RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 TNP2Q05952 138 aa5.23□□□□□ -1.57
VPS41-202ENST00000310301 TLX1NBP0CAT3 122 aa5.22□□□□□ -1.57
VPS41-202ENST00000310301 SMR3BP02814 79 aaPredicted RBP5.22□□□□□ -1.57
VPS41-202ENST00000310301 IGLV7-46A0A075B6I9 117 aa5.22□□□□□ -1.57
VPS41-202ENST00000310301 LINC00304Q8N9R0 145 aa5.21□□□□□ -1.58
VPS41-202ENST00000310301 Q8N9P0 234 aaPredicted RBP5.2□□□□□ -1.58
VPS41-202ENST00000310301 LINC01558Q9Y6Z2 57 aa5.19□□□□□ -1.58
VPS41-202ENST00000310301 IGLV5-37A0A075B6J1 123 aa5.19□□□□□ -1.58
VPS41-202ENST00000310301 CNBPP62633 177 aaKnown RBP5.19□□□□□ -1.58
VPS41-202ENST00000310301 PRUNE2Q8WUY3 3088 aa5.18□□□□□ -1.58
VPS41-202ENST00000310301 CSAG1Q6PB30 78 aa5.18□□□□□ -1.58
VPS41-202ENST00000310301 Q5VV11 94 aa5.18□□□□□ -1.58
VPS41-202ENST00000310301 SPRR4Q96PI1 79 aa5.18□□□□□ -1.58
VPS41-202ENST00000310301 A0A1B0GU33 70 aa5.18□□□□□ -1.58
VPS41-202ENST00000310301 COX6B2Q6YFQ2 88 aa5.17□□□□□ -1.58
VPS41-202ENST00000310301 FLNCQ14315 2725 aa5.17□□□□□ -1.58
VPS41-202ENST00000310301 HIVEP1P15822 2718 aa5.17□□□□□ -1.58
VPS41-202ENST00000310301 KMT2BQ9UMN6 2715 aaPredicted RBP5.16□□□□□ -1.58
VPS41-202ENST00000310301 NBEAL1Q6ZS30 2694 aa5.16□□□□□ -1.58
VPS41-202ENST00000310301 HRES1P13985 223 aa5.16□□□□□ -1.58
VPS41-202ENST00000310301 ITPR2Q14571 2701 aa5.15□□□□□ -1.59
VPS41-202ENST00000310301 IGLV7-43P04211 117 aa5.15□□□□□ -1.59
VPS41-202ENST00000310301 PSORS1C2Q9UIG4 136 aa5.14□□□□□ -1.59
VPS41-202ENST00000310301 SPINK7P58062 85 aa5.14□□□□□ -1.59
VPS41-202ENST00000310301 OXTP01178 125 aa5.14□□□□□ -1.59
VPS41-202ENST00000310301 A0A0A0MQY5 61 aa5.12□□□□□ -1.59
VPS41-202ENST00000310301 UBR5O95071 2799 aaPredicted RBP5.12□□□□□ -1.59
VPS41-202ENST00000310301 BRCA2P51587 3418 aa5.12□□□□□ -1.59
VPS41-202ENST00000310301 NOTCH1P46531 2555 aa5.11□□□□□ -1.59
VPS41-202ENST00000310301 DMAC1Q96GE9 116 aa5.1□□□□□ -1.59
VPS41-202ENST00000310301 LINC00483Q53H64 154 aa5.1□□□□□ -1.59
VPS41-202ENST00000310301 WDFY4Q6ZS81 3184 aa5.09□□□□□ -1.59
VPS41-202ENST00000310301 MMP24-AS1A0A0U1RRL7 71 aa5.08□□□□□ -1.6
VPS41-202ENST00000310301 Q5VSD8 79 aa5.08□□□□□ -1.6
VPS41-202ENST00000310301 NSD1Q96L73 2696 aaPredicted RBP5.07□□□□□ -1.6
VPS41-202ENST00000310301 CAMK2N1Q7Z7J9 78 aa5.06□□□□□ -1.6
VPS41-202ENST00000310301 Q6ZR54 194 aa5.06□□□□□ -1.6
VPS41-202ENST00000310301 TENM4Q6N022 2769 aa5.05□□□□□ -1.6
VPS41-202ENST00000310301 CFAP54Q96N23 3096 aa5.04□□□□□ -1.6
VPS41-202ENST00000310301 TRIOO75962 3097 aa5.04□□□□□ -1.6
VPS41-202ENST00000310301 ITPR1Q14643 2758 aa5.03□□□□□ -1.6
VPS41-202ENST00000310301 PLAC8Q9NZF1 115 aa5.03□□□□□ -1.6
VPS41-202ENST00000310301 COL6A3P12111 3177 aa5.03□□□□□ -1.61
VPS41-202ENST00000310301 APCP25054 2843 aa5.02□□□□□ -1.61
VPS41-202ENST00000310301 Q8NDZ9 215 aa5.02□□□□□ -1.61
VPS41-202ENST00000310301 SZT2Q5T011 3432 aa5.02□□□□□ -1.61
VPS41-202ENST00000310301 Q5W150 140 aa5.01□□□□□ -1.61
VPS41-202ENST00000310301 ASH1LQ9NR48 2969 aaKnown RBP5□□□□□ -1.61
VPS41-202ENST00000310301 ROMO1P60602 79 aa4.99□□□□□ -1.61
VPS41-202ENST00000310301 ZCCHC13Q8WW36 166 aaKnown RBP4.99□□□□□ -1.61
VPS41-202ENST00000310301 MAP1AP78559 2803 aaPredicted RBP4.99□□□□□ -1.61
VPS41-202ENST00000310301 LAMA2P24043 3122 aaKnown RBP4.99□□□□□ -1.61
VPS41-202ENST00000310301 FRYLO94915 3013 aa4.98□□□□□ -1.61
VPS41-202ENST00000310301 LINC00472Q9H8W2 130 aa4.98□□□□□ -1.61
VPS41-202ENST00000310301 KRTAP10-1P60331 282 aa4.97□□□□□ -1.61
VPS41-202ENST00000310301 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.97□□□□□ -1.61
VPS41-202ENST00000310301 S4R3F8 94 aa4.97□□□□□ -1.61
VPS41-202ENST00000310301 Q6ZSA8 131 aa4.96□□□□□ -1.61
VPS41-202ENST00000310301 EYSQ5T1H1 3165 aa4.96□□□□□ -1.62
VPS41-202ENST00000310301 KRTAP10-2P60368 255 aa4.95□□□□□ -1.62
VPS41-202ENST00000310301 SPRR1AP35321 89 aa4.95□□□□□ -1.62
VPS41-202ENST00000310301 ASB16-AS1Q495Z4 193 aa4.95□□□□□ -1.62
VPS41-202ENST00000310301 KRTAP1-5Q9BYS1 174 aa4.95□□□□□ -1.62
VPS41-202ENST00000310301 UTP20O75691 2785 aaKnown RBP4.95□□□□□ -1.62
VPS41-202ENST00000310301 KRTAP16-1A8MUX0 517 aa4.95□□□□□ -1.62
VPS41-202ENST00000310301 RPL37P61927 97 aaKnown RBP4.95□□□□□ -1.62
VPS41-202ENST00000310301 DMXL2Q8TDJ6 3036 aa4.94□□□□□ -1.62
VPS41-202ENST00000310301 CDH23Q9H251 3354 aa4.93□□□□□ -1.62
VPS41-202ENST00000310301 H1FX-AS1Q4G0G2 97 aa4.93□□□□□ -1.62
VPS41-202ENST00000310301 STAB2Q8WWQ8 2551 aa4.92□□□□□ -1.62
VPS41-202ENST00000310301 FRYQ5TBA9 3013 aa4.92□□□□□ -1.62
VPS41-202ENST00000310301 COL12A1Q99715 3063 aa4.91□□□□□ -1.62
VPS41-202ENST00000310301 KRTAP26-1Q6PEX3 210 aa4.91□□□□□ -1.62
VPS41-202ENST00000310301 UNC80Q8N2C7 3258 aa4.9□□□□□ -1.63
VPS41-202ENST00000310301 SEC61BP60468 96 aaKnown RBP4.9□□□□□ -1.63
VPS41-202ENST00000310301 A6NN06 94 aa4.9□□□□□ -1.63
VPS41-202ENST00000310301 SPRR1BP22528 89 aa4.9□□□□□ -1.63
VPS41-202ENST00000310301 ATMQ13315 3056 aa4.89□□□□□ -1.63
VPS41-202ENST00000310301 R4GN34 69 aa4.89□□□□□ -1.63
VPS41-202ENST00000310301 SPATA8Q6RVD6 105 aa4.88□□□□□ -1.63
VPS41-202ENST00000310301 KALRNO60229 2985 aa4.88□□□□□ -1.63
VPS41-202ENST00000310301 NBEAQ8NFP9 2946 aa4.87□□□□□ -1.63
VPS41-202ENST00000310301 XIRP2A4UGR9 3374 aa4.86□□□□□ -1.63
VPS41-202ENST00000310301 KRTAP25-1Q3LHN0 102 aa4.85□□□□□ -1.63
VPS41-202ENST00000310301 REV3LO60673 3130 aa4.85□□□□□ -1.63
VPS41-202ENST00000310301 DMXL1Q9Y485 3027 aa4.85□□□□□ -1.63
VPS41-202ENST00000310301 Q6ZRN7 208 aaPredicted RBP4.84□□□□□ -1.64
VPS41-202ENST00000310301 KRTAP29-1A8MX34 341 aaPredicted RBP4.83□□□□□ -1.64
VPS41-202ENST00000310301 M0R2T5 61 aa4.82□□□□□ -1.64
VPS41-202ENST00000310301 ADM2Q7Z4H4 148 aa4.82□□□□□ -1.64
VPS41-202ENST00000310301 VPS13AQ96RL7 3174 aa4.81□□□□□ -1.64
VPS41-202ENST00000310301 M0QZ58 72 aa4.81□□□□□ -1.64
VPS41-202ENST00000310301 TACC2O95359 2948 aa4.81□□□□□ -1.64
VPS41-202ENST00000310301 NDUFAF8A1L188 74 aa4.79□□□□□ -1.64
VPS41-202ENST00000310301 NIPBLQ6KC79 2804 aaeCLIP4.79□□□□□ -1.64
VPS41-202ENST00000310301 A8MU10 97 aa4.78□□□□□ -1.64
VPS41-202ENST00000310301 KRTAP4-16G5E9R7 235 aaPredicted RBP4.75□□□□□ -1.65
VPS41-202ENST00000310301 LRBAP50851 2863 aa4.74□□□□□ -1.65
VPS41-202ENST00000310301 PANO1I0J062 215 aa4.74□□□□□ -1.65
VPS41-202ENST00000310301 ZZEF1O43149 2961 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms