RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 HCG22E2RYF7 251 aa7.01□□□□□ -1.29
TOP3A-201ENST00000321105 IGFL1Q6UW32 110 aa7.01□□□□□ -1.29
TOP3A-201ENST00000321105 SPACA4Q8TDM5 124 aa7.01□□□□□ -1.29
TOP3A-201ENST00000321105 SMR3BP02814 79 aaPredicted RBP7.01□□□□□ -1.29
TOP3A-201ENST00000321105 TRBV7-4A0A0J9YYF1 115 aa7□□□□□ -1.29
TOP3A-201ENST00000321105 WWC2-AS2Q96NR7 200 aa7□□□□□ -1.29
TOP3A-201ENST00000321105 A0A1W2PNM2 257 aa7□□□□□ -1.29
TOP3A-201ENST00000321105 BCE1O60756 84 aa7□□□□□ -1.29
TOP3A-201ENST00000321105 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7□□□□□ -1.29
TOP3A-201ENST00000321105 CHKB-CPT1BH3BT56 60 aa7□□□□□ -1.29
TOP3A-201ENST00000321105 KRTAP26-1Q6PEX3 210 aa7□□□□□ -1.29
TOP3A-201ENST00000321105 BRK1Q8WUW1 75 aa6.99□□□□□ -1.29
TOP3A-201ENST00000321105 TNP2Q05952 138 aa6.99□□□□□ -1.29
TOP3A-201ENST00000321105 FLG2Q5D862 2391 aaPredicted RBP6.98□□□□□ -1.29
TOP3A-201ENST00000321105 TLX1NBP0CAT3 122 aa6.98□□□□□ -1.29
TOP3A-201ENST00000321105 OBSCN-AS1Q96MR7 158 aa6.97□□□□□ -1.29
TOP3A-201ENST00000321105 PSORS1C2Q9UIG4 136 aa6.97□□□□□ -1.29
TOP3A-201ENST00000321105 H0Y9P7 68 aa6.96□□□□□ -1.3
TOP3A-201ENST00000321105 A0A0U1RQV1 116 aa6.94□□□□□ -1.3
TOP3A-201ENST00000321105 CRYGAP11844 174 aa6.94□□□□□ -1.3
TOP3A-201ENST00000321105 CNBPP62633 177 aaKnown RBP6.93□□□□□ -1.3
TOP3A-201ENST00000321105 NDUFC1O43677 76 aa6.92□□□□□ -1.3
TOP3A-201ENST00000321105 PANO1I0J062 215 aa6.91□□□□□ -1.3
TOP3A-201ENST00000321105 hDV103S1A0JD37 113 aa6.91□□□□□ -1.3
TOP3A-201ENST00000321105 C1orf64Q8NEQ6 169 aa6.91□□□□□ -1.3
TOP3A-201ENST00000321105 PSPHP1O15172 72 aa6.9□□□□□ -1.3
TOP3A-201ENST00000321105 PLA2G2DQ9UNK4 145 aa6.89□□□□□ -1.31
TOP3A-201ENST00000321105 PLA2G1BP04054 148 aaKnown RBP6.89□□□□□ -1.31
TOP3A-201ENST00000321105 SPTSSBQ8NFR3 76 aa6.89□□□□□ -1.31
TOP3A-201ENST00000321105 ZNF861PO60384 105 aa6.88□□□□□ -1.31
TOP3A-201ENST00000321105 IGKV2D-30A0A075B6S6 120 aa6.88□□□□□ -1.31
TOP3A-201ENST00000321105 IGKV2-30P06310 120 aa6.88□□□□□ -1.31
TOP3A-201ENST00000321105 SPINK1P00995 79 aa6.87□□□□□ -1.31
TOP3A-201ENST00000321105 IGLV5-48A0A075B6I7 105 aa6.86□□□□□ -1.31
TOP3A-201ENST00000321105 ANK3Q12955 4377 aaKnown RBP6.86□□□□□ -1.31
TOP3A-201ENST00000321105 LINC01600Q96MT4 127 aa6.86□□□□□ -1.31
TOP3A-201ENST00000321105 CYSTM1Q9H1C7 97 aa6.86□□□□□ -1.31
TOP3A-201ENST00000321105 TYMSOSQ8TAI1 123 aa6.85□□□□□ -1.31
TOP3A-201ENST00000321105 SERP1Q9Y6X1 66 aa6.84□□□□□ -1.31
TOP3A-201ENST00000321105 C4orf26Q17RF5 130 aa6.83□□□□□ -1.32
TOP3A-201ENST00000321105 SPRR4Q96PI1 79 aa6.83□□□□□ -1.32
TOP3A-201ENST00000321105 SMIM26A0A096LP01 95 aa6.83□□□□□ -1.32
TOP3A-201ENST00000321105 IGLV5-37A0A075B6J1 123 aa6.82□□□□□ -1.32
TOP3A-201ENST00000321105 A8MWP4 228 aa6.82□□□□□ -1.32
TOP3A-201ENST00000321105 IGLV7-43P04211 117 aa6.81□□□□□ -1.32
TOP3A-201ENST00000321105 KRTAP11-1Q8IUC1 163 aa6.81□□□□□ -1.32
TOP3A-201ENST00000321105 PRR15Q8IV56 129 aa6.81□□□□□ -1.32
TOP3A-201ENST00000321105 SPRR1AP35321 89 aa6.8□□□□□ -1.32
TOP3A-201ENST00000321105 DSCR10P59022 87 aa6.8□□□□□ -1.32
TOP3A-201ENST00000321105 CSMD3Q7Z407 3707 aa6.8□□□□□ -1.32
TOP3A-201ENST00000321105 TRAV22A0A0B4J277 110 aa6.8□□□□□ -1.32
TOP3A-201ENST00000321105 KRTAP7-1Q8IUC3 87 aa6.79□□□□□ -1.32
TOP3A-201ENST00000321105 KRTAP10-2P60368 255 aa6.79□□□□□ -1.32
TOP3A-201ENST00000321105 H7BZZ5 65 aa6.78□□□□□ -1.32
TOP3A-201ENST00000321105 A0A1B0GW54 56 aa6.78□□□□□ -1.32
TOP3A-201ENST00000321105 A6NED7 52 aa6.78□□□□□ -1.32
TOP3A-201ENST00000321105 ATP5EP56381 51 aaPredicted RBP6.77□□□□□ -1.33
TOP3A-201ENST00000321105 FBN3Q75N90 2809 aa6.77□□□□□ -1.33
TOP3A-201ENST00000321105 PRR15LQ9BU68 103 aa6.77□□□□□ -1.33
TOP3A-201ENST00000321105 LINC00313P59037 77 aa6.76□□□□□ -1.33
TOP3A-201ENST00000321105 Q96NJ1 140 aa6.75□□□□□ -1.33
TOP3A-201ENST00000321105 C8orf17Q9NRJ1 99 aa6.74□□□□□ -1.33
TOP3A-201ENST00000321105 COL7A1Q02388 2944 aa6.74□□□□□ -1.33
TOP3A-201ENST00000321105 C9orf92A6NGG3 77 aa6.74□□□□□ -1.33
TOP3A-201ENST00000321105 SPAG11AQ6PDA7 123 aa6.73□□□□□ -1.33
TOP3A-201ENST00000321105 KLKP1Q107X0 134 aa6.73□□□□□ -1.33
TOP3A-201ENST00000321105 LIMD2Q9BT23 127 aa6.73□□□□□ -1.33
TOP3A-201ENST00000321105 KRTAP4-16G5E9R7 235 aaPredicted RBP6.72□□□□□ -1.33
TOP3A-201ENST00000321105 MRPL34Q9BQ48 92 aaKnown RBP6.72□□□□□ -1.33
TOP3A-201ENST00000321105 A0A1B0GVX0 72 aa6.71□□□□□ -1.34
TOP3A-201ENST00000321105 OCR1Q9BZK8 76 aa6.71□□□□□ -1.34
TOP3A-201ENST00000321105 KRTAP10-1P60331 282 aa6.69□□□□□ -1.34
TOP3A-201ENST00000321105 PRR26Q8N8Z3 221 aa6.69□□□□□ -1.34
TOP3A-201ENST00000321105 FAM229AH3BQW9 127 aa6.68□□□□□ -1.34
TOP3A-201ENST00000321105 SEC61GP60059 68 aa6.68□□□□□ -1.34
TOP3A-201ENST00000321105 TP53AIP1Q9HCN2 124 aa6.68□□□□□ -1.34
TOP3A-201ENST00000321105 IGLV8-61A0A075B6I0 122 aa6.67□□□□□ -1.34
TOP3A-201ENST00000321105 SSBP3-AS1Q7Z2R9 100 aa6.67□□□□□ -1.34
TOP3A-201ENST00000321105 PLAC8Q9NZF1 115 aa6.66□□□□□ -1.34
TOP3A-201ENST00000321105 Q6ZRN7 208 aaPredicted RBP6.66□□□□□ -1.34
TOP3A-201ENST00000321105 LINC00304Q8N9R0 145 aa6.65□□□□□ -1.34
TOP3A-201ENST00000321105 RPS28P62857 69 aaKnown RBP6.65□□□□□ -1.35
TOP3A-201ENST00000321105 C7orf65Q6ZTY9 151 aa6.64□□□□□ -1.35
TOP3A-201ENST00000321105 A8MUN3 132 aa6.63□□□□□ -1.35
TOP3A-201ENST00000321105 Q6ZR54 194 aa6.63□□□□□ -1.35
TOP3A-201ENST00000321105 V9GYY9 64 aa6.62□□□□□ -1.35
TOP3A-201ENST00000321105 AKAP9Q99996 3911 aa6.61□□□□□ -1.35
TOP3A-201ENST00000321105 LINC00472Q9H8W2 130 aa6.6□□□□□ -1.35
TOP3A-201ENST00000321105 COA5Q86WW8 74 aa6.59□□□□□ -1.35
TOP3A-201ENST00000321105 MEGF8Q7Z7M0 2845 aa6.59□□□□□ -1.35
TOP3A-201ENST00000321105 A0A087X002 238 aa6.59□□□□□ -1.36
TOP3A-201ENST00000321105 PMAIP1Q13794 54 aa6.59□□□□□ -1.36
TOP3A-201ENST00000321105 MMP24-AS1A0A0U1RRL7 71 aa6.57□□□□□ -1.36
TOP3A-201ENST00000321105 SPRR1BP22528 89 aa6.56□□□□□ -1.36
TOP3A-201ENST00000321105 NOTCH2NLQ7Z3S9 236 aa6.56□□□□□ -1.36
TOP3A-201ENST00000321105 Q8N1X5 172 aa6.56□□□□□ -1.36
TOP3A-201ENST00000321105 LINC00336Q6ZUF6 198 aa6.56□□□□□ -1.36
TOP3A-201ENST00000321105 ACYP2P14621 99 aa6.55□□□□□ -1.36
TOP3A-201ENST00000321105 H3BPC8 53 aa6.55□□□□□ -1.36
TOP3A-201ENST00000321105 FAM229BQ4G0N7 80 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms