RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 KRTAP26-1Q6PEX3 210 aa8.82□□□□□ -1
NUP98-201ENST00000324932 Q6ZR54 194 aa8.78□□□□□ -1
NUP98-201ENST00000324932 ATRQ13535 2644 aa8.78□□□□□ -1
NUP98-201ENST00000324932 HECTD1Q9ULT8 2610 aa8.74□□□□□ -1.01
NUP98-201ENST00000324932 KRTAP29-1A8MX34 341 aaPredicted RBP8.72□□□□□ -1.01
NUP98-201ENST00000324932 MAST4O15021 2626 aa8.71□□□□□ -1.02
NUP98-201ENST00000324932 M0QZ58 72 aa8.71□□□□□ -1.02
NUP98-201ENST00000324932 SPATA8Q6RVD6 105 aa8.7□□□□□ -1.02
NUP98-201ENST00000324932 FLG2Q5D862 2391 aaPredicted RBP8.7□□□□□ -1.02
NUP98-201ENST00000324932 KRTAP16-1A8MUX0 517 aa8.7□□□□□ -1.02
NUP98-201ENST00000324932 SEC61BP60468 96 aaKnown RBP8.69□□□□□ -1.02
NUP98-201ENST00000324932 STAB1Q9NY15 2570 aa8.63□□□□□ -1.03
NUP98-201ENST00000324932 KRTAP4-16G5E9R7 235 aaPredicted RBP8.62□□□□□ -1.03
NUP98-201ENST00000324932 A6NN06 94 aa8.62□□□□□ -1.03
NUP98-201ENST00000324932 KRTAP1-5Q9BYS1 174 aa8.61□□□□□ -1.03
NUP98-201ENST00000324932 BPTFQ12830 3046 aa8.59□□□□□ -1.03
NUP98-201ENST00000324932 KRTAP25-1Q3LHN0 102 aa8.59□□□□□ -1.03
NUP98-201ENST00000324932 PANO1I0J062 215 aa8.57□□□□□ -1.04
NUP98-201ENST00000324932 ADM2Q7Z4H4 148 aa8.57□□□□□ -1.04
NUP98-201ENST00000324932 FLNAP21333 2647 aaKnown RBP8.56□□□□□ -1.04
NUP98-201ENST00000324932 PLAC4Q8WY50 150 aa8.51□□□□□ -1.05
NUP98-201ENST00000324932 CENPEQ02224 2701 aa8.51□□□□□ -1.05
NUP98-201ENST00000324932 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
NUP98-201ENST00000324932 GOLGB1Q14789 3259 aaKnown RBP8.5□□□□□ -1.05
NUP98-201ENST00000324932 LCE6AA0A183 80 aa8.49□□□□□ -1.05
NUP98-201ENST00000324932 KRTAP10-1P60331 282 aa8.49□□□□□ -1.05
NUP98-201ENST00000324932 Q5VSD8 79 aa8.47□□□□□ -1.05
NUP98-201ENST00000324932 ITPR3Q14573 2671 aa8.46□□□□□ -1.05
NUP98-201ENST00000324932 NBEAL1Q6ZS30 2694 aa8.46□□□□□ -1.06
NUP98-201ENST00000324932 A0A087X002 238 aa8.44□□□□□ -1.06
NUP98-201ENST00000324932 NOTCH2NLQ7Z3S9 236 aa8.44□□□□□ -1.06
NUP98-201ENST00000324932 KRTAP10-2P60368 255 aa8.42□□□□□ -1.06
NUP98-201ENST00000324932 A8MU10 97 aa8.41□□□□□ -1.06
NUP98-201ENST00000324932 NDUFAF8A1L188 74 aa8.4□□□□□ -1.06
NUP98-201ENST00000324932 HELZ2Q9BYK8 2649 aaKnown RBP8.37□□□□□ -1.07
NUP98-201ENST00000324932 RPS29P62273 56 aaKnown RBP8.36□□□□□ -1.07
NUP98-201ENST00000324932 C20orf166-AS1Q96NR2 134 aa8.35□□□□□ -1.07
NUP98-201ENST00000324932 STAB2Q8WWQ8 2551 aa8.35□□□□□ -1.07
NUP98-201ENST00000324932 UTRNP46939 3433 aa8.33□□□□□ -1.08
NUP98-201ENST00000324932 AKAP13Q12802 2813 aa8.33□□□□□ -1.08
NUP98-201ENST00000324932 A8MUU9 505 aa8.3□□□□□ -1.08
NUP98-201ENST00000324932 CEP350Q5VT06 3117 aa8.29□□□□□ -1.08
NUP98-201ENST00000324932 NOTCH1P46531 2555 aa8.28□□□□□ -1.08
NUP98-201ENST00000324932 CFAP46Q8IYW2 2715 aa8.26□□□□□ -1.09
NUP98-201ENST00000324932 UNC79Q9P2D8 2635 aa8.26□□□□□ -1.09
NUP98-201ENST00000324932 CHD6Q8TD26 2715 aa8.25□□□□□ -1.09
NUP98-201ENST00000324932 KRTAP11-1Q8IUC1 163 aa8.23□□□□□ -1.09
NUP98-201ENST00000324932 TEP1Q99973 2627 aaKnown RBP8.2□□□□□ -1.1
NUP98-201ENST00000324932 DNAH12Q6ZR08 3092 aa8.19□□□□□ -1.1
NUP98-201ENST00000324932 KRTAP7-1Q8IUC3 87 aa8.18□□□□□ -1.1
NUP98-201ENST00000324932 SETXQ7Z333 2677 aaKnown RBP8.18□□□□□ -1.1
NUP98-201ENST00000324932 KRTAP13-1Q8IUC0 172 aa8.16□□□□□ -1.1
NUP98-201ENST00000324932 TNP1P09430 55 aa8.16□□□□□ -1.1
NUP98-201ENST00000324932 ZNF292O60281 2723 aa8.16□□□□□ -1.1
NUP98-201ENST00000324932 CHD7Q9P2D1 2997 aa8.16□□□□□ -1.1
NUP98-201ENST00000324932 GCN1Q92616 2671 aaKnown RBP8.14□□□□□ -1.11
NUP98-201ENST00000324932 KRTAP13-2Q52LG2 175 aa8.14□□□□□ -1.11
NUP98-201ENST00000324932 Q6ZRN7 208 aaPredicted RBP8.13□□□□□ -1.11
NUP98-201ENST00000324932 COL6A5A8TX70 2615 aa8.12□□□□□ -1.11
NUP98-201ENST00000324932 CHD9Q3L8U1 2897 aa8.11□□□□□ -1.11
NUP98-201ENST00000324932 C10orf95Q9H7T3 257 aa8.1□□□□□ -1.11
NUP98-201ENST00000324932 TEX15Q9BXT5 2789 aa8.09□□□□□ -1.11
NUP98-201ENST00000324932 PP632Q6XCG6 107 aa8.06□□□□□ -1.12
NUP98-201ENST00000324932 RANBP2P49792 3224 aaKnown RBP7.99□□□□□ -1.13
NUP98-201ENST00000324932 MAP1AP78559 2803 aaPredicted RBP7.98□□□□□ -1.13
NUP98-201ENST00000324932 UBR5O95071 2799 aaPredicted RBP7.98□□□□□ -1.13
NUP98-201ENST00000324932 HTTP42858 3142 aa7.95□□□□□ -1.14
NUP98-201ENST00000324932 MGAQ8IWI9 3026 aa7.93□□□□□ -1.14
NUP98-201ENST00000324932 NSD1Q96L73 2696 aaPredicted RBP7.93□□□□□ -1.14
NUP98-201ENST00000324932 NBEAL2Q6ZNJ1 2754 aa7.92□□□□□ -1.14
NUP98-201ENST00000324932 P0C880 135 aa7.9□□□□□ -1.14
NUP98-201ENST00000324932 A0A0C4DFX4 3053 aa7.89□□□□□ -1.15
NUP98-201ENST00000324932 TRANK1O15050 2925 aa7.88□□□□□ -1.15
NUP98-201ENST00000324932 BAHCC1Q9P281 2608 aa7.86□□□□□ -1.15
NUP98-201ENST00000324932 DSPP15924 2871 aaKnown RBP7.85□□□□□ -1.15
NUP98-201ENST00000324932 H0YAA0 97 aa7.84□□□□□ -1.15
NUP98-201ENST00000324932 PCNTO95613 3336 aa7.84□□□□□ -1.15
NUP98-201ENST00000324932 CFAP54Q96N23 3096 aa7.83□□□□□ -1.16
NUP98-201ENST00000324932 IGSF10Q6WRI0 2623 aa7.82□□□□□ -1.16
NUP98-201ENST00000324932 C5orf42Q9H799 3197 aa7.81□□□□□ -1.16
NUP98-201ENST00000324932 BRCA2P51587 3418 aa7.81□□□□□ -1.16
NUP98-201ENST00000324932 WDFY4Q6ZS81 3184 aa7.75□□□□□ -1.17
NUP98-201ENST00000324932 KRTAP10-8P60410 259 aa7.75□□□□□ -1.17
NUP98-201ENST00000324932 FLNCQ14315 2725 aa7.74□□□□□ -1.17
NUP98-201ENST00000324932 TRIOO75962 3097 aa7.73□□□□□ -1.17
NUP98-201ENST00000324932 ITPR1Q14643 2758 aa7.69□□□□□ -1.18
NUP98-201ENST00000324932 XP32Q5T750 250 aa7.69□□□□□ -1.18
NUP98-201ENST00000324932 KRTAP1-4P0C5Y4 121 aa7.67□□□□□ -1.18
NUP98-201ENST00000324932 LAMA3Q16787 3333 aa7.63□□□□□ -1.19
NUP98-201ENST00000324932 LAMA2P24043 3122 aaKnown RBP7.6□□□□□ -1.19
NUP98-201ENST00000324932 HIVEP1P15822 2718 aa7.58□□□□□ -1.2
NUP98-201ENST00000324932 NIPBLQ6KC79 2804 aaeCLIP7.57□□□□□ -1.2
NUP98-201ENST00000324932 MKI67P46013 3256 aaKnown RBP7.57□□□□□ -1.2
NUP98-201ENST00000324932 TACC2O95359 2948 aa7.55□□□□□ -1.2
NUP98-201ENST00000324932 FRYQ5TBA9 3013 aa7.54□□□□□ -1.2
NUP98-201ENST00000324932 A0A1B0GVY2 172 aa7.53□□□□□ -1.2
NUP98-201ENST00000324932 KMT2BQ9UMN6 2715 aaPredicted RBP7.52□□□□□ -1.21
NUP98-201ENST00000324932 TPRXLQ17RH7 258 aa7.51□□□□□ -1.21
NUP98-201ENST00000324932 PRUNE2Q8WUY3 3088 aa7.5□□□□□ -1.21
NUP98-201ENST00000324932 ITPR2Q14571 2701 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 345.3 ms