RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 IGFL1Q6UW32 110 aa5.83□□□□□ -1.48
PTPRE-202ENST00000306042 FAM104AQ969W3 186 aa5.83□□□□□ -1.48
PTPRE-202ENST00000306042 A0A087WVE0 104 aa5.83□□□□□ -1.48
PTPRE-202ENST00000306042 LOC110117498A0A087WWA1 95 aa5.83□□□□□ -1.48
PTPRE-202ENST00000306042 ERC2-IT1O76042 136 aa5.83□□□□□ -1.48
PTPRE-202ENST00000306042 SEC61BP60468 96 aaKnown RBP5.83□□□□□ -1.48
PTPRE-202ENST00000306042 Q8N377 158 aa5.83□□□□□ -1.48
PTPRE-202ENST00000306042 PRR15LQ9BU68 103 aa5.82□□□□□ -1.48
PTPRE-202ENST00000306042 CXCL6P80162 114 aa5.82□□□□□ -1.48
PTPRE-202ENST00000306042 C5orf47Q569G3 176 aa5.82□□□□□ -1.48
PTPRE-202ENST00000306042 PRR26Q8N8Z3 221 aa5.82□□□□□ -1.48
PTPRE-202ENST00000306042 MXRA5Q9NR99 2828 aa5.82□□□□□ -1.48
PTPRE-202ENST00000306042 SERP2Q8N6R1 65 aa5.81□□□□□ -1.48
PTPRE-202ENST00000306042 SNURFQ9Y675 71 aa5.8□□□□□ -1.48
PTPRE-202ENST00000306042 IGLV7-46A0A075B6I9 117 aa5.8□□□□□ -1.48
PTPRE-202ENST00000306042 H0Y9P7 68 aa5.8□□□□□ -1.48
PTPRE-202ENST00000306042 C9orf92A6NGG3 77 aa5.8□□□□□ -1.48
PTPRE-202ENST00000306042 UQCRQO14949 82 aa5.8□□□□□ -1.48
PTPRE-202ENST00000306042 TRBV7-7A0A0K0K1E9 115 aa5.79□□□□□ -1.48
PTPRE-202ENST00000306042 PCOTHQ58A44 107 aa5.79□□□□□ -1.48
PTPRE-202ENST00000306042 ASPMQ8IZT6 3477 aa5.79□□□□□ -1.48
PTPRE-202ENST00000306042 TP53AIP1Q9HCN2 124 aa5.79□□□□□ -1.48
PTPRE-202ENST00000306042 FBN2P35556 2912 aa5.78□□□□□ -1.48
PTPRE-202ENST00000306042 KRTAP26-1Q6PEX3 210 aa5.78□□□□□ -1.48
PTPRE-202ENST00000306042 A0A0G2JQZ4 141 aa5.77□□□□□ -1.49
PTPRE-202ENST00000306042 TRAV7A0A075B6U4 112 aa5.77□□□□□ -1.49
PTPRE-202ENST00000306042 NDUFC1O43677 76 aa5.77□□□□□ -1.49
PTPRE-202ENST00000306042 OBSCN-AS1Q96MR7 158 aa5.77□□□□□ -1.49
PTPRE-202ENST00000306042 Q6ZSA8 131 aa5.77□□□□□ -1.49
PTPRE-202ENST00000306042 A8MWP4 228 aa5.76□□□□□ -1.49
PTPRE-202ENST00000306042 SMIM29Q86T20 159 aa5.75□□□□□ -1.49
PTPRE-202ENST00000306042 SMCPP49901 116 aaPredicted RBP5.75□□□□□ -1.49
PTPRE-202ENST00000306042 DSCR10P59022 87 aa5.75□□□□□ -1.49
PTPRE-202ENST00000306042 PDZD2O15018 2839 aa5.74□□□□□ -1.49
PTPRE-202ENST00000306042 CD164Q04900 197 aa5.74□□□□□ -1.49
PTPRE-202ENST00000306042 M0R2T5 61 aa5.74□□□□□ -1.49
PTPRE-202ENST00000306042 WDFY3Q8IZQ1 3526 aa5.74□□□□□ -1.49
PTPRE-202ENST00000306042 C1orf64Q8NEQ6 169 aa5.74□□□□□ -1.49
PTPRE-202ENST00000306042 V9GYY9 64 aa5.73□□□□□ -1.49
PTPRE-202ENST00000306042 MRPL34Q9BQ48 92 aaKnown RBP5.72□□□□□ -1.49
PTPRE-202ENST00000306042 COX7CP15954 63 aa5.72□□□□□ -1.49
PTPRE-202ENST00000306042 PRO0461Q9UI25 63 aa5.71□□□□□ -1.49
PTPRE-202ENST00000306042 C7orf65Q6ZTY9 151 aa5.71□□□□□ -1.5
PTPRE-202ENST00000306042 A0A1B0GVX0 72 aa5.7□□□□□ -1.5
PTPRE-202ENST00000306042 Q6ZRN7 208 aaPredicted RBP5.7□□□□□ -1.5
PTPRE-202ENST00000306042 FP248Q71RG6 208 aaPredicted RBP5.7□□□□□ -1.5
PTPRE-202ENST00000306042 K7EQZ3 153 aa5.69□□□□□ -1.5
PTPRE-202ENST00000306042 C8orf17Q9NRJ1 99 aa5.69□□□□□ -1.5
PTPRE-202ENST00000306042 ATP5EP56381 51 aaPredicted RBP5.69□□□□□ -1.5
PTPRE-202ENST00000306042 OTOGQ6ZRI0 2925 aa5.69□□□□□ -1.5
PTPRE-202ENST00000306042 Q8N1X5 172 aa5.68□□□□□ -1.5
PTPRE-202ENST00000306042 DMBT1Q9UGM3 2413 aaPredicted RBP5.68□□□□□ -1.5
PTPRE-202ENST00000306042 TRAV22A0A0B4J277 110 aa5.68□□□□□ -1.5
PTPRE-202ENST00000306042 TMEM254Q8TBM7 123 aa5.68□□□□□ -1.5
PTPRE-202ENST00000306042 IGLV5-48A0A075B6I7 105 aa5.68□□□□□ -1.5
PTPRE-202ENST00000306042 PRR15Q8IV56 129 aa5.68□□□□□ -1.5
PTPRE-202ENST00000306042 SPRR1AP35321 89 aa5.67□□□□□ -1.5
PTPRE-202ENST00000306042 PANO1I0J062 215 aa5.67□□□□□ -1.5
PTPRE-202ENST00000306042 A0A1W2PNM2 257 aa5.67□□□□□ -1.5
PTPRE-202ENST00000306042 Q8NDZ9 215 aa5.66□□□□□ -1.5
PTPRE-202ENST00000306042 LOC101927531A0A1B0GV80 90 aa5.63□□□□□ -1.51
PTPRE-202ENST00000306042 MPLKIPQ8TAP9 179 aa5.63□□□□□ -1.51
PTPRE-202ENST00000306042 SMG1Q96Q15 3661 aaKnown RBP5.62□□□□□ -1.51
PTPRE-202ENST00000306042 H3BPC8 53 aa5.62□□□□□ -1.51
PTPRE-202ENST00000306042 NBPF19A0A087WUL8 3843 aa5.6□□□□□ -1.51
PTPRE-202ENST00000306042 ACYP2P14621 99 aa5.6□□□□□ -1.51
PTPRE-202ENST00000306042 SPRR1BP22528 89 aa5.59□□□□□ -1.51
PTPRE-202ENST00000306042 ZFHX4Q86UP3 3567 aa5.59□□□□□ -1.51
PTPRE-202ENST00000306042 CCDC179H3BU77 68 aa5.59□□□□□ -1.52
PTPRE-202ENST00000306042 TENM1Q9UKZ4 2725 aa5.57□□□□□ -1.52
PTPRE-202ENST00000306042 TENM2Q9NT68 2774 aa5.56□□□□□ -1.52
PTPRE-202ENST00000306042 FLG2Q5D862 2391 aaPredicted RBP5.56□□□□□ -1.52
PTPRE-202ENST00000306042 ZFHX3Q15911 3703 aa5.56□□□□□ -1.52
PTPRE-202ENST00000306042 TENM3Q9P273 2699 aa5.56□□□□□ -1.52
PTPRE-202ENST00000306042 CELSR1Q9NYQ6 3014 aa5.55□□□□□ -1.52
PTPRE-202ENST00000306042 PKD1L1Q8TDX9 2849 aa5.52□□□□□ -1.53
PTPRE-202ENST00000306042 A6NED7 52 aa5.52□□□□□ -1.53
PTPRE-202ENST00000306042 LINC00483Q53H64 154 aa5.51□□□□□ -1.53
PTPRE-202ENST00000306042 IGLV8-61A0A075B6I0 122 aa5.51□□□□□ -1.53
PTPRE-202ENST00000306042 BRK1Q8WUW1 75 aa5.51□□□□□ -1.53
PTPRE-202ENST00000306042 A0A087X002 238 aa5.5□□□□□ -1.53
PTPRE-202ENST00000306042 C1orf195Q5TG92 126 aa5.5□□□□□ -1.53
PTPRE-202ENST00000306042 KRTAP4-16G5E9R7 235 aaPredicted RBP5.49□□□□□ -1.53
PTPRE-202ENST00000306042 FBN1P35555 2871 aaKnown RBP5.48□□□□□ -1.53
PTPRE-202ENST00000306042 KRTAP11-1Q8IUC1 163 aa5.47□□□□□ -1.53
PTPRE-202ENST00000306042 RPS29P62273 56 aaKnown RBP5.46□□□□□ -1.54
PTPRE-202ENST00000306042 A0A1B0GU69 56 aa5.46□□□□□ -1.54
PTPRE-202ENST00000306042 SMIM26A0A096LP01 95 aa5.46□□□□□ -1.54
PTPRE-202ENST00000306042 HRES1P13985 223 aa5.45□□□□□ -1.54
PTPRE-202ENST00000306042 ZCCHC13Q8WW36 166 aaKnown RBP5.44□□□□□ -1.54
PTPRE-202ENST00000306042 KRTAP7-1Q8IUC3 87 aa5.43□□□□□ -1.54
PTPRE-202ENST00000306042 VWFP04275 2813 aa5.42□□□□□ -1.54
PTPRE-202ENST00000306042 LINC00472Q9H8W2 130 aa5.42□□□□□ -1.54
PTPRE-202ENST00000306042 TGP01266 2768 aa5.41□□□□□ -1.54
PTPRE-202ENST00000306042 CSMD1Q96PZ7 3565 aa5.41□□□□□ -1.54
PTPRE-202ENST00000306042 SPENQ96T58 3664 aaKnown RBP5.41□□□□□ -1.54
PTPRE-202ENST00000306042 CSAG1Q6PB30 78 aa5.4□□□□□ -1.54
PTPRE-202ENST00000306042 LINC01600Q96MT4 127 aa5.4□□□□□ -1.54
PTPRE-202ENST00000306042 MMP24-AS1A0A0U1RRL7 71 aa5.39□□□□□ -1.55
PTPRE-202ENST00000306042 PSPHP1O15172 72 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms