ENST00000334082 PP632Q6XCG6 107 aa12.09□□□□□ -0.47
HOMER1-202ENST00000334082 DSPP15924 2871 aaKnown RBP12.08□□□□□ -0.48
HOMER1-202ENST00000334082 NBEAL2Q6ZNJ1 2754 aa12.08□□□□□ -0.48
HOMER1-202ENST00000334082 MAP1AP78559 2803 aaPredicted RBP12.07□□□□□ -0.48
HOMER1-202ENST00000334082 MKI67P46013 3256 aaKnown RBP12.06□□□□□ -0.48
HOMER1-202ENST00000334082 UBR5O95071 2799 aaPredicted RBP12.06□□□□□ -0.48
HOMER1-202ENST00000334082 KRTAP13-2Q52LG2 175 aa12.06□□□□□ -0.48
HOMER1-202ENST00000334082 BAHCC1Q9P281 2608 aa12.06□□□□□ -0.48
HOMER1-202ENST00000334082 IGSF10Q6WRI0 2623 aa12.03□□□□□ -0.48
HOMER1-202ENST00000334082 LAMA2P24043 3122 aaKnown RBP12.02□□□□□ -0.49
HOMER1-202ENST00000334082 KRTAP13-1Q8IUC0 172 aa11.99□□□□□ -0.49
HOMER1-202ENST00000334082 STAB2Q8WWQ8 2551 aa11.99□□□□□ -0.49
HOMER1-202ENST00000334082 P0C880 135 aa11.96□□□□□ -0.49
HOMER1-202ENST00000334082 Q6ZRN7 208 aaPredicted RBP11.96□□□□□ -0.49
HOMER1-202ENST00000334082 BRCA2P51587 3418 aa11.94□□□□□ -0.5
HOMER1-202ENST00000334082 PRUNE2Q8WUY3 3088 aa11.93□□□□□ -0.5
HOMER1-202ENST00000334082 FRYQ5TBA9 3013 aa11.88□□□□□ -0.51
HOMER1-202ENST00000334082 TRIOO75962 3097 aa11.87□□□□□ -0.51
HOMER1-202ENST00000334082 NSD1Q96L73 2696 aaPredicted RBP11.86□□□□□ -0.51
HOMER1-202ENST00000334082 H0YAA0 97 aa11.85□□□□□ -0.51
HOMER1-202ENST00000334082 ITPR2Q14571 2701 aa11.83□□□□□ -0.52
HOMER1-202ENST00000334082 XIRP2A4UGR9 3374 aa11.8□□□□□ -0.52
HOMER1-202ENST00000334082 KRTAP10-8P60410 259 aa11.8□□□□□ -0.52
HOMER1-202ENST00000334082 VPS13AQ96RL7 3174 aa11.74□□□□□ -0.53
HOMER1-202ENST00000334082 ITPR1Q14643 2758 aa11.74□□□□□ -0.53
HOMER1-202ENST00000334082 UNC80Q8N2C7 3258 aa11.71□□□□□ -0.53
HOMER1-202ENST00000334082 TACC2O95359 2948 aa11.63□□□□□ -0.55
HOMER1-202ENST00000334082 FREM2Q5SZK8 3169 aa11.6□□□□□ -0.55
HOMER1-202ENST00000334082 FLNCQ14315 2725 aa11.54□□□□□ -0.56
HOMER1-202ENST00000334082 REV3LO60673 3130 aa11.53□□□□□ -0.56
HOMER1-202ENST00000334082 KALRNO60229 2985 aa11.52□□□□□ -0.57
HOMER1-202ENST00000334082 UTP20O75691 2785 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms