RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 COX6B2Q6YFQ2 88 aa6.26□□□□□ -1.41
COL12A1-201ENST00000322507 J3QL48 77 aa6.26□□□□□ -1.41
COL12A1-201ENST00000322507 PSORS1C2Q9UIG4 136 aa6.26□□□□□ -1.41
COL12A1-201ENST00000322507 BAHCC1Q9P281 2608 aa6.25□□□□□ -1.41
COL12A1-201ENST00000322507 RPL37P61927 97 aaKnown RBP6.25□□□□□ -1.41
COL12A1-201ENST00000322507 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
COL12A1-201ENST00000322507 H1FX-AS1Q4G0G2 97 aa6.24□□□□□ -1.41
COL12A1-201ENST00000322507 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.24□□□□□ -1.41
COL12A1-201ENST00000322507 SPRR4Q96PI1 79 aa6.23□□□□□ -1.41
COL12A1-201ENST00000322507 Q8N1X5 172 aa6.23□□□□□ -1.41
COL12A1-201ENST00000322507 NSD1Q96L73 2696 aaPredicted RBP6.23□□□□□ -1.41
COL12A1-201ENST00000322507 A0A087WTM6 91 aa6.23□□□□□ -1.41
COL12A1-201ENST00000322507 A6NN06 94 aa6.23□□□□□ -1.41
COL12A1-201ENST00000322507 PLAC4Q8WY50 150 aa6.21□□□□□ -1.41
COL12A1-201ENST00000322507 TRANK1O15050 2925 aa6.19□□□□□ -1.42
COL12A1-201ENST00000322507 GIG44P09565 113 aaPredicted RBP6.18□□□□□ -1.42
COL12A1-201ENST00000322507 K7EIL1 84 aa6.17□□□□□ -1.42
COL12A1-201ENST00000322507 A0A096LNT2 108 aa6.16□□□□□ -1.42
COL12A1-201ENST00000322507 A0A0C4DFX4 3053 aa6.15□□□□□ -1.43
COL12A1-201ENST00000322507 SPATA8Q6RVD6 105 aa6.15□□□□□ -1.43
COL12A1-201ENST00000322507 APCP25054 2843 aa6.14□□□□□ -1.43
COL12A1-201ENST00000322507 MKI67P46013 3256 aaKnown RBP6.14□□□□□ -1.43
COL12A1-201ENST00000322507 S4R3F8 94 aa6.13□□□□□ -1.43
COL12A1-201ENST00000322507 KRTAP10-11P60412 298 aa6.13□□□□□ -1.43
COL12A1-201ENST00000322507 LAMA2P24043 3122 aaKnown RBP6.12□□□□□ -1.43
COL12A1-201ENST00000322507 XIRP2A4UGR9 3374 aa6.11□□□□□ -1.43
COL12A1-201ENST00000322507 A0A1W2PNM2 257 aa6.11□□□□□ -1.43
COL12A1-201ENST00000322507 Q6ZR54 194 aa6.1□□□□□ -1.43
COL12A1-201ENST00000322507 OXTP01178 125 aa6.1□□□□□ -1.43
COL12A1-201ENST00000322507 NOTCH2NLQ7Z3S9 236 aa6.09□□□□□ -1.43
COL12A1-201ENST00000322507 CYSTM1Q9H1C7 97 aa6.08□□□□□ -1.44
COL12A1-201ENST00000322507 CFAP54Q96N23 3096 aa6.08□□□□□ -1.44
COL12A1-201ENST00000322507 NBEAL2Q6ZNJ1 2754 aa6.08□□□□□ -1.44
COL12A1-201ENST00000322507 C9orf92A6NGG3 77 aa6.06□□□□□ -1.44
COL12A1-201ENST00000322507 UTP20O75691 2785 aaKnown RBP6.06□□□□□ -1.44
COL12A1-201ENST00000322507 PP632Q6XCG6 107 aa6.05□□□□□ -1.44
COL12A1-201ENST00000322507 BRCA2P51587 3418 aa6.05□□□□□ -1.44
COL12A1-201ENST00000322507 UBR5O95071 2799 aaPredicted RBP6.05□□□□□ -1.44
COL12A1-201ENST00000322507 Q6ZSA8 131 aa6.05□□□□□ -1.44
COL12A1-201ENST00000322507 A0A1W2PNN7 141 aa6.04□□□□□ -1.44
COL12A1-201ENST00000322507 DSPP15924 2871 aaKnown RBP6.04□□□□□ -1.44
COL12A1-201ENST00000322507 R4GN34 69 aa6.04□□□□□ -1.44
COL12A1-201ENST00000322507 IGSF10Q6WRI0 2623 aa6.03□□□□□ -1.44
COL12A1-201ENST00000322507 C20orf166-AS1Q96NR2 134 aa6.03□□□□□ -1.44
COL12A1-201ENST00000322507 MGAQ8IWI9 3026 aa6.01□□□□□ -1.45
COL12A1-201ENST00000322507 SPRR1AP35321 89 aa6.01□□□□□ -1.45
COL12A1-201ENST00000322507 ZCCHC13Q8WW36 166 aaKnown RBP6□□□□□ -1.45
COL12A1-201ENST00000322507 DNAH14Q0VDD8 3507 aa6□□□□□ -1.45
COL12A1-201ENST00000322507 ITPR1Q14643 2758 aa6□□□□□ -1.45
COL12A1-201ENST00000322507 MMP24-AS1A0A0U1RRL7 71 aa5.99□□□□□ -1.45
COL12A1-201ENST00000322507 SPRR1BP22528 89 aa5.99□□□□□ -1.45
COL12A1-201ENST00000322507 PLAC8Q9NZF1 115 aa5.98□□□□□ -1.45
COL12A1-201ENST00000322507 CHD7Q9P2D1 2997 aa5.98□□□□□ -1.45
COL12A1-201ENST00000322507 Q5W150 140 aa5.97□□□□□ -1.45
COL12A1-201ENST00000322507 FLNCQ14315 2725 aa5.96□□□□□ -1.45
COL12A1-201ENST00000322507 CASC10Q5T4H9 136 aa5.96□□□□□ -1.46
COL12A1-201ENST00000322507 KRTAP10-3P60369 221 aa5.94□□□□□ -1.46
COL12A1-201ENST00000322507 CELSR3Q9NYQ7 3312 aa5.93□□□□□ -1.46
COL12A1-201ENST00000322507 KRTAP1-3Q8IUG1 177 aa5.93□□□□□ -1.46
COL12A1-201ENST00000322507 LAMA3Q16787 3333 aa5.93□□□□□ -1.46
COL12A1-201ENST00000322507 ANAPC11Q9NYG5 84 aa5.93□□□□□ -1.46
COL12A1-201ENST00000322507 LINC00472Q9H8W2 130 aa5.92□□□□□ -1.46
COL12A1-201ENST00000322507 CDH23Q9H251 3354 aa5.92□□□□□ -1.46
COL12A1-201ENST00000322507 Q8NDZ9 215 aa5.91□□□□□ -1.46
COL12A1-201ENST00000322507 TRIOO75962 3097 aa5.9□□□□□ -1.46
COL12A1-201ENST00000322507 A0A0G2JQZ4 141 aa5.89□□□□□ -1.47
COL12A1-201ENST00000322507 KRTAP1-1Q07627 177 aa5.89□□□□□ -1.47
COL12A1-201ENST00000322507 SMR3BP02814 79 aaPredicted RBP5.89□□□□□ -1.47
COL12A1-201ENST00000322507 PANO1I0J062 215 aa5.89□□□□□ -1.47
COL12A1-201ENST00000322507 FRYQ5TBA9 3013 aa5.88□□□□□ -1.47
COL12A1-201ENST00000322507 FRYLO94915 3013 aa5.88□□□□□ -1.47
COL12A1-201ENST00000322507 NIPBLQ6KC79 2804 aaeCLIP5.88□□□□□ -1.47
COL12A1-201ENST00000322507 A8MUU9 505 aa5.87□□□□□ -1.47
COL12A1-201ENST00000322507 M0QZ58 72 aa5.87□□□□□ -1.47
COL12A1-201ENST00000322507 CHD9Q3L8U1 2897 aa5.86□□□□□ -1.47
COL12A1-201ENST00000322507 VPS13AQ96RL7 3174 aa5.85□□□□□ -1.47
COL12A1-201ENST00000322507 M0R2T5 61 aa5.83□□□□□ -1.48
COL12A1-201ENST00000322507 PRUNE2Q8WUY3 3088 aa5.83□□□□□ -1.48
COL12A1-201ENST00000322507 RANBP2P49792 3224 aaKnown RBP5.83□□□□□ -1.48
COL12A1-201ENST00000322507 HTTP42858 3142 aa5.82□□□□□ -1.48
COL12A1-201ENST00000322507 HIVEP1P15822 2718 aa5.81□□□□□ -1.48
COL12A1-201ENST00000322507 REV3LO60673 3130 aa5.81□□□□□ -1.48
COL12A1-201ENST00000322507 ADM2Q7Z4H4 148 aa5.81□□□□□ -1.48
COL12A1-201ENST00000322507 C10orf95Q9H7T3 257 aa5.81□□□□□ -1.48
COL12A1-201ENST00000322507 RPS29P62273 56 aaKnown RBP5.8□□□□□ -1.48
COL12A1-201ENST00000322507 KRTAP11-1Q8IUC1 163 aa5.77□□□□□ -1.49
COL12A1-201ENST00000322507 VCANP13611 3396 aa5.77□□□□□ -1.49
COL12A1-201ENST00000322507 UNC80Q8N2C7 3258 aa5.76□□□□□ -1.49
COL12A1-201ENST00000322507 SZT2Q5T011 3432 aa5.76□□□□□ -1.49
COL12A1-201ENST00000322507 LRBAP50851 2863 aa5.75□□□□□ -1.49
COL12A1-201ENST00000322507 LCE6AA0A183 80 aa5.75□□□□□ -1.49
COL12A1-201ENST00000322507 KALRNO60229 2985 aa5.74□□□□□ -1.49
COL12A1-201ENST00000322507 NF1P21359 2839 aa5.74□□□□□ -1.49
COL12A1-201ENST00000322507 FREM2Q5SZK8 3169 aa5.73□□□□□ -1.49
COL12A1-201ENST00000322507 KRTAP26-1Q6PEX3 210 aa5.72□□□□□ -1.49
COL12A1-201ENST00000322507 LAMA1P25391 3075 aa5.71□□□□□ -1.49
COL12A1-201ENST00000322507 ASH1LQ9NR48 2969 aaKnown RBP5.7□□□□□ -1.5
COL12A1-201ENST00000322507 KRTAP4-16G5E9R7 235 aaPredicted RBP5.7□□□□□ -1.5
COL12A1-201ENST00000322507 TENM1Q9UKZ4 2725 aa5.7□□□□□ -1.5
COL12A1-201ENST00000322507 WDFY4Q6ZS81 3184 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms