RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 TRAPPC2LQ9UL33 140 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 INTS1Q8N201 2190 aaKnown RBP0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 LOC100130705A0A1B0GUX0 176 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 IQCF6A8MYZ5 107 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 ZNF670-ZNF695F2Z2N8 137 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 GYPBP06028 91 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 SPINT3P49223 89 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 SAMD13Q5VXD3 122 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 BAGE3Q86Y29 109 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 Q8N8P6 123 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 FAM213BQ8TBF2 198 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 CIB3Q96Q77 187 aaPredicted RBP0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 APLNQ9ULZ1 77 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 HEATR1Q9H583 2144 aaKnown RBP0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 IGLV5-48A0A075B6I7 105 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 A0A087WXM4 84 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 OOSP1A8MZH6 123 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 HBDP02042 147 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 SPRR1AP35321 89 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 CAV3P56539 151 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 UBE2G1P62253 170 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 SNRPD3P62318 126 aaKnown RBP0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 GNG3P63215 75 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 SERF2P84101 59 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 PRB3Q04118 309 aaPredicted RBP0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 SMIM7Q9BQ49 75 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 AKAP6Q13023 2319 aa0.29□□□□□ -2.36
CCDC144A-201ENST00000328495 UQCRHLA0A096LP55 91 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 H3BNG1 76 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 GABARAPH6UMI1 98 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 EDF1O60869 148 aaKnown RBP0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 TRGC2P03986 189 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 COX8AP10176 69 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 SMIM11AP58511 58 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 DEFB131AP59861 70 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 NMSQ5H8A3 153 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 LINC00643Q86TS7 51 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 LIMD2Q9BT23 127 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 DPY30Q9C005 99 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 MANBALQ9NQG1 85 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 TMEM30CPA0ZSE6 113 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 ATOX1O00244 68 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 NDUFB6O95139 128 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 IGLC3P0DOY3 106 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 G0S2P27469 103 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 SDC2P34741 201 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 DEFA3P59666 94 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 KRTDAPP60985 99 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 Q56UQ5 140 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 COL5A1-AS1Q5SY13 56 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 SPINK6Q6UWN8 80 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 KRTAP8-1Q8IUC2 63 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 SVBPQ8N300 66 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 PRELID3AQ96N28 172 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 RNASE7Q9H1E1 156 aaKnown RBP0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 FREM3P0C091 2139 aa0.28□□□□□ -2.36
CCDC144A-201ENST00000328495 MYOFQ9NZM1 2061 aa0.28□□□□□ -2.37
CCDC144A-201ENST00000328495 TRAV17A0A0B4J275 112 aa0.28□□□□□ -2.37
CCDC144A-201ENST00000328495 DEFB108AA8MXU0 73 aa0.28□□□□□ -2.37
CCDC144A-201ENST00000328495 HCG22E2RYF7 251 aa0.28□□□□□ -2.37
CCDC144A-201ENST00000328495 IGLC2P0DOY2 106 aa0.28□□□□□ -2.37
CCDC144A-201ENST00000328495 GNG5P63218 68 aa0.28□□□□□ -2.37
CCDC144A-201ENST00000328495 C6orf201Q7Z4U5 140 aa0.28□□□□□ -2.37
CCDC144A-201ENST00000328495 WFDC13Q8IUB5 93 aa0.28□□□□□ -2.37
CCDC144A-201ENST00000328495 CDC26Q8NHZ8 85 aa0.28□□□□□ -2.37
CCDC144A-201ENST00000328495 SMIM4Q8WVI0 70 aa0.28□□□□□ -2.37
CCDC144A-201ENST00000328495 BORCS8Q96FH0 119 aa0.28□□□□□ -2.37
CCDC144A-201ENST00000328495 SMIM2Q9BVW6 85 aa0.28□□□□□ -2.37
CCDC144A-201ENST00000328495 SMCO4Q9NRQ5 59 aa0.28□□□□□ -2.37
CCDC144A-201ENST00000328495 CRIPTQ9P021 101 aa0.28□□□□□ -2.37
CCDC144A-201ENST00000328495 LINC00959A0A1B0GUT2 108 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 H7BZZ5 65 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 CCL22O00626 93 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 HSD52Q0P140 79 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 NEDD8Q15843 81 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 RPL7L1Q6DKI1 246 aaKnown RBP0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 BRK1Q8WUW1 75 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 DMAC1Q96GE9 116 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 Q9H521 79 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 MED12LQ86YW9 2145 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 HEATR5BQ9P2D3 2071 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 MAP1LC3B2A6NCE7 125 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 M0R143 59 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 NDUFB1O75438 58 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 MT1BP07438 61 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 GNG10P50151 68 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 S100A7L2Q5SY68 101 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 C20orf78Q9BR46 151 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 UQCR10Q9UDW1 63 aa0.27□□□□□ -2.37
CCDC144A-201ENST00000328495 TMEM14DPA8MWL7 114 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 H3BUA1 57 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 K7ERU9 68 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 CKS2P33552 79 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 TDRG1Q3Y452 100 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 BVES-AS1Q5T3Y7 98 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 SERP2Q8N6R1 65 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 SNHG12Q9BXW3 62 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 LINC00472Q9H8W2 130 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 TRAV12-3A0A0B4J271 114 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms