RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 UBE2AP49459 152 aa7.13□□□□□ -1.27
PTPN7-201ENST00000309017 TENM3Q9P273 2699 aa7.12□□□□□ -1.27
PTPN7-201ENST00000309017 A0A096LNI7 61 aa7.12□□□□□ -1.27
PTPN7-201ENST00000309017 DNAH10OSP0CZ25 163 aa7.12□□□□□ -1.27
PTPN7-201ENST00000309017 IGFL1Q6UW32 110 aa7.12□□□□□ -1.27
PTPN7-201ENST00000309017 PLA2G2DQ9UNK4 145 aa7.12□□□□□ -1.27
PTPN7-201ENST00000309017 SPRR1AP35321 89 aa7.12□□□□□ -1.27
PTPN7-201ENST00000309017 CMYA5Q8N3K9 4069 aa7.12□□□□□ -1.27
PTPN7-201ENST00000309017 TRAV22A0A0B4J277 110 aa7.11□□□□□ -1.27
PTPN7-201ENST00000309017 TGP01266 2768 aa7.11□□□□□ -1.27
PTPN7-201ENST00000309017 KRTAP10-11P60412 298 aa7.11□□□□□ -1.27
PTPN7-201ENST00000309017 ZCCHC13Q8WW36 166 aaKnown RBP7.1□□□□□ -1.27
PTPN7-201ENST00000309017 LINC00588Q9Y4M8 146 aa7.1□□□□□ -1.27
PTPN7-201ENST00000309017 A8MUN3 132 aa7.1□□□□□ -1.27
PTPN7-201ENST00000309017 LCE6AA0A183 80 aa7.09□□□□□ -1.27
PTPN7-201ENST00000309017 H0Y9P7 68 aa7.09□□□□□ -1.27
PTPN7-201ENST00000309017 Q1T7F1 81 aa7.09□□□□□ -1.27
PTPN7-201ENST00000309017 B9D2Q9BPU9 175 aa7.09□□□□□ -1.27
PTPN7-201ENST00000309017 IGLV5-37A0A075B6J1 123 aa7.09□□□□□ -1.27
PTPN7-201ENST00000309017 CASC2Q6XLA1 102 aa7.09□□□□□ -1.27
PTPN7-201ENST00000309017 H0Y9J4 135 aa7.08□□□□□ -1.28
PTPN7-201ENST00000309017 KRTAP7-1Q8IUC3 87 aa7.08□□□□□ -1.28
PTPN7-201ENST00000309017 SEC61GP60059 68 aa7.06□□□□□ -1.28
PTPN7-201ENST00000309017 CYP4F30PQ9H0H9 118 aa7.06□□□□□ -1.28
PTPN7-201ENST00000309017 CHKB-CPT1BH3BT56 60 aa7.06□□□□□ -1.28
PTPN7-201ENST00000309017 PMAIP1Q13794 54 aa7.05□□□□□ -1.28
PTPN7-201ENST00000309017 PRR15Q8IV56 129 aa7.04□□□□□ -1.28
PTPN7-201ENST00000309017 PRR15LQ9BU68 103 aa7.03□□□□□ -1.28
PTPN7-201ENST00000309017 SPTSSBQ8NFR3 76 aa7.03□□□□□ -1.28
PTPN7-201ENST00000309017 DNAH10Q8IVF4 4471 aa7.01□□□□□ -1.29
PTPN7-201ENST00000309017 UBE2DNLQ8IWF7 75 aa7□□□□□ -1.29
PTPN7-201ENST00000309017 CHTF8P0CG12 524 aa7□□□□□ -1.29
PTPN7-201ENST00000309017 KRTAP24-1Q3LI83 254 aa7□□□□□ -1.29
PTPN7-201ENST00000309017 PCOTHQ58A44 107 aa7□□□□□ -1.29
PTPN7-201ENST00000309017 PHF5AQ7RTV0 110 aaKnown RBP7□□□□□ -1.29
PTPN7-201ENST00000309017 DNAH1Q9P2D7 4330 aa7□□□□□ -1.29
PTPN7-201ENST00000309017 NDUFS5O43920 106 aa6.99□□□□□ -1.29
PTPN7-201ENST00000309017 C16orf90A8MZG2 172 aa6.98□□□□□ -1.29
PTPN7-201ENST00000309017 A8MWP4 228 aa6.98□□□□□ -1.29
PTPN7-201ENST00000309017 A6NED7 52 aa6.97□□□□□ -1.29
PTPN7-201ENST00000309017 CNBPP62633 177 aaKnown RBP6.97□□□□□ -1.29
PTPN7-201ENST00000309017 LIMD2Q9BT23 127 aa6.97□□□□□ -1.29
PTPN7-201ENST00000309017 H3BPC8 53 aa6.96□□□□□ -1.29
PTPN7-201ENST00000309017 A8MU10 97 aa6.96□□□□□ -1.3
PTPN7-201ENST00000309017 DNAH7Q8WXX0 4024 aa6.96□□□□□ -1.3
PTPN7-201ENST00000309017 Q5VV11 94 aa6.96□□□□□ -1.3
PTPN7-201ENST00000309017 KRTAP29-1A8MX34 341 aaPredicted RBP6.95□□□□□ -1.3
PTPN7-201ENST00000309017 IGLV9-49A0A0B4J1Y8 123 aa6.95□□□□□ -1.3
PTPN7-201ENST00000309017 SRRM2Q9UQ35 2752 aaKnown RBP6.95□□□□□ -1.3
PTPN7-201ENST00000309017 SPANXA2-OT1Q8N9U9 137 aa6.95□□□□□ -1.3
PTPN7-201ENST00000309017 IGLV8-61A0A075B6I0 122 aa6.94□□□□□ -1.3
PTPN7-201ENST00000309017 Q8N9P0 234 aaPredicted RBP6.94□□□□□ -1.3
PTPN7-201ENST00000309017 COA5Q86WW8 74 aa6.93□□□□□ -1.3
PTPN7-201ENST00000309017 CDK2AP2O75956 126 aa6.92□□□□□ -1.3
PTPN7-201ENST00000309017 DNAH9Q9NYC9 4486 aa6.92□□□□□ -1.3
PTPN7-201ENST00000309017 MDFIQ99750 246 aa6.91□□□□□ -1.3
PTPN7-201ENST00000309017 LINC00472Q9H8W2 130 aa6.91□□□□□ -1.3
PTPN7-201ENST00000309017 KRTAP11-1Q8IUC1 163 aa6.9□□□□□ -1.3
PTPN7-201ENST00000309017 SPAG11AQ6PDA7 123 aa6.9□□□□□ -1.31
PTPN7-201ENST00000309017 IGHV6-1A0A0B4J1U7 121 aa6.89□□□□□ -1.31
PTPN7-201ENST00000309017 C14orf177Q52M58 125 aa6.89□□□□□ -1.31
PTPN7-201ENST00000309017 KRTAP1-5Q9BYS1 174 aa6.89□□□□□ -1.31
PTPN7-201ENST00000309017 TENM2Q9NT68 2774 aa6.89□□□□□ -1.31
PTPN7-201ENST00000309017 MMP24-AS1A0A0U1RRL7 71 aa6.88□□□□□ -1.31
PTPN7-201ENST00000309017 C9orf163Q8N9P6 203 aa6.87□□□□□ -1.31
PTPN7-201ENST00000309017 IGLV7-46A0A075B6I9 117 aa6.85□□□□□ -1.31
PTPN7-201ENST00000309017 DNAH3Q8TD57 4116 aa6.85□□□□□ -1.31
PTPN7-201ENST00000309017 SPRR1BP22528 89 aa6.85□□□□□ -1.31
PTPN7-201ENST00000309017 TP53AIP1Q9HCN2 124 aa6.84□□□□□ -1.31
PTPN7-201ENST00000309017 CD164Q04900 197 aa6.83□□□□□ -1.32
PTPN7-201ENST00000309017 LOC101927531A0A1B0GV80 90 aa6.83□□□□□ -1.32
PTPN7-201ENST00000309017 C8orf17Q9NRJ1 99 aa6.83□□□□□ -1.32
PTPN7-201ENST00000309017 MOBPQ13875 183 aa6.82□□□□□ -1.32
PTPN7-201ENST00000309017 SPINK6Q6UWN8 80 aa6.82□□□□□ -1.32
PTPN7-201ENST00000309017 Q75L30 129 aa6.82□□□□□ -1.32
PTPN7-201ENST00000309017 COL7A1Q02388 2944 aa6.81□□□□□ -1.32
PTPN7-201ENST00000309017 ATP11AUNQ6ZP68 121 aa6.81□□□□□ -1.32
PTPN7-201ENST00000309017 LCA10Q71F78 164 aa6.81□□□□□ -1.32
PTPN7-201ENST00000309017 K7EIL1 84 aa6.81□□□□□ -1.32
PTPN7-201ENST00000309017 KTN1-AS1Q86SY8 53 aa6.8□□□□□ -1.32
PTPN7-201ENST00000309017 ANAPC11Q9NYG5 84 aa6.78□□□□□ -1.32
PTPN7-201ENST00000309017 DMBT1Q9UGM3 2413 aaPredicted RBP6.78□□□□□ -1.32
PTPN7-201ENST00000309017 PANO1I0J062 215 aa6.78□□□□□ -1.32
PTPN7-201ENST00000309017 A0A1B0GVX0 72 aa6.77□□□□□ -1.33
PTPN7-201ENST00000309017 MRPL34Q9BQ48 92 aaKnown RBP6.77□□□□□ -1.33
PTPN7-201ENST00000309017 CDC42SE1Q9NRR8 79 aa6.77□□□□□ -1.33
PTPN7-201ENST00000309017 FRAS1Q86XX4 4008 aa6.76□□□□□ -1.33
PTPN7-201ENST00000309017 HRES1P13985 223 aa6.74□□□□□ -1.33
PTPN7-201ENST00000309017 LINC01558Q9Y6Z2 57 aa6.74□□□□□ -1.33
PTPN7-201ENST00000309017 ZNF706Q9Y5V0 76 aaPredicted RBP6.74□□□□□ -1.33
PTPN7-201ENST00000309017 Q96NJ1 140 aa6.73□□□□□ -1.33
PTPN7-201ENST00000309017 PRR26Q8N8Z3 221 aa6.73□□□□□ -1.33
PTPN7-201ENST00000309017 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.73□□□□□ -1.33
PTPN7-201ENST00000309017 SPINK7P58062 85 aa6.72□□□□□ -1.33
PTPN7-201ENST00000309017 RBM12B-AS1Q9P1G2 102 aa6.72□□□□□ -1.33
PTPN7-201ENST00000309017 APLNQ9ULZ1 77 aa6.72□□□□□ -1.33
PTPN7-201ENST00000309017 NBDYA0A0U1RRE5 68 aa6.71□□□□□ -1.33
PTPN7-201ENST00000309017 Q6ZR54 194 aa6.71□□□□□ -1.33
PTPN7-201ENST00000309017 A0A087X002 238 aa6.71□□□□□ -1.34
PTPN7-201ENST00000309017 NOTCH2NLQ7Z3S9 236 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms