RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 WFDC13Q8IUB5 93 aa8.7□□□□□ -1.02
MKS1-201ENST00000313863 CMYA5Q8N3K9 4069 aa8.7□□□□□ -1.02
MKS1-201ENST00000313863 KRTAP24-1Q3LI83 254 aa8.69□□□□□ -1.02
MKS1-201ENST00000313863 IGKV2-24A0A0C4DH68 120 aa8.69□□□□□ -1.02
MKS1-201ENST00000313863 SPRR1BP22528 89 aa8.69□□□□□ -1.02
MKS1-201ENST00000313863 FLNBO75369 2602 aaKnown RBP8.68□□□□□ -1.02
MKS1-201ENST00000313863 TRAV22A0A0B4J277 110 aa8.68□□□□□ -1.02
MKS1-201ENST00000313863 A0A1W2PNN7 141 aa8.67□□□□□ -1.02
MKS1-201ENST00000313863 DEFB116Q30KQ4 102 aa8.67□□□□□ -1.02
MKS1-201ENST00000313863 KRTAP29-1A8MX34 341 aaPredicted RBP8.66□□□□□ -1.02
MKS1-201ENST00000313863 CASC2Q6XLA1 102 aa8.66□□□□□ -1.02
MKS1-201ENST00000313863 SPANXA2-OT1Q8N9U9 137 aa8.66□□□□□ -1.02
MKS1-201ENST00000313863 A0A0G2JQZ4 141 aa8.66□□□□□ -1.02
MKS1-201ENST00000313863 BAHCC1Q9P281 2608 aa8.66□□□□□ -1.02
MKS1-201ENST00000313863 A8MWP4 228 aa8.65□□□□□ -1.03
MKS1-201ENST00000313863 LINC00208Q96KT6 92 aa8.65□□□□□ -1.03
MKS1-201ENST00000313863 MAST4O15021 2626 aa8.64□□□□□ -1.03
MKS1-201ENST00000313863 H0Y9P7 68 aa8.63□□□□□ -1.03
MKS1-201ENST00000313863 SEC61GP60059 68 aa8.63□□□□□ -1.03
MKS1-201ENST00000313863 B9D2Q9BPU9 175 aa8.63□□□□□ -1.03
MKS1-201ENST00000313863 F8P00451 2351 aa8.62□□□□□ -1.03
MKS1-201ENST00000313863 LRCOL1A6NCL2 159 aa8.62□□□□□ -1.03
MKS1-201ENST00000313863 RPL37AP61513 92 aaKnown RBP8.62□□□□□ -1.03
MKS1-201ENST00000313863 STAB1Q9NY15 2570 aa8.62□□□□□ -1.03
MKS1-201ENST00000313863 PRR4Q16378 134 aa8.61□□□□□ -1.03
MKS1-201ENST00000313863 LINC00472Q9H8W2 130 aa8.61□□□□□ -1.03
MKS1-201ENST00000313863 UBE2DNLQ8IWF7 75 aa8.6□□□□□ -1.03
MKS1-201ENST00000313863 PHF5AQ7RTV0 110 aaKnown RBP8.59□□□□□ -1.03
MKS1-201ENST00000313863 KRTAP1-5Q9BYS1 174 aa8.58□□□□□ -1.04
MKS1-201ENST00000313863 K7EIL1 84 aa8.57□□□□□ -1.04
MKS1-201ENST00000313863 PMAIP1Q13794 54 aa8.57□□□□□ -1.04
MKS1-201ENST00000313863 NOTCH1P46531 2555 aa8.56□□□□□ -1.04
MKS1-201ENST00000313863 PRB2P02812 416 aaPredicted RBP8.55□□□□□ -1.04
MKS1-201ENST00000313863 HUWE1Q7Z6Z7 4374 aaKnown RBP8.55□□□□□ -1.04
MKS1-201ENST00000313863 PSPHP1O15172 72 aa8.55□□□□□ -1.04
MKS1-201ENST00000313863 C9orf163Q8N9P6 203 aa8.55□□□□□ -1.04
MKS1-201ENST00000313863 CHTF8P0CG12 524 aa8.53□□□□□ -1.04
MKS1-201ENST00000313863 LIMD2Q9BT23 127 aa8.53□□□□□ -1.04
MKS1-201ENST00000313863 KRTAP11-1Q8IUC1 163 aa8.53□□□□□ -1.04
MKS1-201ENST00000313863 MMP24-AS1A0A0U1RRL7 71 aa8.52□□□□□ -1.05
MKS1-201ENST00000313863 TP53AIP1Q9HCN2 124 aa8.52□□□□□ -1.05
MKS1-201ENST00000313863 NBEAL1Q6ZS30 2694 aa8.52□□□□□ -1.05
MKS1-201ENST00000313863 FBN1P35555 2871 aaKnown RBP8.52□□□□□ -1.05
MKS1-201ENST00000313863 MOBPQ13875 183 aa8.5□□□□□ -1.05
MKS1-201ENST00000313863 APLNQ9ULZ1 77 aa8.5□□□□□ -1.05
MKS1-201ENST00000313863 KRTAP13-1Q8IUC0 172 aa8.49□□□□□ -1.05
MKS1-201ENST00000313863 A8MUN3 132 aa8.49□□□□□ -1.05
MKS1-201ENST00000313863 IGLV7-46A0A075B6I9 117 aa8.47□□□□□ -1.05
MKS1-201ENST00000313863 Q5VV11 94 aa8.47□□□□□ -1.05
MKS1-201ENST00000313863 Q8N9P0 234 aaPredicted RBP8.47□□□□□ -1.05
MKS1-201ENST00000313863 ZNF706Q9Y5V0 76 aaPredicted RBP8.45□□□□□ -1.06
MKS1-201ENST00000313863 ASB16-AS1Q495Z4 193 aa8.45□□□□□ -1.06
MKS1-201ENST00000313863 DNAH10Q8IVF4 4471 aa8.44□□□□□ -1.06
MKS1-201ENST00000313863 COL6A5A8TX70 2615 aa8.43□□□□□ -1.06
MKS1-201ENST00000313863 NBDYA0A0U1RRE5 68 aa8.43□□□□□ -1.06
MKS1-201ENST00000313863 LINC00483Q53H64 154 aa8.42□□□□□ -1.06
MKS1-201ENST00000313863 COA5Q86WW8 74 aa8.42□□□□□ -1.06
MKS1-201ENST00000313863 C8orf17Q9NRJ1 99 aa8.42□□□□□ -1.06
MKS1-201ENST00000313863 IGLV9-49A0A0B4J1Y8 123 aa8.42□□□□□ -1.06
MKS1-201ENST00000313863 CDK2AP2O75956 126 aa8.42□□□□□ -1.06
MKS1-201ENST00000313863 Q96NJ1 140 aa8.42□□□□□ -1.06
MKS1-201ENST00000313863 Q6ZR54 194 aa8.41□□□□□ -1.06
MKS1-201ENST00000313863 CHKB-CPT1BH3BT56 60 aa8.41□□□□□ -1.06
MKS1-201ENST00000313863 CD164Q04900 197 aa8.41□□□□□ -1.06
MKS1-201ENST00000313863 PRR15LQ9BU68 103 aa8.41□□□□□ -1.06
MKS1-201ENST00000313863 SRRM2Q9UQ35 2752 aaKnown RBP8.4□□□□□ -1.06
MKS1-201ENST00000313863 SPACA4Q8TDM5 124 aa8.4□□□□□ -1.06
MKS1-201ENST00000313863 DNAH9Q9NYC9 4486 aa8.4□□□□□ -1.07
MKS1-201ENST00000313863 A0A1B0GVX0 72 aa8.39□□□□□ -1.07
MKS1-201ENST00000313863 DYNC2H1Q8NCM8 4307 aaKnown RBP8.39□□□□□ -1.07
MKS1-201ENST00000313863 STAB2Q8WWQ8 2551 aa8.39□□□□□ -1.07
MKS1-201ENST00000313863 Q75L30 129 aa8.38□□□□□ -1.07
MKS1-201ENST00000313863 LOC101927531A0A1B0GV80 90 aa8.38□□□□□ -1.07
MKS1-201ENST00000313863 Q6ZRN7 208 aaPredicted RBP8.37□□□□□ -1.07
MKS1-201ENST00000313863 NUPR2A6NF83 97 aa8.36□□□□□ -1.07
MKS1-201ENST00000313863 PANO1I0J062 215 aa8.36□□□□□ -1.07
MKS1-201ENST00000313863 PCOTHQ58A44 107 aa8.36□□□□□ -1.07
MKS1-201ENST00000313863 NDUFS5O43920 106 aa8.36□□□□□ -1.07
MKS1-201ENST00000313863 TENM2Q9NT68 2774 aa8.36□□□□□ -1.07
MKS1-201ENST00000313863 IGHV6-1A0A0B4J1U7 121 aa8.35□□□□□ -1.07
MKS1-201ENST00000313863 MRPL34Q9BQ48 92 aaKnown RBP8.34□□□□□ -1.07
MKS1-201ENST00000313863 KTN1-AS1Q86SY8 53 aa8.33□□□□□ -1.08
MKS1-201ENST00000313863 MDFIQ99750 246 aa8.33□□□□□ -1.08
MKS1-201ENST00000313863 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.33□□□□□ -1.08
MKS1-201ENST00000313863 ATP11AUNQ6ZP68 121 aa8.33□□□□□ -1.08
MKS1-201ENST00000313863 WWC2-AS2Q96NR7 200 aa8.33□□□□□ -1.08
MKS1-201ENST00000313863 MGAM2Q2M2H8 2515 aa8.32□□□□□ -1.08
MKS1-201ENST00000313863 LYSTQ99698 3801 aa8.32□□□□□ -1.08
MKS1-201ENST00000313863 A8MU10 97 aa8.31□□□□□ -1.08
MKS1-201ENST00000313863 A6NED7 52 aa8.31□□□□□ -1.08
MKS1-201ENST00000313863 LINC01558Q9Y6Z2 57 aa8.31□□□□□ -1.08
MKS1-201ENST00000313863 IGLV5-52A0A0A0MRZ9 124 aa8.3□□□□□ -1.08
MKS1-201ENST00000313863 COL7A1Q02388 2944 aa8.29□□□□□ -1.08
MKS1-201ENST00000313863 PLAC8Q9NZF1 115 aa8.29□□□□□ -1.08
MKS1-201ENST00000313863 ZNF861PO60384 105 aa8.28□□□□□ -1.08
MKS1-201ENST00000313863 PSORS1C2Q9UIG4 136 aa8.28□□□□□ -1.08
MKS1-201ENST00000313863 A0A087WTM6 91 aa8.27□□□□□ -1.09
MKS1-201ENST00000313863 LCA10Q71F78 164 aa8.27□□□□□ -1.09
MKS1-201ENST00000313863 CDC42SE1Q9NRR8 79 aa8.26□□□□□ -1.09
MKS1-201ENST00000313863 A6NN06 94 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms