RNA–Protein interactions for RNA: ENST00000324022.14

GYPA-201, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPA, Length 751 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-201ENST00000324022 CSPG4Q6UVK1 2322 aa1.9□□□□□ -2.11
GYPA-201ENST00000324022 LAMA2P24043 3122 aaKnown RBP1.9□□□□□ -2.11
GYPA-201ENST00000324022 CFAP47Q6ZTR5 3102 aa1.89□□□□□ -2.11
GYPA-201ENST00000324022 CFAP54Q96N23 3096 aa1.89□□□□□ -2.11
GYPA-201ENST00000324022 NOTCH2NLQ7Z3S9 236 aa1.89□□□□□ -2.11
GYPA-201ENST00000324022 NBASA2RRP1 2371 aa1.89□□□□□ -2.11
GYPA-201ENST00000324022 HRNRQ86YZ3 2850 aaPredicted RBP1.89□□□□□ -2.11
GYPA-201ENST00000324022 NCOR2Q9Y618 2525 aa1.89□□□□□ -2.11
GYPA-201ENST00000324022 C2CD3Q4AC94 2353 aa1.88□□□□□ -2.11
GYPA-201ENST00000324022 FRYLO94915 3013 aa1.88□□□□□ -2.11
GYPA-201ENST00000324022 ZFHX3Q15911 3703 aa1.88□□□□□ -2.11
GYPA-201ENST00000324022 ZNF861PO60384 105 aa1.88□□□□□ -2.11
GYPA-201ENST00000324022 LY6G6CO95867 125 aa1.88□□□□□ -2.11
GYPA-201ENST00000324022 IGLV7-43P04211 117 aa1.88□□□□□ -2.11
GYPA-201ENST00000324022 Q96NJ1 140 aa1.88□□□□□ -2.11
GYPA-201ENST00000324022 AKAP13Q12802 2813 aa1.88□□□□□ -2.11
GYPA-201ENST00000324022 VPS13AQ96RL7 3174 aa1.88□□□□□ -2.11
GYPA-201ENST00000324022 TACC2O95359 2948 aa1.87□□□□□ -2.11
GYPA-201ENST00000324022 Q5W150 140 aa1.87□□□□□ -2.11
GYPA-201ENST00000324022 SPINK6Q6UWN8 80 aa1.87□□□□□ -2.11
GYPA-201ENST00000324022 KRTAP7-1Q8IUC3 87 aa1.87□□□□□ -2.11
GYPA-201ENST00000324022 CREBBPQ92793 2442 aa1.87□□□□□ -2.11
GYPA-201ENST00000324022 ATRXP46100 2492 aa1.86□□□□□ -2.11
GYPA-201ENST00000324022 ANKRD11Q6UB99 2663 aaPredicted RBP1.86□□□□□ -2.11
GYPA-201ENST00000324022 IGKV2-30P06310 120 aa1.86□□□□□ -2.11
GYPA-201ENST00000324022 UBE2DNLQ8IWF7 75 aa1.86□□□□□ -2.11
GYPA-201ENST00000324022 DMXL2Q8TDJ6 3036 aa1.86□□□□□ -2.11
GYPA-201ENST00000324022 LRBAP50851 2863 aa1.86□□□□□ -2.11
GYPA-201ENST00000324022 ANKRD17O75179 2603 aaKnown RBP1.86□□□□□ -2.11
GYPA-201ENST00000324022 A8MUU9 505 aa1.85□□□□□ -2.11
GYPA-201ENST00000324022 INAFM1C9JVW0 142 aa1.85□□□□□ -2.11
GYPA-201ENST00000324022 LINC00483Q53H64 154 aa1.85□□□□□ -2.11
GYPA-201ENST00000324022 SPINT4Q6UDR6 99 aa1.85□□□□□ -2.11
GYPA-201ENST00000324022 MAP1AP78559 2803 aaPredicted RBP1.85□□□□□ -2.11
GYPA-201ENST00000324022 IGKV2D-30A0A075B6S6 120 aa1.84□□□□□ -2.11
GYPA-201ENST00000324022 IGLV5-52A0A0A0MRZ9 124 aa1.84□□□□□ -2.11
GYPA-201ENST00000324022 NUPR2A6NF83 97 aa1.84□□□□□ -2.11
GYPA-201ENST00000324022 KRTAP13-3Q3SY46 172 aa1.84□□□□□ -2.11
GYPA-201ENST00000324022 CASC10Q5T4H9 136 aa1.84□□□□□ -2.11
GYPA-201ENST00000324022 XIRP2A4UGR9 3374 aa1.84□□□□□ -2.11
GYPA-201ENST00000324022 TLN1Q9Y490 2541 aaKnown RBP1.83□□□□□ -2.12
GYPA-201ENST00000324022 DCHS2Q6V1P9 2916 aa1.83□□□□□ -2.12
GYPA-201ENST00000324022 A0A0A0MQY5 61 aa1.83□□□□□ -2.12
GYPA-201ENST00000324022 CHTF8P0CG12 524 aa1.83□□□□□ -2.12
GYPA-201ENST00000324022 SSBP3-AS1Q7Z2R9 100 aa1.83□□□□□ -2.12
GYPA-201ENST00000324022 ANAPC11Q9NYG5 84 aa1.83□□□□□ -2.12
GYPA-201ENST00000324022 KMT2BQ9UMN6 2715 aaPredicted RBP1.83□□□□□ -2.12
GYPA-201ENST00000324022 PTPN13Q12923 2485 aa1.83□□□□□ -2.12
GYPA-201ENST00000324022 PRUNE2Q8WUY3 3088 aa1.83□□□□□ -2.12
GYPA-201ENST00000324022 TLN2Q9Y4G6 2542 aa1.83□□□□□ -2.12
GYPA-201ENST00000324022 CEP295Q9C0D2 2601 aa1.83□□□□□ -2.12
GYPA-201ENST00000324022 FREM2Q5SZK8 3169 aa1.82□□□□□ -2.12
GYPA-201ENST00000324022 SPTBN4Q9H254 2564 aa1.82□□□□□ -2.12
GYPA-201ENST00000324022 A0A1B0GU33 70 aa1.82□□□□□ -2.12
GYPA-201ENST00000324022 K7EIL1 84 aa1.82□□□□□ -2.12
GYPA-201ENST00000324022 SPINK1P00995 79 aa1.82□□□□□ -2.12
GYPA-201ENST00000324022 KRTAP10-3P60369 221 aa1.82□□□□□ -2.12
GYPA-201ENST00000324022 KRTAP13-1Q8IUC0 172 aa1.82□□□□□ -2.12
GYPA-201ENST00000324022 LAMA3Q16787 3333 aa1.81□□□□□ -2.12
GYPA-201ENST00000324022 WDFY4Q6ZS81 3184 aa1.81□□□□□ -2.12
GYPA-201ENST00000324022 CHD6Q8TD26 2715 aa1.81□□□□□ -2.12
GYPA-201ENST00000324022 KRTAP16-1A8MUX0 517 aa1.81□□□□□ -2.12
GYPA-201ENST00000324022 PANO1I0J062 215 aa1.81□□□□□ -2.12
GYPA-201ENST00000324022 KRTAP10-8P60410 259 aa1.81□□□□□ -2.12
GYPA-201ENST00000324022 H1FX-AS1Q4G0G2 97 aa1.81□□□□□ -2.12
GYPA-201ENST00000324022 LINC00304Q8N9R0 145 aa1.81□□□□□ -2.12
GYPA-201ENST00000324022 CIRBP-AS1Q8TBR5 109 aa1.81□□□□□ -2.12
GYPA-201ENST00000324022 ALMS1Q8TCU4 4167 aa1.81□□□□□ -2.12
GYPA-201ENST00000324022 FN1P02751 2386 aaKnown RBP1.8□□□□□ -2.12
GYPA-201ENST00000324022 GVINP1Q7Z2Y8 2422 aa1.8□□□□□ -2.12
GYPA-201ENST00000324022 ITPR1Q14643 2758 aa1.8□□□□□ -2.12
GYPA-201ENST00000324022 SPTBN5Q9NRC6 3674 aaKnown RBP1.79□□□□□ -2.12
GYPA-201ENST00000324022 LCE1CQ5T751 118 aa1.79□□□□□ -2.12
GYPA-201ENST00000324022 LCE1BQ5T7P3 118 aa1.79□□□□□ -2.12
GYPA-201ENST00000324022 KRTAP11-1Q8IUC1 163 aa1.79□□□□□ -2.12
GYPA-201ENST00000324022 C20orf166-AS1Q96NR2 134 aa1.79□□□□□ -2.12
GYPA-201ENST00000324022 CRIPTQ9P021 101 aa1.79□□□□□ -2.12
GYPA-201ENST00000324022 PSORS1C2Q9UIG4 136 aa1.79□□□□□ -2.12
GYPA-201ENST00000324022 JMJD1CQ15652 2540 aa1.79□□□□□ -2.12
GYPA-201ENST00000324022 TENM2Q9NT68 2774 aa1.79□□□□□ -2.12
GYPA-201ENST00000324022 CELSR2Q9HCU4 2923 aa1.79□□□□□ -2.12
GYPA-201ENST00000324022 DCHS1Q96JQ0 3298 aa1.79□□□□□ -2.12
GYPA-201ENST00000324022 USP34Q70CQ2 3546 aa1.78□□□□□ -2.12
GYPA-201ENST00000324022 SETXQ7Z333 2677 aaKnown RBP1.78□□□□□ -2.12
GYPA-201ENST00000324022 H0YAA0 97 aa1.78□□□□□ -2.12
GYPA-201ENST00000324022 P0C880 135 aa1.78□□□□□ -2.12
GYPA-201ENST00000324022 Q6ZSA8 131 aa1.78□□□□□ -2.12
GYPA-201ENST00000324022 KRTAP5-5Q701N2 237 aaPredicted RBP1.78□□□□□ -2.12
GYPA-201ENST00000324022 SPACA4Q8TDM5 124 aa1.78□□□□□ -2.12
GYPA-201ENST00000324022 CDH23Q9H251 3354 aa1.78□□□□□ -2.12
GYPA-201ENST00000324022 CELSR3Q9NYQ7 3312 aa1.78□□□□□ -2.13
GYPA-201ENST00000324022 NDUFAF8A1L188 74 aa1.77□□□□□ -2.13
GYPA-201ENST00000324022 COX6B2Q6YFQ2 88 aa1.77□□□□□ -2.13
GYPA-201ENST00000324022 WDFY3Q8IZQ1 3526 aa1.77□□□□□ -2.13
GYPA-201ENST00000324022 HIVEP2P31629 2446 aa1.77□□□□□ -2.13
GYPA-201ENST00000324022 MYO9AB2RTY4 2548 aa1.76□□□□□ -2.13
GYPA-201ENST00000324022 MUC6Q6W4X9 2439 aa1.76□□□□□ -2.13
GYPA-201ENST00000324022 RPL37P61927 97 aaKnown RBP1.76□□□□□ -2.13
GYPA-201ENST00000324022 LUZP6Q538Z0 58 aa1.76□□□□□ -2.13
GYPA-201ENST00000324022 SPEGQ15772 3267 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms