RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 ANAPC11Q9NYG5 84 aa7.08□□□□□ -1.28
POLR1B-202ENST00000333990 BRK1Q8WUW1 75 aa7.08□□□□□ -1.28
POLR1B-202ENST00000333990 DMXL1Q9Y485 3027 aa7.08□□□□□ -1.28
POLR1B-202ENST00000333990 LOC101927531A0A1B0GV80 90 aa7.07□□□□□ -1.28
POLR1B-202ENST00000333990 IGLV5-48A0A075B6I7 105 aa7.07□□□□□ -1.28
POLR1B-202ENST00000333990 A0A0U1RQV1 116 aa7.07□□□□□ -1.28
POLR1B-202ENST00000333990 K7EQZ3 153 aa7.07□□□□□ -1.28
POLR1B-202ENST00000333990 ZZEF1O43149 2961 aa7.07□□□□□ -1.28
POLR1B-202ENST00000333990 A0A1B0GVX0 72 aa7.07□□□□□ -1.28
POLR1B-202ENST00000333990 KRTAP1-5Q9BYS1 174 aa7.07□□□□□ -1.28
POLR1B-202ENST00000333990 C7orf65Q6ZTY9 151 aa7.06□□□□□ -1.28
POLR1B-202ENST00000333990 C8orf17Q9NRJ1 99 aa7.06□□□□□ -1.28
POLR1B-202ENST00000333990 A6NED7 52 aa7.06□□□□□ -1.28
POLR1B-202ENST00000333990 FAM229BQ4G0N7 80 aa7.06□□□□□ -1.28
POLR1B-202ENST00000333990 CD164Q04900 197 aa7.05□□□□□ -1.28
POLR1B-202ENST00000333990 ACYP2P14621 99 aa7.05□□□□□ -1.28
POLR1B-202ENST00000333990 SPTBN5Q9NRC6 3674 aaKnown RBP7.05□□□□□ -1.28
POLR1B-202ENST00000333990 A0A1W2PNM2 257 aa7.03□□□□□ -1.28
POLR1B-202ENST00000333990 KRTAP26-1Q6PEX3 210 aa7.03□□□□□ -1.28
POLR1B-202ENST00000333990 NIPBLQ6KC79 2804 aaeCLIP7.03□□□□□ -1.28
POLR1B-202ENST00000333990 SPRR1AP35321 89 aa7.02□□□□□ -1.29
POLR1B-202ENST00000333990 STAB2Q8WWQ8 2551 aa7.02□□□□□ -1.29
POLR1B-202ENST00000333990 TENM4Q6N022 2769 aa7.01□□□□□ -1.29
POLR1B-202ENST00000333990 DSCR10P59022 87 aa7.01□□□□□ -1.29
POLR1B-202ENST00000333990 Q6ZR54 194 aa7□□□□□ -1.29
POLR1B-202ENST00000333990 OBSCN-AS1Q96MR7 158 aa7□□□□□ -1.29
POLR1B-202ENST00000333990 A0A0G2JQZ4 141 aa7□□□□□ -1.29
POLR1B-202ENST00000333990 LRBAP50851 2863 aa6.99□□□□□ -1.29
POLR1B-202ENST00000333990 SPEGQ15772 3267 aa6.98□□□□□ -1.29
POLR1B-202ENST00000333990 ZANQ9Y493 2812 aa6.96□□□□□ -1.3
POLR1B-202ENST00000333990 C9orf92A6NGG3 77 aa6.96□□□□□ -1.3
POLR1B-202ENST00000333990 PRR26Q8N8Z3 221 aa6.96□□□□□ -1.3
POLR1B-202ENST00000333990 LINC01600Q96MT4 127 aa6.96□□□□□ -1.3
POLR1B-202ENST00000333990 COX6B2Q6YFQ2 88 aa6.95□□□□□ -1.3
POLR1B-202ENST00000333990 SPRR1BP22528 89 aa6.94□□□□□ -1.3
POLR1B-202ENST00000333990 KRTAP10-1P60331 282 aa6.92□□□□□ -1.3
POLR1B-202ENST00000333990 Q8NDZ9 215 aa6.92□□□□□ -1.3
POLR1B-202ENST00000333990 KRTAP10-2P60368 255 aa6.91□□□□□ -1.3
POLR1B-202ENST00000333990 A0A1B0GU69 56 aa6.9□□□□□ -1.31
POLR1B-202ENST00000333990 IGLV7-46A0A075B6I9 117 aa6.9□□□□□ -1.31
POLR1B-202ENST00000333990 RBM12B-AS1Q9P1G2 102 aa6.88□□□□□ -1.31
POLR1B-202ENST00000333990 Q5VSD8 79 aa6.87□□□□□ -1.31
POLR1B-202ENST00000333990 IGLV8-61A0A075B6I0 122 aa6.86□□□□□ -1.31
POLR1B-202ENST00000333990 SVIPQ8NHG7 77 aa6.86□□□□□ -1.31
POLR1B-202ENST00000333990 PSPHP1O15172 72 aa6.85□□□□□ -1.31
POLR1B-202ENST00000333990 HRNRQ86YZ3 2850 aaPredicted RBP6.85□□□□□ -1.31
POLR1B-202ENST00000333990 CELSR2Q9HCU4 2923 aa6.85□□□□□ -1.31
POLR1B-202ENST00000333990 KLKP1Q107X0 134 aa6.84□□□□□ -1.31
POLR1B-202ENST00000333990 Q6ZRN7 208 aaPredicted RBP6.82□□□□□ -1.32
POLR1B-202ENST00000333990 RPS28P62857 69 aaKnown RBP6.81□□□□□ -1.32
POLR1B-202ENST00000333990 C4orf26Q17RF5 130 aa6.81□□□□□ -1.32
POLR1B-202ENST00000333990 Q6ZSA8 131 aa6.81□□□□□ -1.32
POLR1B-202ENST00000333990 DCHS2Q6V1P9 2916 aa6.79□□□□□ -1.32
POLR1B-202ENST00000333990 CRYBG3Q68DQ2 2970 aa6.79□□□□□ -1.32
POLR1B-202ENST00000333990 C1orf195Q5TG92 126 aa6.79□□□□□ -1.32
POLR1B-202ENST00000333990 MYO15AQ9UKN7 3530 aa6.78□□□□□ -1.32
POLR1B-202ENST00000333990 LOC400499M0QZD8 3231 aa6.78□□□□□ -1.32
POLR1B-202ENST00000333990 PANO1I0J062 215 aa6.77□□□□□ -1.33
POLR1B-202ENST00000333990 COA5Q86WW8 74 aa6.77□□□□□ -1.33
POLR1B-202ENST00000333990 DMBT1Q9UGM3 2413 aaPredicted RBP6.77□□□□□ -1.33
POLR1B-202ENST00000333990 LINC00483Q53H64 154 aa6.76□□□□□ -1.33
POLR1B-202ENST00000333990 KRTAP4-16G5E9R7 235 aaPredicted RBP6.76□□□□□ -1.33
POLR1B-202ENST00000333990 NF1P21359 2839 aa6.76□□□□□ -1.33
POLR1B-202ENST00000333990 CFAP47Q6ZTR5 3102 aa6.75□□□□□ -1.33
POLR1B-202ENST00000333990 SPANXA2-OT1Q8N9U9 137 aa6.73□□□□□ -1.33
POLR1B-202ENST00000333990 LINC00472Q9H8W2 130 aa6.73□□□□□ -1.33
POLR1B-202ENST00000333990 ASH1LQ9NR48 2969 aaKnown RBP6.73□□□□□ -1.33
POLR1B-202ENST00000333990 PMAIP1Q13794 54 aa6.73□□□□□ -1.33
POLR1B-202ENST00000333990 OCR1Q9BZK8 76 aa6.71□□□□□ -1.33
POLR1B-202ENST00000333990 MMP24-AS1A0A0U1RRL7 71 aa6.71□□□□□ -1.34
POLR1B-202ENST00000333990 FP248Q71RG6 208 aaPredicted RBP6.7□□□□□ -1.34
POLR1B-202ENST00000333990 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
POLR1B-202ENST00000333990 ZCCHC13Q8WW36 166 aaKnown RBP6.69□□□□□ -1.34
POLR1B-202ENST00000333990 MXRA5Q9NR99 2828 aa6.69□□□□□ -1.34
POLR1B-202ENST00000333990 H7BZZ5 65 aa6.69□□□□□ -1.34
POLR1B-202ENST00000333990 A8MUN3 132 aa6.68□□□□□ -1.34
POLR1B-202ENST00000333990 FBN2P35556 2912 aa6.67□□□□□ -1.34
POLR1B-202ENST00000333990 Q8N1X5 172 aa6.66□□□□□ -1.34
POLR1B-202ENST00000333990 UQCR11O14957 56 aa6.66□□□□□ -1.34
POLR1B-202ENST00000333990 CYP4F30PQ9H0H9 118 aa6.66□□□□□ -1.34
POLR1B-202ENST00000333990 OXTP01178 125 aa6.65□□□□□ -1.34
POLR1B-202ENST00000333990 PRO0628Q9UI54 55 aa6.64□□□□□ -1.35
POLR1B-202ENST00000333990 A0A087X002 238 aa6.62□□□□□ -1.35
POLR1B-202ENST00000333990 FLG2Q5D862 2391 aaPredicted RBP6.61□□□□□ -1.35
POLR1B-202ENST00000333990 RPS29P62273 56 aaKnown RBP6.61□□□□□ -1.35
POLR1B-202ENST00000333990 HRES1P13985 223 aa6.59□□□□□ -1.35
POLR1B-202ENST00000333990 KRTAP7-1Q8IUC3 87 aa6.58□□□□□ -1.36
POLR1B-202ENST00000333990 SPINK7P58062 85 aa6.57□□□□□ -1.36
POLR1B-202ENST00000333990 KRTAP11-1Q8IUC1 163 aa6.57□□□□□ -1.36
POLR1B-202ENST00000333990 ASB16-AS1Q495Z4 193 aa6.57□□□□□ -1.36
POLR1B-202ENST00000333990 PDZD2O15018 2839 aa6.56□□□□□ -1.36
POLR1B-202ENST00000333990 Q5W150 140 aa6.56□□□□□ -1.36
POLR1B-202ENST00000333990 M0R2T5 61 aa6.55□□□□□ -1.36
POLR1B-202ENST00000333990 KRTAP13-1Q8IUC0 172 aa6.55□□□□□ -1.36
POLR1B-202ENST00000333990 WDFY3Q8IZQ1 3526 aa6.55□□□□□ -1.36
POLR1B-202ENST00000333990 CSAG1Q6PB30 78 aa6.53□□□□□ -1.36
POLR1B-202ENST00000333990 Q8N9P0 234 aaPredicted RBP6.53□□□□□ -1.36
POLR1B-202ENST00000333990 MIR22HGQ0VDD5 57 aa6.53□□□□□ -1.36
POLR1B-202ENST00000333990 Q5XG85 94 aa6.5□□□□□ -1.37
POLR1B-202ENST00000333990 TENM1Q9UKZ4 2725 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms