RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 SPTBN5Q9NRC6 3674 aaKnown RBP8.59□□□□□ -1.03
RFFL-201ENST00000315249 DMXL2Q8TDJ6 3036 aa8.59□□□□□ -1.03
RFFL-201ENST00000315249 PRR15Q8IV56 129 aa8.59□□□□□ -1.03
RFFL-201ENST00000315249 PRO0461Q9UI25 63 aa8.59□□□□□ -1.03
RFFL-201ENST00000315249 USP34Q70CQ2 3546 aa8.58□□□□□ -1.04
RFFL-201ENST00000315249 IGLV7-46A0A075B6I9 117 aa8.57□□□□□ -1.04
RFFL-201ENST00000315249 CFAP47Q6ZTR5 3102 aa8.56□□□□□ -1.04
RFFL-201ENST00000315249 M0R2T5 61 aa8.55□□□□□ -1.04
RFFL-201ENST00000315249 COL12A1Q99715 3063 aa8.55□□□□□ -1.04
RFFL-201ENST00000315249 TNRC18O15417 2968 aaPredicted RBP8.55□□□□□ -1.04
RFFL-201ENST00000315249 Q6ZSA8 131 aa8.54□□□□□ -1.04
RFFL-201ENST00000315249 UBR5O95071 2799 aaPredicted RBP8.54□□□□□ -1.04
RFFL-201ENST00000315249 KALRNO60229 2985 aa8.53□□□□□ -1.04
RFFL-201ENST00000315249 ATMQ13315 3056 aa8.51□□□□□ -1.05
RFFL-201ENST00000315249 LRBAP50851 2863 aa8.51□□□□□ -1.05
RFFL-201ENST00000315249 TACC2O95359 2948 aa8.5□□□□□ -1.05
RFFL-201ENST00000315249 LINC01554Q52M75 96 aa8.5□□□□□ -1.05
RFFL-201ENST00000315249 C1orf195Q5TG92 126 aa8.5□□□□□ -1.05
RFFL-201ENST00000315249 LCE6AA0A183 80 aa8.49□□□□□ -1.05
RFFL-201ENST00000315249 NBEAL2Q6ZNJ1 2754 aa8.49□□□□□ -1.05
RFFL-201ENST00000315249 Q5VSD8 79 aa8.47□□□□□ -1.05
RFFL-201ENST00000315249 LINC01600Q96MT4 127 aa8.46□□□□□ -1.06
RFFL-201ENST00000315249 Q8N1X5 172 aa8.46□□□□□ -1.06
RFFL-201ENST00000315249 ADGRG4Q8IZF6 3080 aa8.45□□□□□ -1.06
RFFL-201ENST00000315249 A0A1W2PNM2 257 aa8.43□□□□□ -1.06
RFFL-201ENST00000315249 COA5Q86WW8 74 aa8.43□□□□□ -1.06
RFFL-201ENST00000315249 KMT2BQ9UMN6 2715 aaPredicted RBP8.43□□□□□ -1.06
RFFL-201ENST00000315249 PLAC8Q9NZF1 115 aa8.42□□□□□ -1.06
RFFL-201ENST00000315249 UTP20O75691 2785 aaKnown RBP8.42□□□□□ -1.06
RFFL-201ENST00000315249 IGLV5-48A0A075B6I7 105 aa8.41□□□□□ -1.06
RFFL-201ENST00000315249 KRTAP1-5Q9BYS1 174 aa8.41□□□□□ -1.06
RFFL-201ENST00000315249 DMXL1Q9Y485 3027 aa8.4□□□□□ -1.06
RFFL-201ENST00000315249 ITPR1Q14643 2758 aa8.4□□□□□ -1.07
RFFL-201ENST00000315249 DMBT1Q9UGM3 2413 aaPredicted RBP8.39□□□□□ -1.07
RFFL-201ENST00000315249 KRTAP10-2P60368 255 aa8.39□□□□□ -1.07
RFFL-201ENST00000315249 FLNCQ14315 2725 aa8.38□□□□□ -1.07
RFFL-201ENST00000315249 KRTAP10-1P60331 282 aa8.37□□□□□ -1.07
RFFL-201ENST00000315249 STAB2Q8WWQ8 2551 aa8.36□□□□□ -1.07
RFFL-201ENST00000315249 CD164Q04900 197 aa8.35□□□□□ -1.07
RFFL-201ENST00000315249 FAM229BQ4G0N7 80 aa8.35□□□□□ -1.07
RFFL-201ENST00000315249 NBEAQ8NFP9 2946 aa8.35□□□□□ -1.07
RFFL-201ENST00000315249 A0A0D9SG42 100 aa8.34□□□□□ -1.07
RFFL-201ENST00000315249 ZZEF1O43149 2961 aa8.31□□□□□ -1.08
RFFL-201ENST00000315249 SPINT4Q6UDR6 99 aa8.3□□□□□ -1.08
RFFL-201ENST00000315249 UQCR11O14957 56 aa8.3□□□□□ -1.08
RFFL-201ENST00000315249 NSD1Q96L73 2696 aaPredicted RBP8.3□□□□□ -1.08
RFFL-201ENST00000315249 MYO15AQ9UKN7 3530 aa8.29□□□□□ -1.08
RFFL-201ENST00000315249 FAM104AQ969W3 186 aa8.28□□□□□ -1.08
RFFL-201ENST00000315249 C4orf26Q17RF5 130 aa8.28□□□□□ -1.08
RFFL-201ENST00000315249 ASH1LQ9NR48 2969 aaKnown RBP8.25□□□□□ -1.09
RFFL-201ENST00000315249 HIVEP1P15822 2718 aa8.25□□□□□ -1.09
RFFL-201ENST00000315249 A8MUN3 132 aa8.24□□□□□ -1.09
RFFL-201ENST00000315249 LOC400499M0QZD8 3231 aa8.24□□□□□ -1.09
RFFL-201ENST00000315249 MIR22HGQ0VDD5 57 aa8.23□□□□□ -1.09
RFFL-201ENST00000315249 Q8NDZ9 215 aa8.22□□□□□ -1.09
RFFL-201ENST00000315249 SEC61BP60468 96 aaKnown RBP8.22□□□□□ -1.09
RFFL-201ENST00000315249 CRIPTQ9P021 101 aa8.21□□□□□ -1.1
RFFL-201ENST00000315249 APCP25054 2843 aa8.19□□□□□ -1.1
RFFL-201ENST00000315249 CELSR2Q9HCU4 2923 aa8.16□□□□□ -1.1
RFFL-201ENST00000315249 ZCCHC13Q8WW36 166 aaKnown RBP8.16□□□□□ -1.1
RFFL-201ENST00000315249 CAMK2N1Q7Z7J9 78 aa8.15□□□□□ -1.1
RFFL-201ENST00000315249 SPRR1AP35321 89 aa8.15□□□□□ -1.1
RFFL-201ENST00000315249 KRTAP26-1Q6PEX3 210 aa8.15□□□□□ -1.11
RFFL-201ENST00000315249 RPS28P62857 69 aaKnown RBP8.15□□□□□ -1.11
RFFL-201ENST00000315249 KLKP1Q107X0 134 aa8.14□□□□□ -1.11
RFFL-201ENST00000315249 Q6ZR54 194 aa8.13□□□□□ -1.11
RFFL-201ENST00000315249 PANO1I0J062 215 aa8.13□□□□□ -1.11
RFFL-201ENST00000315249 S4R3F8 94 aa8.12□□□□□ -1.11
RFFL-201ENST00000315249 TENM4Q6N022 2769 aa8.12□□□□□ -1.11
RFFL-201ENST00000315249 CYP4F30PQ9H0H9 118 aa8.11□□□□□ -1.11
RFFL-201ENST00000315249 CSAG1Q6PB30 78 aa8.1□□□□□ -1.11
RFFL-201ENST00000315249 WDFY3Q8IZQ1 3526 aa8.1□□□□□ -1.11
RFFL-201ENST00000315249 HRES1P13985 223 aa8.1□□□□□ -1.11
RFFL-201ENST00000315249 PRO0628Q9UI54 55 aa8.1□□□□□ -1.11
RFFL-201ENST00000315249 SPINK7P58062 85 aa8.09□□□□□ -1.11
RFFL-201ENST00000315249 H7BZZ5 65 aa8.08□□□□□ -1.12
RFFL-201ENST00000315249 OXTP01178 125 aa8.08□□□□□ -1.12
RFFL-201ENST00000315249 KRTAP21-3Q3LHN1 58 aa8.07□□□□□ -1.12
RFFL-201ENST00000315249 SPANXA2-OT1Q8N9U9 137 aa8.06□□□□□ -1.12
RFFL-201ENST00000315249 MMP24-AS1A0A0U1RRL7 71 aa8.04□□□□□ -1.12
RFFL-201ENST00000315249 Q8N9P0 234 aaPredicted RBP8.04□□□□□ -1.12
RFFL-201ENST00000315249 OCR1Q9BZK8 76 aa8.03□□□□□ -1.12
RFFL-201ENST00000315249 CDC42SE1Q9NRR8 79 aa8.03□□□□□ -1.12
RFFL-201ENST00000315249 SPRR1BP22528 89 aa8.02□□□□□ -1.13
RFFL-201ENST00000315249 DCHS2Q6V1P9 2916 aa8.02□□□□□ -1.13
RFFL-201ENST00000315249 ASPMQ8IZT6 3477 aa8.02□□□□□ -1.13
RFFL-201ENST00000315249 A0A087X002 238 aa8.01□□□□□ -1.13
RFFL-201ENST00000315249 ZANQ9Y493 2812 aa8□□□□□ -1.13
RFFL-201ENST00000315249 Q5W150 140 aa7.99□□□□□ -1.13
RFFL-201ENST00000315249 LINC00472Q9H8W2 130 aa7.99□□□□□ -1.13
RFFL-201ENST00000315249 A0A1B0GU33 70 aa7.98□□□□□ -1.13
RFFL-201ENST00000315249 NBPF19A0A087WUL8 3843 aa7.97□□□□□ -1.13
RFFL-201ENST00000315249 NIPBLQ6KC79 2804 aaeCLIP7.97□□□□□ -1.13
RFFL-201ENST00000315249 FP248Q71RG6 208 aaPredicted RBP7.97□□□□□ -1.13
RFFL-201ENST00000315249 R4GN34 69 aa7.97□□□□□ -1.13
RFFL-201ENST00000315249 LINC00483Q53H64 154 aa7.95□□□□□ -1.14
RFFL-201ENST00000315249 RELNP78509 3460 aa7.94□□□□□ -1.14
RFFL-201ENST00000315249 Q6ZRN7 208 aaPredicted RBP7.91□□□□□ -1.14
RFFL-201ENST00000315249 LAMA5O15230 3695 aa7.9□□□□□ -1.14
RFFL-201ENST00000315249 NF1P21359 2839 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms