RNA–Protein interactions for RNA: ENST00000332687.10

RLIM-201, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLIM, Length 8,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-201ENST00000332687 SPINT4Q6UDR6 99 aa3.18□□□□□ -1.9
RLIM-201ENST00000332687 ITPR3Q14573 2671 aa3.17□□□□□ -1.9
RLIM-201ENST00000332687 STAB1Q9NY15 2570 aa3.17□□□□□ -1.9
RLIM-201ENST00000332687 FAM218AQ96MZ4 157 aa3.17□□□□□ -1.9
RLIM-201ENST00000332687 LITAFQ99732 161 aa3.17□□□□□ -1.9
RLIM-201ENST00000332687 TRIOO75962 3097 aa3.16□□□□□ -1.9
RLIM-201ENST00000332687 KLKP1Q107X0 134 aa3.16□□□□□ -1.9
RLIM-201ENST00000332687 CAMK2N1Q7Z7J9 78 aa3.15□□□□□ -1.9
RLIM-201ENST00000332687 CFAP46Q8IYW2 2715 aa3.15□□□□□ -1.91
RLIM-201ENST00000332687 A0A1W2PNN7 141 aa3.15□□□□□ -1.91
RLIM-201ENST00000332687 ATMQ13315 3056 aa3.15□□□□□ -1.91
RLIM-201ENST00000332687 RPS29P62273 56 aaKnown RBP3.14□□□□□ -1.91
RLIM-201ENST00000332687 HECTD1Q9ULT8 2610 aa3.14□□□□□ -1.91
RLIM-201ENST00000332687 CFAP54Q96N23 3096 aa3.14□□□□□ -1.91
RLIM-201ENST00000332687 ZCCHC13Q8WW36 166 aaKnown RBP3.13□□□□□ -1.91
RLIM-201ENST00000332687 DMAC1Q96GE9 116 aa3.13□□□□□ -1.91
RLIM-201ENST00000332687 SPRR1BP22528 89 aa3.13□□□□□ -1.91
RLIM-201ENST00000332687 Q5VSD8 79 aa3.13□□□□□ -1.91
RLIM-201ENST00000332687 PRO0461Q9UI25 63 aa3.12□□□□□ -1.91
RLIM-201ENST00000332687 S4R3F8 94 aa3.12□□□□□ -1.91
RLIM-201ENST00000332687 ATRQ13535 2644 aa3.12□□□□□ -1.91
RLIM-201ENST00000332687 IGLV8-61A0A075B6I0 122 aa3.1□□□□□ -1.91
RLIM-201ENST00000332687 H7BZZ5 65 aa3.1□□□□□ -1.91
RLIM-201ENST00000332687 PRR26Q8N8Z3 221 aa3.1□□□□□ -1.91
RLIM-201ENST00000332687 SPRR1AP35321 89 aa3.09□□□□□ -1.91
RLIM-201ENST00000332687 PLAC4Q8WY50 150 aa3.09□□□□□ -1.91
RLIM-201ENST00000332687 SMCPP49901 116 aaPredicted RBP3.09□□□□□ -1.92
RLIM-201ENST00000332687 Q1T7F1 81 aa3.08□□□□□ -1.92
RLIM-201ENST00000332687 COL12A1Q99715 3063 aa3.08□□□□□ -1.92
RLIM-201ENST00000332687 BAHCC1Q9P281 2608 aa3.08□□□□□ -1.92
RLIM-201ENST00000332687 A0A1B0GU33 70 aa3.08□□□□□ -1.92
RLIM-201ENST00000332687 LINC01554Q52M75 96 aa3.08□□□□□ -1.92
RLIM-201ENST00000332687 A0A1W2PNM2 257 aa3.07□□□□□ -1.92
RLIM-201ENST00000332687 R4GN34 69 aa3.07□□□□□ -1.92
RLIM-201ENST00000332687 LAMA5O15230 3695 aa3.07□□□□□ -1.92
RLIM-201ENST00000332687 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.06□□□□□ -1.92
RLIM-201ENST00000332687 CSMD1Q96PZ7 3565 aa3.06□□□□□ -1.92
RLIM-201ENST00000332687 ASB16-AS1Q495Z4 193 aa3.05□□□□□ -1.92
RLIM-201ENST00000332687 FRYLO94915 3013 aa3.04□□□□□ -1.92
RLIM-201ENST00000332687 Q8N1X5 172 aa3.04□□□□□ -1.92
RLIM-201ENST00000332687 ANAPC11Q9NYG5 84 aa3.04□□□□□ -1.92
RLIM-201ENST00000332687 Q6ZR54 194 aa3.03□□□□□ -1.92
RLIM-201ENST00000332687 DMDP11532 3685 aa3.03□□□□□ -1.92
RLIM-201ENST00000332687 LCA10Q71F78 164 aa3.03□□□□□ -1.92
RLIM-201ENST00000332687 SPINK7P58062 85 aa3.02□□□□□ -1.93
RLIM-201ENST00000332687 MUC3AQ02505 3323 aa3.02□□□□□ -1.93
RLIM-201ENST00000332687 NBEAL1Q6ZS30 2694 aa3.02□□□□□ -1.93
RLIM-201ENST00000332687 DMBT1Q9UGM3 2413 aaPredicted RBP3.01□□□□□ -1.93
RLIM-201ENST00000332687 KTN1-AS1Q86SY8 53 aa3.01□□□□□ -1.93
RLIM-201ENST00000332687 OCR1Q9BZK8 76 aa3.01□□□□□ -1.93
RLIM-201ENST00000332687 A0A0D9SG42 100 aa3.01□□□□□ -1.93
RLIM-201ENST00000332687 Q5XG85 94 aa3□□□□□ -1.93
RLIM-201ENST00000332687 UNC79Q9P2D8 2635 aa3□□□□□ -1.93
RLIM-201ENST00000332687 TEX15Q9BXT5 2789 aa3□□□□□ -1.93
RLIM-201ENST00000332687 CSMD2Q7Z408 3487 aa3□□□□□ -1.93
RLIM-201ENST00000332687 ITPR2Q14571 2701 aa3□□□□□ -1.93
RLIM-201ENST00000332687 LINC00472Q9H8W2 130 aa2.99□□□□□ -1.93
RLIM-201ENST00000332687 MMP24-AS1A0A0U1RRL7 71 aa2.99□□□□□ -1.93
RLIM-201ENST00000332687 TEP1Q99973 2627 aaKnown RBP2.99□□□□□ -1.93
RLIM-201ENST00000332687 Q75L30 129 aa2.99□□□□□ -1.93
RLIM-201ENST00000332687 KRTAP10-1P60331 282 aa2.99□□□□□ -1.93
RLIM-201ENST00000332687 PRRC2CQ9Y520 2896 aaKnown RBP2.99□□□□□ -1.93
RLIM-201ENST00000332687 C4orf26Q17RF5 130 aa2.98□□□□□ -1.93
RLIM-201ENST00000332687 SETXQ7Z333 2677 aaKnown RBP2.98□□□□□ -1.93
RLIM-201ENST00000332687 TNRC18O15417 2968 aaPredicted RBP2.98□□□□□ -1.93
RLIM-201ENST00000332687 CENPEQ02224 2701 aa2.98□□□□□ -1.93
RLIM-201ENST00000332687 Q5W150 140 aa2.98□□□□□ -1.93
RLIM-201ENST00000332687 SPENQ96T58 3664 aaKnown RBP2.97□□□□□ -1.93
RLIM-201ENST00000332687 H1FX-AS1Q4G0G2 97 aa2.97□□□□□ -1.93
RLIM-201ENST00000332687 LINC01558Q9Y6Z2 57 aa2.97□□□□□ -1.93
RLIM-201ENST00000332687 SMG1Q96Q15 3661 aaKnown RBP2.97□□□□□ -1.93
RLIM-201ENST00000332687 M0QZ58 72 aa2.97□□□□□ -1.93
RLIM-201ENST00000332687 COL6A5A8TX70 2615 aa2.97□□□□□ -1.93
RLIM-201ENST00000332687 RPL37P61927 97 aaKnown RBP2.97□□□□□ -1.93
RLIM-201ENST00000332687 AKAP13Q12802 2813 aa2.97□□□□□ -1.93
RLIM-201ENST00000332687 A0A0A0MQY5 61 aa2.97□□□□□ -1.93
RLIM-201ENST00000332687 NSD1Q96L73 2696 aaPredicted RBP2.96□□□□□ -1.94
RLIM-201ENST00000332687 FRYQ5TBA9 3013 aa2.95□□□□□ -1.94
RLIM-201ENST00000332687 KRTAP26-1Q6PEX3 210 aa2.94□□□□□ -1.94
RLIM-201ENST00000332687 NOTCH2NLQ7Z3S9 236 aa2.94□□□□□ -1.94
RLIM-201ENST00000332687 EIF4EBP3O60516 100 aaPredicted RBP2.93□□□□□ -1.94
RLIM-201ENST00000332687 KRTAP10-2P60368 255 aa2.93□□□□□ -1.94
RLIM-201ENST00000332687 PANO1I0J062 215 aa2.92□□□□□ -1.94
RLIM-201ENST00000332687 DMXL2Q8TDJ6 3036 aa2.92□□□□□ -1.94
RLIM-201ENST00000332687 ROMO1P60602 79 aa2.92□□□□□ -1.94
RLIM-201ENST00000332687 ZNF292O60281 2723 aa2.91□□□□□ -1.94
RLIM-201ENST00000332687 A0A0G2JQZ4 141 aa2.91□□□□□ -1.94
RLIM-201ENST00000332687 KRTAP1-5Q9BYS1 174 aa2.91□□□□□ -1.94
RLIM-201ENST00000332687 SVEP1Q4LDE5 3571 aa2.91□□□□□ -1.94
RLIM-201ENST00000332687 NOTCH1P46531 2555 aa2.9□□□□□ -1.94
RLIM-201ENST00000332687 ADGRG4Q8IZF6 3080 aa2.9□□□□□ -1.95
RLIM-201ENST00000332687 STAB2Q8WWQ8 2551 aa2.89□□□□□ -1.95
RLIM-201ENST00000332687 CHD6Q8TD26 2715 aa2.89□□□□□ -1.95
RLIM-201ENST00000332687 MAP1AP78559 2803 aaPredicted RBP2.89□□□□□ -1.95
RLIM-201ENST00000332687 KRTAP4-16G5E9R7 235 aaPredicted RBP2.89□□□□□ -1.95
RLIM-201ENST00000332687 ADM2Q7Z4H4 148 aa2.88□□□□□ -1.95
RLIM-201ENST00000332687 Q8N9P0 234 aaPredicted RBP2.88□□□□□ -1.95
RLIM-201ENST00000332687 Q6ZRN7 208 aaPredicted RBP2.87□□□□□ -1.95
RLIM-201ENST00000332687 ZFHX3Q15911 3703 aa2.87□□□□□ -1.95
RLIM-201ENST00000332687 GCN1Q92616 2671 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms