RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 PSORS1C2Q9UIG4 136 aa7.27□□□□□ -1.25
PCDHGC3-201ENST00000308177 H3BPC8 53 aa7.27□□□□□ -1.25
PCDHGC3-201ENST00000308177 C1orf195Q5TG92 126 aa7.25□□□□□ -1.25
PCDHGC3-201ENST00000308177 IGKV2D-30A0A075B6S6 120 aa7.25□□□□□ -1.25
PCDHGC3-201ENST00000308177 IGKV2-30P06310 120 aa7.25□□□□□ -1.25
PCDHGC3-201ENST00000308177 PRR15Q8IV56 129 aa7.25□□□□□ -1.25
PCDHGC3-201ENST00000308177 PLA2G1BP04054 148 aaKnown RBP7.24□□□□□ -1.25
PCDHGC3-201ENST00000308177 LINC00313P59037 77 aa7.24□□□□□ -1.25
PCDHGC3-201ENST00000308177 KRTAP26-1Q6PEX3 210 aa7.24□□□□□ -1.25
PCDHGC3-201ENST00000308177 ANAPC11Q9NYG5 84 aa7.24□□□□□ -1.25
PCDHGC3-201ENST00000308177 PSPHP1O15172 72 aa7.23□□□□□ -1.25
PCDHGC3-201ENST00000308177 PRO0628Q9UI54 55 aa7.23□□□□□ -1.25
PCDHGC3-201ENST00000308177 RELNP78509 3460 aa7.23□□□□□ -1.25
PCDHGC3-201ENST00000308177 SSBP3-AS1Q7Z2R9 100 aa7.23□□□□□ -1.25
PCDHGC3-201ENST00000308177 SPRR4Q96PI1 79 aa7.23□□□□□ -1.25
PCDHGC3-201ENST00000308177 DCHS2Q6V1P9 2916 aa7.23□□□□□ -1.25
PCDHGC3-201ENST00000308177 FBN2P35556 2912 aa7.23□□□□□ -1.25
PCDHGC3-201ENST00000308177 IGLV7-43P04211 117 aa7.22□□□□□ -1.25
PCDHGC3-201ENST00000308177 DMDP11532 3685 aa7.22□□□□□ -1.25
PCDHGC3-201ENST00000308177 FAM229AH3BQW9 127 aa7.21□□□□□ -1.25
PCDHGC3-201ENST00000308177 KLKP1Q107X0 134 aa7.21□□□□□ -1.26
PCDHGC3-201ENST00000308177 MRPL34Q9BQ48 92 aaKnown RBP7.21□□□□□ -1.26
PCDHGC3-201ENST00000308177 LAMA5O15230 3695 aa7.2□□□□□ -1.26
PCDHGC3-201ENST00000308177 TNP2Q05952 138 aa7.19□□□□□ -1.26
PCDHGC3-201ENST00000308177 KRTAP1-5Q9BYS1 174 aa7.19□□□□□ -1.26
PCDHGC3-201ENST00000308177 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.19□□□□□ -1.26
PCDHGC3-201ENST00000308177 C8orf87E5RJ46 101 aa7.19□□□□□ -1.26
PCDHGC3-201ENST00000308177 SPINK1P00995 79 aa7.19□□□□□ -1.26
PCDHGC3-201ENST00000308177 SPRR1AP35321 89 aa7.19□□□□□ -1.26
PCDHGC3-201ENST00000308177 C8orf17Q9NRJ1 99 aa7.19□□□□□ -1.26
PCDHGC3-201ENST00000308177 KMT2BQ9UMN6 2715 aaPredicted RBP7.18□□□□□ -1.26
PCDHGC3-201ENST00000308177 STAB2Q8WWQ8 2551 aa7.17□□□□□ -1.26
PCDHGC3-201ENST00000308177 A0A1B0GVX0 72 aa7.17□□□□□ -1.26
PCDHGC3-201ENST00000308177 DCHS1Q96JQ0 3298 aa7.17□□□□□ -1.26
PCDHGC3-201ENST00000308177 MXRA5Q9NR99 2828 aa7.15□□□□□ -1.26
PCDHGC3-201ENST00000308177 ASPMQ8IZT6 3477 aa7.15□□□□□ -1.26
PCDHGC3-201ENST00000308177 LOC101927531A0A1B0GV80 90 aa7.14□□□□□ -1.27
PCDHGC3-201ENST00000308177 K7ERS5 55 aa7.14□□□□□ -1.27
PCDHGC3-201ENST00000308177 H7BZZ5 65 aa7.14□□□□□ -1.27
PCDHGC3-201ENST00000308177 ACYP2P14621 99 aa7.14□□□□□ -1.27
PCDHGC3-201ENST00000308177 Q96NJ1 140 aa7.13□□□□□ -1.27
PCDHGC3-201ENST00000308177 SMR3BP02814 79 aaPredicted RBP7.13□□□□□ -1.27
PCDHGC3-201ENST00000308177 C7orf65Q6ZTY9 151 aa7.12□□□□□ -1.27
PCDHGC3-201ENST00000308177 C4orf26Q17RF5 130 aa7.12□□□□□ -1.27
PCDHGC3-201ENST00000308177 DSCR10P59022 87 aa7.12□□□□□ -1.27
PCDHGC3-201ENST00000308177 LINC00336Q6ZUF6 198 aa7.12□□□□□ -1.27
PCDHGC3-201ENST00000308177 ZFHX4Q86UP3 3567 aa7.11□□□□□ -1.27
PCDHGC3-201ENST00000308177 PMAIP1Q13794 54 aa7.1□□□□□ -1.27
PCDHGC3-201ENST00000308177 LINC00304Q8N9R0 145 aa7.1□□□□□ -1.27
PCDHGC3-201ENST00000308177 SPAG11AQ6PDA7 123 aa7.09□□□□□ -1.28
PCDHGC3-201ENST00000308177 OCR1Q9BZK8 76 aa7.08□□□□□ -1.28
PCDHGC3-201ENST00000308177 PLAC8Q9NZF1 115 aa7.08□□□□□ -1.28
PCDHGC3-201ENST00000308177 TENM4Q6N022 2769 aa7.06□□□□□ -1.28
PCDHGC3-201ENST00000308177 SPRR1BP22528 89 aa7.04□□□□□ -1.28
PCDHGC3-201ENST00000308177 A0A1B0GU69 56 aa7.03□□□□□ -1.28
PCDHGC3-201ENST00000308177 COA5Q86WW8 74 aa7.03□□□□□ -1.28
PCDHGC3-201ENST00000308177 IGLV8-61A0A075B6I0 122 aa7.02□□□□□ -1.29
PCDHGC3-201ENST00000308177 CD164Q04900 197 aa7.01□□□□□ -1.29
PCDHGC3-201ENST00000308177 SMG1Q96Q15 3661 aaKnown RBP7.01□□□□□ -1.29
PCDHGC3-201ENST00000308177 KRTAP4-16G5E9R7 235 aaPredicted RBP7.01□□□□□ -1.29
PCDHGC3-201ENST00000308177 CYP4F30PQ9H0H9 118 aa7□□□□□ -1.29
PCDHGC3-201ENST00000308177 ATP11AUNQ6ZP68 121 aa6.99□□□□□ -1.29
PCDHGC3-201ENST00000308177 C9orf92A6NGG3 77 aa6.98□□□□□ -1.29
PCDHGC3-201ENST00000308177 A8MUN3 132 aa6.97□□□□□ -1.29
PCDHGC3-201ENST00000308177 FAM229BQ4G0N7 80 aa6.96□□□□□ -1.3
PCDHGC3-201ENST00000308177 PANO1I0J062 215 aa6.96□□□□□ -1.3
PCDHGC3-201ENST00000308177 SPANXA2-OT1Q8N9U9 137 aa6.96□□□□□ -1.3
PCDHGC3-201ENST00000308177 LINC00472Q9H8W2 130 aa6.95□□□□□ -1.3
PCDHGC3-201ENST00000308177 Q6ZR54 194 aa6.94□□□□□ -1.3
PCDHGC3-201ENST00000308177 MMP24-AS1A0A0U1RRL7 71 aa6.93□□□□□ -1.3
PCDHGC3-201ENST00000308177 PRR26Q8N8Z3 221 aa6.93□□□□□ -1.3
PCDHGC3-201ENST00000308177 SPENQ96T58 3664 aaKnown RBP6.92□□□□□ -1.3
PCDHGC3-201ENST00000308177 KRTAP10-2P60368 255 aa6.92□□□□□ -1.3
PCDHGC3-201ENST00000308177 CYSTM1Q9H1C7 97 aa6.92□□□□□ -1.3
PCDHGC3-201ENST00000308177 DMBT1Q9UGM3 2413 aaPredicted RBP6.91□□□□□ -1.3
PCDHGC3-201ENST00000308177 KRTAP10-1P60331 282 aa6.89□□□□□ -1.31
PCDHGC3-201ENST00000308177 CSMD1Q96PZ7 3565 aa6.89□□□□□ -1.31
PCDHGC3-201ENST00000308177 Q6ZRN7 208 aaPredicted RBP6.88□□□□□ -1.31
PCDHGC3-201ENST00000308177 KRTAP7-1Q8IUC3 87 aa6.88□□□□□ -1.31
PCDHGC3-201ENST00000308177 J3QL48 77 aa6.86□□□□□ -1.31
PCDHGC3-201ENST00000308177 CELSR1Q9NYQ6 3014 aa6.86□□□□□ -1.31
PCDHGC3-201ENST00000308177 LINC00483Q53H64 154 aa6.86□□□□□ -1.31
PCDHGC3-201ENST00000308177 PDZD2O15018 2839 aa6.86□□□□□ -1.31
PCDHGC3-201ENST00000308177 KRTAP11-1Q8IUC1 163 aa6.84□□□□□ -1.31
PCDHGC3-201ENST00000308177 IGLV7-46A0A075B6I9 117 aa6.83□□□□□ -1.32
PCDHGC3-201ENST00000308177 FLG2Q5D862 2391 aaPredicted RBP6.83□□□□□ -1.32
PCDHGC3-201ENST00000308177 TENM1Q9UKZ4 2725 aa6.83□□□□□ -1.32
PCDHGC3-201ENST00000308177 TENM3Q9P273 2699 aa6.82□□□□□ -1.32
PCDHGC3-201ENST00000308177 LCE6AA0A183 80 aa6.82□□□□□ -1.32
PCDHGC3-201ENST00000308177 Q1T7F1 81 aa6.82□□□□□ -1.32
PCDHGC3-201ENST00000308177 Q8N1X5 172 aa6.81□□□□□ -1.32
PCDHGC3-201ENST00000308177 UQCR11O14957 56 aa6.81□□□□□ -1.32
PCDHGC3-201ENST00000308177 H3BS24 57 aa6.81□□□□□ -1.32
PCDHGC3-201ENST00000308177 HRES1P13985 223 aa6.79□□□□□ -1.32
PCDHGC3-201ENST00000308177 Q8N9P0 234 aaPredicted RBP6.77□□□□□ -1.33
PCDHGC3-201ENST00000308177 OTOGQ6ZRI0 2925 aa6.76□□□□□ -1.33
PCDHGC3-201ENST00000308177 KRTAP29-1A8MX34 341 aaPredicted RBP6.74□□□□□ -1.33
PCDHGC3-201ENST00000308177 Q5XG85 94 aa6.74□□□□□ -1.33
PCDHGC3-201ENST00000308177 SVEP1Q4LDE5 3571 aa6.74□□□□□ -1.33
PCDHGC3-201ENST00000308177 VWFP04275 2813 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms