RNA–Protein interactions for RNA: ENST00000333479.11

KNTC1-201, Transcript of kinetochore associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNTC1, Length 6,975 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-201ENST00000333479 UNC80Q8N2C7 3258 aa2.31□□□□□ -2.04
KNTC1-201ENST00000333479 BRCA2P51587 3418 aa2.3□□□□□ -2.04
KNTC1-201ENST00000333479 PRO2289Q9P1D8 64 aa2.3□□□□□ -2.04
KNTC1-201ENST00000333479 A0A1W2PNM2 257 aa2.3□□□□□ -2.04
KNTC1-201ENST00000333479 M0QZ58 72 aa2.3□□□□□ -2.04
KNTC1-201ENST00000333479 WDFY3Q8IZQ1 3526 aa2.29□□□□□ -2.04
KNTC1-201ENST00000333479 COA5Q86WW8 74 aa2.29□□□□□ -2.04
KNTC1-201ENST00000333479 Q5XG85 94 aa2.29□□□□□ -2.04
KNTC1-201ENST00000333479 RPL37P61927 97 aaKnown RBP2.29□□□□□ -2.04
KNTC1-201ENST00000333479 SPANXA2-OT1Q8N9U9 137 aa2.29□□□□□ -2.04
KNTC1-201ENST00000333479 C20orf166-AS1Q96NR2 134 aa2.29□□□□□ -2.04
KNTC1-201ENST00000333479 MUC4Q99102 2169 aa2.29□□□□□ -2.04
KNTC1-201ENST00000333479 A0A0D9SG42 100 aa2.28□□□□□ -2.04
KNTC1-201ENST00000333479 SZT2Q5T011 3432 aa2.28□□□□□ -2.04
KNTC1-201ENST00000333479 Q75L30 129 aa2.28□□□□□ -2.04
KNTC1-201ENST00000333479 USP24Q9UPU5 2620 aa2.28□□□□□ -2.04
KNTC1-201ENST00000333479 A0A1B0GU33 70 aa2.27□□□□□ -2.05
KNTC1-201ENST00000333479 A0A087WVE0 104 aa2.27□□□□□ -2.05
KNTC1-201ENST00000333479 SETD2Q9BYW2 2564 aaPredicted RBP2.27□□□□□ -2.05
KNTC1-201ENST00000333479 SPRR1AP35321 89 aa2.26□□□□□ -2.05
KNTC1-201ENST00000333479 COL6A3P12111 3177 aa2.26□□□□□ -2.05
KNTC1-201ENST00000333479 NOTCH2NLQ7Z3S9 236 aa2.26□□□□□ -2.05
KNTC1-201ENST00000333479 NBEAQ8NFP9 2946 aa2.26□□□□□ -2.05
KNTC1-201ENST00000333479 ASB16-AS1Q495Z4 193 aa2.26□□□□□ -2.05
KNTC1-201ENST00000333479 CENPFP49454 3210 aa2.26□□□□□ -2.05
KNTC1-201ENST00000333479 Q1T7F1 81 aa2.26□□□□□ -2.05
KNTC1-201ENST00000333479 LAMA2P24043 3122 aaKnown RBP2.26□□□□□ -2.05
KNTC1-201ENST00000333479 TPRXLQ17RH7 258 aa2.25□□□□□ -2.05
KNTC1-201ENST00000333479 DCHS1Q96JQ0 3298 aa2.25□□□□□ -2.05
KNTC1-201ENST00000333479 ACANP16112 2415 aa2.25□□□□□ -2.05
KNTC1-201ENST00000333479 USP9YO00507 2555 aaPredicted RBP2.24□□□□□ -2.05
KNTC1-201ENST00000333479 CR1P17927 2039 aa2.24□□□□□ -2.05
KNTC1-201ENST00000333479 KRTAP1-5Q9BYS1 174 aa2.24□□□□□ -2.05
KNTC1-201ENST00000333479 PRAC1Q96KF2 57 aa2.23□□□□□ -2.05
KNTC1-201ENST00000333479 TRANK1O15050 2925 aa2.23□□□□□ -2.05
KNTC1-201ENST00000333479 GCN1Q92616 2671 aaKnown RBP2.23□□□□□ -2.05
KNTC1-201ENST00000333479 TLN2Q9Y4G6 2542 aa2.23□□□□□ -2.05
KNTC1-201ENST00000333479 Q6ZRN7 208 aaPredicted RBP2.23□□□□□ -2.05
KNTC1-201ENST00000333479 MGAM2Q2M2H8 2515 aa2.23□□□□□ -2.05
KNTC1-201ENST00000333479 CHD9Q3L8U1 2897 aa2.22□□□□□ -2.05
KNTC1-201ENST00000333479 Q5W150 140 aa2.22□□□□□ -2.05
KNTC1-201ENST00000333479 DMDP11532 3685 aa2.22□□□□□ -2.05
KNTC1-201ENST00000333479 MKI67P46013 3256 aaKnown RBP2.22□□□□□ -2.05
KNTC1-201ENST00000333479 CDH23Q9H251 3354 aa2.22□□□□□ -2.05
KNTC1-201ENST00000333479 XIRP2A4UGR9 3374 aa2.22□□□□□ -2.05
KNTC1-201ENST00000333479 KLKP1Q107X0 134 aa2.21□□□□□ -2.06
KNTC1-201ENST00000333479 ADM2Q7Z4H4 148 aa2.2□□□□□ -2.06
KNTC1-201ENST00000333479 RANBP2P49792 3224 aaKnown RBP2.2□□□□□ -2.06
KNTC1-201ENST00000333479 CYSTM1Q9H1C7 97 aa2.2□□□□□ -2.06
KNTC1-201ENST00000333479 MMP24-AS1A0A0U1RRL7 71 aa2.2□□□□□ -2.06
KNTC1-201ENST00000333479 ATRQ13535 2644 aa2.18□□□□□ -2.06
KNTC1-201ENST00000333479 TEP1Q99973 2627 aaKnown RBP2.18□□□□□ -2.06
KNTC1-201ENST00000333479 VCANP13611 3396 aa2.18□□□□□ -2.06
KNTC1-201ENST00000333479 TNP1P09430 55 aa2.18□□□□□ -2.06
KNTC1-201ENST00000333479 A8MUU9 505 aa2.18□□□□□ -2.06
KNTC1-201ENST00000333479 KRTAP10-10P60014 251 aa2.17□□□□□ -2.06
KNTC1-201ENST00000333479 MAST4O15021 2626 aa2.17□□□□□ -2.06
KNTC1-201ENST00000333479 ITPR3Q14573 2671 aa2.17□□□□□ -2.06
KNTC1-201ENST00000333479 KRTAP26-1Q6PEX3 210 aa2.17□□□□□ -2.06
KNTC1-201ENST00000333479 Q8NDZ9 215 aa2.17□□□□□ -2.06
KNTC1-201ENST00000333479 LINC00472Q9H8W2 130 aa2.17□□□□□ -2.06
KNTC1-201ENST00000333479 CFAP46Q8IYW2 2715 aa2.16□□□□□ -2.06
KNTC1-201ENST00000333479 KRTAP23-1A1A580 65 aa2.16□□□□□ -2.06
KNTC1-201ENST00000333479 USP34Q70CQ2 3546 aa2.16□□□□□ -2.06
KNTC1-201ENST00000333479 MGAQ8IWI9 3026 aa2.16□□□□□ -2.06
KNTC1-201ENST00000333479 CHD7Q9P2D1 2997 aa2.15□□□□□ -2.07
KNTC1-201ENST00000333479 A0A0G2JQZ4 141 aa2.14□□□□□ -2.07
KNTC1-201ENST00000333479 A0A087X002 238 aa2.14□□□□□ -2.07
KNTC1-201ENST00000333479 ITPR1Q14643 2758 aa2.14□□□□□ -2.07
KNTC1-201ENST00000333479 ZZEF1O43149 2961 aa2.13□□□□□ -2.07
KNTC1-201ENST00000333479 DNAH12Q6ZR08 3092 aa2.13□□□□□ -2.07
KNTC1-201ENST00000333479 SPEGQ15772 3267 aa2.13□□□□□ -2.07
KNTC1-201ENST00000333479 A0A1B0GVY2 172 aa2.13□□□□□ -2.07
KNTC1-201ENST00000333479 Q8N9P0 234 aaPredicted RBP2.12□□□□□ -2.07
KNTC1-201ENST00000333479 FLNAP21333 2647 aaKnown RBP2.12□□□□□ -2.07
KNTC1-201ENST00000333479 NOTCH1P46531 2555 aa2.12□□□□□ -2.07
KNTC1-201ENST00000333479 ROMO1P60602 79 aa2.12□□□□□ -2.07
KNTC1-201ENST00000333479 XP32Q5T750 250 aa2.12□□□□□ -2.07
KNTC1-201ENST00000333479 UNC79Q9P2D8 2635 aa2.12□□□□□ -2.07
KNTC1-201ENST00000333479 CFAP54Q96N23 3096 aa2.11□□□□□ -2.07
KNTC1-201ENST00000333479 PP632Q6XCG6 107 aa2.11□□□□□ -2.07
KNTC1-201ENST00000333479 FRYQ5TBA9 3013 aa2.11□□□□□ -2.07
KNTC1-201ENST00000333479 FRYLO94915 3013 aa2.11□□□□□ -2.07
KNTC1-201ENST00000333479 LAMA3Q16787 3333 aa2.11□□□□□ -2.07
KNTC1-201ENST00000333479 WDFY4Q6ZS81 3184 aa2.11□□□□□ -2.07
KNTC1-201ENST00000333479 MYO15AQ9UKN7 3530 aa2.11□□□□□ -2.07
KNTC1-201ENST00000333479 Q5VV11 94 aa2.11□□□□□ -2.07
KNTC1-201ENST00000333479 KRTAP10-8P60410 259 aa2.1□□□□□ -2.07
KNTC1-201ENST00000333479 LINC01558Q9Y6Z2 57 aa2.1□□□□□ -2.07
KNTC1-201ENST00000333479 P0C880 135 aa2.1□□□□□ -2.07
KNTC1-201ENST00000333479 KRTAP13-2Q52LG2 175 aa2.1□□□□□ -2.07
KNTC1-201ENST00000333479 SPENQ96T58 3664 aaKnown RBP2.1□□□□□ -2.07
KNTC1-201ENST00000333479 STAB1Q9NY15 2570 aa2.1□□□□□ -2.07
KNTC1-201ENST00000333479 DSPP15924 2871 aaKnown RBP2.09□□□□□ -2.07
KNTC1-201ENST00000333479 DNAH14Q0VDD8 3507 aa2.09□□□□□ -2.08
KNTC1-201ENST00000333479 COL6A5A8TX70 2615 aa2.08□□□□□ -2.08
KNTC1-201ENST00000333479 TEX15Q9BXT5 2789 aa2.08□□□□□ -2.08
KNTC1-201ENST00000333479 TRIOO75962 3097 aa2.08□□□□□ -2.08
KNTC1-201ENST00000333479 CHD6Q8TD26 2715 aa2.08□□□□□ -2.08
KNTC1-201ENST00000333479 CENPEQ02224 2701 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms