RNA–Protein interactions for RNA: ENST00000310015.10

SP3-201, Transcript of Sp3 transcription factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SP3, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-201ENST00000310015 ADM2Q7Z4H4 148 aa7.09□□□□□ -1.27
SP3-201ENST00000310015 C20orf166-AS1Q96NR2 134 aa7.09□□□□□ -1.27
SP3-201ENST00000310015 LINC00472Q9H8W2 130 aa7.06□□□□□ -1.28
SP3-201ENST00000310015 FLG2Q5D862 2391 aaPredicted RBP7.05□□□□□ -1.28
SP3-201ENST00000310015 BPTFQ12830 3046 aa7.03□□□□□ -1.28
SP3-201ENST00000310015 UTRNP46939 3433 aa7.01□□□□□ -1.29
SP3-201ENST00000310015 SPRR1BP22528 89 aa7□□□□□ -1.29
SP3-201ENST00000310015 A8MU10 97 aa6.98□□□□□ -1.29
SP3-201ENST00000310015 KRTAP1-3Q8IUG1 177 aa6.98□□□□□ -1.29
SP3-201ENST00000310015 ASB16-AS1Q495Z4 193 aa6.97□□□□□ -1.29
SP3-201ENST00000310015 KRTAP26-1Q6PEX3 210 aa6.97□□□□□ -1.29
SP3-201ENST00000310015 KRTAP25-1Q3LHN0 102 aa6.95□□□□□ -1.3
SP3-201ENST00000310015 C5orf42Q9H799 3197 aa6.94□□□□□ -1.3
SP3-201ENST00000310015 USP24Q9UPU5 2620 aa6.94□□□□□ -1.3
SP3-201ENST00000310015 KRTAP1-1Q07627 177 aa6.93□□□□□ -1.3
SP3-201ENST00000310015 KRTAP29-1A8MX34 341 aaPredicted RBP6.9□□□□□ -1.3
SP3-201ENST00000310015 Q6ZR54 194 aa6.9□□□□□ -1.3
SP3-201ENST00000310015 PCNTO95613 3336 aa6.9□□□□□ -1.3
SP3-201ENST00000310015 Q5VSD8 79 aa6.9□□□□□ -1.3
SP3-201ENST00000310015 A6NN06 94 aa6.9□□□□□ -1.31
SP3-201ENST00000310015 CEP350Q5VT06 3117 aa6.89□□□□□ -1.31
SP3-201ENST00000310015 C10orf95Q9H7T3 257 aa6.87□□□□□ -1.31
SP3-201ENST00000310015 PLAC8Q9NZF1 115 aa6.87□□□□□ -1.31
SP3-201ENST00000310015 KRTAP4-16G5E9R7 235 aaPredicted RBP6.84□□□□□ -1.31
SP3-201ENST00000310015 MAST4O15021 2626 aa6.83□□□□□ -1.32
SP3-201ENST00000310015 A0A0C4DFX4 3053 aa6.83□□□□□ -1.32
SP3-201ENST00000310015 MGAM2Q2M2H8 2515 aa6.83□□□□□ -1.32
SP3-201ENST00000310015 LCE6AA0A183 80 aa6.82□□□□□ -1.32
SP3-201ENST00000310015 ATRQ13535 2644 aa6.82□□□□□ -1.32
SP3-201ENST00000310015 KRTAP1-5Q9BYS1 174 aa6.79□□□□□ -1.32
SP3-201ENST00000310015 CFAP54Q96N23 3096 aa6.78□□□□□ -1.32
SP3-201ENST00000310015 A0A087X002 238 aa6.77□□□□□ -1.33
SP3-201ENST00000310015 NOTCH2NLQ7Z3S9 236 aa6.77□□□□□ -1.33
SP3-201ENST00000310015 PANO1I0J062 215 aa6.75□□□□□ -1.33
SP3-201ENST00000310015 FLNAP21333 2647 aaKnown RBP6.75□□□□□ -1.33
SP3-201ENST00000310015 HECTD1Q9ULT8 2610 aa6.75□□□□□ -1.33
SP3-201ENST00000310015 KRTAP10-1P60331 282 aa6.73□□□□□ -1.33
SP3-201ENST00000310015 KRTAP10-2P60368 255 aa6.72□□□□□ -1.33
SP3-201ENST00000310015 A8MUU9 505 aa6.71□□□□□ -1.33
SP3-201ENST00000310015 CENPEQ02224 2701 aa6.7□□□□□ -1.34
SP3-201ENST00000310015 CHD7Q9P2D1 2997 aa6.7□□□□□ -1.34
SP3-201ENST00000310015 ITPR3Q14573 2671 aa6.67□□□□□ -1.34
SP3-201ENST00000310015 MKI67P46013 3256 aaKnown RBP6.62□□□□□ -1.35
SP3-201ENST00000310015 AKAP13Q12802 2813 aa6.61□□□□□ -1.35
SP3-201ENST00000310015 CHD6Q8TD26 2715 aa6.61□□□□□ -1.35
SP3-201ENST00000310015 FREM2Q5SZK8 3169 aa6.59□□□□□ -1.35
SP3-201ENST00000310015 GCN1Q92616 2671 aaKnown RBP6.58□□□□□ -1.36
SP3-201ENST00000310015 LAMA2P24043 3122 aaKnown RBP6.58□□□□□ -1.36
SP3-201ENST00000310015 CHD9Q3L8U1 2897 aa6.57□□□□□ -1.36
SP3-201ENST00000310015 UNC79Q9P2D8 2635 aa6.57□□□□□ -1.36
SP3-201ENST00000310015 KRTAP11-1Q8IUC1 163 aa6.57□□□□□ -1.36
SP3-201ENST00000310015 HTTP42858 3142 aa6.56□□□□□ -1.36
SP3-201ENST00000310015 NBEAL1Q6ZS30 2694 aa6.55□□□□□ -1.36
SP3-201ENST00000310015 KRTAP7-1Q8IUC3 87 aa6.55□□□□□ -1.36
SP3-201ENST00000310015 SETXQ7Z333 2677 aaKnown RBP6.54□□□□□ -1.36
SP3-201ENST00000310015 TNP1P09430 55 aa6.54□□□□□ -1.36
SP3-201ENST00000310015 TRIOO75962 3097 aa6.52□□□□□ -1.37
SP3-201ENST00000310015 STAB1Q9NY15 2570 aa6.51□□□□□ -1.37
SP3-201ENST00000310015 HELZ2Q9BYK8 2649 aaKnown RBP6.5□□□□□ -1.37
SP3-201ENST00000310015 XIRP2A4UGR9 3374 aa6.48□□□□□ -1.37
SP3-201ENST00000310015 BRCA2P51587 3418 aa6.48□□□□□ -1.37
SP3-201ENST00000310015 MGAQ8IWI9 3026 aa6.47□□□□□ -1.37
SP3-201ENST00000310015 DMBT1Q9UGM3 2413 aaPredicted RBP6.47□□□□□ -1.37
SP3-201ENST00000310015 NBEAL2Q6ZNJ1 2754 aa6.46□□□□□ -1.38
SP3-201ENST00000310015 LAMA3Q16787 3333 aa6.45□□□□□ -1.38
SP3-201ENST00000310015 CELSR3Q9NYQ7 3312 aa6.45□□□□□ -1.38
SP3-201ENST00000310015 A0A1B0GVY2 172 aa6.44□□□□□ -1.38
SP3-201ENST00000310015 KRTAP13-1Q8IUC0 172 aa6.44□□□□□ -1.38
SP3-201ENST00000310015 CFAP46Q8IYW2 2715 aa6.43□□□□□ -1.38
SP3-201ENST00000310015 NOTCH1P46531 2555 aa6.42□□□□□ -1.38
SP3-201ENST00000310015 KRTAP10-8P60410 259 aa6.42□□□□□ -1.38
SP3-201ENST00000310015 TEP1Q99973 2627 aaKnown RBP6.4□□□□□ -1.38
SP3-201ENST00000310015 TRANK1O15050 2925 aa6.4□□□□□ -1.38
SP3-201ENST00000310015 RANBP2P49792 3224 aaKnown RBP6.4□□□□□ -1.39
SP3-201ENST00000310015 WDFY4Q6ZS81 3184 aa6.39□□□□□ -1.39
SP3-201ENST00000310015 TEX15Q9BXT5 2789 aa6.39□□□□□ -1.39
SP3-201ENST00000310015 RPS29P62273 56 aaKnown RBP6.39□□□□□ -1.39
SP3-201ENST00000310015 UNC80Q8N2C7 3258 aa6.38□□□□□ -1.39
SP3-201ENST00000310015 TNRC18O15417 2968 aaPredicted RBP6.36□□□□□ -1.39
SP3-201ENST00000310015 ZNF292O60281 2723 aa6.36□□□□□ -1.39
SP3-201ENST00000310015 VPS13AQ96RL7 3174 aa6.36□□□□□ -1.39
SP3-201ENST00000310015 FRYQ5TBA9 3013 aa6.35□□□□□ -1.39
SP3-201ENST00000310015 KRTAP13-2Q52LG2 175 aa6.35□□□□□ -1.39
SP3-201ENST00000310015 DNAH14Q0VDD8 3507 aa6.35□□□□□ -1.39
SP3-201ENST00000310015 Q6ZRN7 208 aaPredicted RBP6.35□□□□□ -1.39
SP3-201ENST00000310015 COL6A5A8TX70 2615 aa6.31□□□□□ -1.4
SP3-201ENST00000310015 PRUNE2Q8WUY3 3088 aa6.3□□□□□ -1.4
SP3-201ENST00000310015 MAP1AP78559 2803 aaPredicted RBP6.29□□□□□ -1.4
SP3-201ENST00000310015 BAHCC1Q9P281 2608 aa6.28□□□□□ -1.4
SP3-201ENST00000310015 CDH23Q9H251 3354 aa6.28□□□□□ -1.4
SP3-201ENST00000310015 STAB2Q8WWQ8 2551 aa6.28□□□□□ -1.4
SP3-201ENST00000310015 H0YAA0 97 aa6.28□□□□□ -1.4
SP3-201ENST00000310015 P0C880 135 aa6.27□□□□□ -1.41
SP3-201ENST00000310015 KALRNO60229 2985 aa6.26□□□□□ -1.41
SP3-201ENST00000310015 ITPR1Q14643 2758 aa6.24□□□□□ -1.41
SP3-201ENST00000310015 DSPP15924 2871 aaKnown RBP6.24□□□□□ -1.41
SP3-201ENST00000310015 NBEAQ8NFP9 2946 aa6.22□□□□□ -1.41
SP3-201ENST00000310015 PP632Q6XCG6 107 aa6.2□□□□□ -1.42
SP3-201ENST00000310015 VCANP13611 3396 aa6.19□□□□□ -1.42
SP3-201ENST00000310015 UBR5O95071 2799 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms