RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 M0R2T5 61 aa11.9□□□□□ -0.51
CTNND2-201ENST00000304623 ROMO1P60602 79 aa11.9□□□□□ -0.51
CTNND2-201ENST00000304623 ATRQ13535 2644 aa11.88□□□□□ -0.51
CTNND2-201ENST00000304623 Q6ZR54 194 aa11.88□□□□□ -0.51
CTNND2-201ENST00000304623 KRTAP1-5Q9BYS1 174 aa11.87□□□□□ -0.51
CTNND2-201ENST00000304623 ITPR3Q14573 2671 aa11.86□□□□□ -0.51
CTNND2-201ENST00000304623 ASB16-AS1Q495Z4 193 aa11.86□□□□□ -0.51
CTNND2-201ENST00000304623 H1FX-AS1Q4G0G2 97 aa11.84□□□□□ -0.51
CTNND2-201ENST00000304623 MAST4O15021 2626 aa11.83□□□□□ -0.52
CTNND2-201ENST00000304623 KRTAP29-1A8MX34 341 aaPredicted RBP11.81□□□□□ -0.52
CTNND2-201ENST00000304623 KRTAP4-16G5E9R7 235 aaPredicted RBP11.8□□□□□ -0.52
CTNND2-201ENST00000304623 SEC61BP60468 96 aaKnown RBP11.76□□□□□ -0.53
CTNND2-201ENST00000304623 M0QZ58 72 aa11.67□□□□□ -0.54
CTNND2-201ENST00000304623 KRTAP10-1P60331 282 aa11.67□□□□□ -0.54
CTNND2-201ENST00000304623 HELZ2Q9BYK8 2649 aaKnown RBP11.65□□□□□ -0.55
CTNND2-201ENST00000304623 SPATA8Q6RVD6 105 aa11.64□□□□□ -0.55
CTNND2-201ENST00000304623 STAB1Q9NY15 2570 aa11.64□□□□□ -0.55
CTNND2-201ENST00000304623 FLG2Q5D862 2391 aaPredicted RBP11.62□□□□□ -0.55
CTNND2-201ENST00000304623 Q5VSD8 79 aa11.6□□□□□ -0.55
CTNND2-201ENST00000304623 KRTAP10-2P60368 255 aa11.6□□□□□ -0.55
CTNND2-201ENST00000304623 PANO1I0J062 215 aa11.57□□□□□ -0.56
CTNND2-201ENST00000304623 GOLGB1Q14789 3259 aaKnown RBP11.56□□□□□ -0.56
CTNND2-201ENST00000304623 DNAH12Q6ZR08 3092 aa11.55□□□□□ -0.56
CTNND2-201ENST00000304623 ADM2Q7Z4H4 148 aa11.55□□□□□ -0.56
CTNND2-201ENST00000304623 AKAP13Q12802 2813 aa11.55□□□□□ -0.56
CTNND2-201ENST00000304623 NBEAL1Q6ZS30 2694 aa11.53□□□□□ -0.56
CTNND2-201ENST00000304623 CFAP46Q8IYW2 2715 aa11.52□□□□□ -0.57
CTNND2-201ENST00000304623 LCE6AA0A183 80 aa11.49□□□□□ -0.57
CTNND2-201ENST00000304623 CHD6Q8TD26 2715 aa11.49□□□□□ -0.57
CTNND2-201ENST00000304623 A0A087X002 238 aa11.49□□□□□ -0.57
CTNND2-201ENST00000304623 NOTCH2NLQ7Z3S9 236 aa11.49□□□□□ -0.57
CTNND2-201ENST00000304623 A6NN06 94 aa11.49□□□□□ -0.57
CTNND2-201ENST00000304623 DMBT1Q9UGM3 2413 aaPredicted RBP11.44□□□□□ -0.58
CTNND2-201ENST00000304623 KRTAP25-1Q3LHN0 102 aa11.41□□□□□ -0.58
CTNND2-201ENST00000304623 PLAC4Q8WY50 150 aa11.41□□□□□ -0.58
CTNND2-201ENST00000304623 RPS29P62273 56 aaKnown RBP11.39□□□□□ -0.59
CTNND2-201ENST00000304623 CEP350Q5VT06 3117 aa11.39□□□□□ -0.59
CTNND2-201ENST00000304623 CENPEQ02224 2701 aa11.38□□□□□ -0.59
CTNND2-201ENST00000304623 UNC79Q9P2D8 2635 aa11.37□□□□□ -0.59
CTNND2-201ENST00000304623 KRTAP16-1A8MUX0 517 aa11.34□□□□□ -0.59
CTNND2-201ENST00000304623 KRTAP11-1Q8IUC1 163 aa11.33□□□□□ -0.6
CTNND2-201ENST00000304623 GCN1Q92616 2671 aaKnown RBP11.32□□□□□ -0.6
CTNND2-201ENST00000304623 TEX15Q9BXT5 2789 aa11.31□□□□□ -0.6
CTNND2-201ENST00000304623 A8MU10 97 aa11.29□□□□□ -0.6
CTNND2-201ENST00000304623 KRTAP7-1Q8IUC3 87 aa11.28□□□□□ -0.6
CTNND2-201ENST00000304623 CHD7Q9P2D1 2997 aa11.27□□□□□ -0.61
CTNND2-201ENST00000304623 NOTCH1P46531 2555 aa11.27□□□□□ -0.61
CTNND2-201ENST00000304623 TEP1Q99973 2627 aaKnown RBP11.26□□□□□ -0.61
CTNND2-201ENST00000304623 C5orf42Q9H799 3197 aa11.26□□□□□ -0.61
CTNND2-201ENST00000304623 Q6ZRN7 208 aaPredicted RBP11.23□□□□□ -0.61
CTNND2-201ENST00000304623 KRTAP13-1Q8IUC0 172 aa11.21□□□□□ -0.62
CTNND2-201ENST00000304623 A8MUU9 505 aa11.19□□□□□ -0.62
CTNND2-201ENST00000304623 KRTAP13-2Q52LG2 175 aa11.15□□□□□ -0.62
CTNND2-201ENST00000304623 COL6A5A8TX70 2615 aa11.13□□□□□ -0.63
CTNND2-201ENST00000304623 STAB2Q8WWQ8 2551 aa11.12□□□□□ -0.63
CTNND2-201ENST00000304623 CHD9Q3L8U1 2897 aa11.09□□□□□ -0.63
CTNND2-201ENST00000304623 NBEAL2Q6ZNJ1 2754 aa11.06□□□□□ -0.64
CTNND2-201ENST00000304623 C20orf166-AS1Q96NR2 134 aa11.06□□□□□ -0.64
CTNND2-201ENST00000304623 CFAP54Q96N23 3096 aa11.06□□□□□ -0.64
CTNND2-201ENST00000304623 NDUFAF8A1L188 74 aa11.06□□□□□ -0.64
CTNND2-201ENST00000304623 MGAQ8IWI9 3026 aa11.03□□□□□ -0.64
CTNND2-201ENST00000304623 ZNF292O60281 2723 aa10.97□□□□□ -0.65
CTNND2-201ENST00000304623 SETXQ7Z333 2677 aaKnown RBP10.97□□□□□ -0.65
CTNND2-201ENST00000304623 A0A0C4DFX4 3053 aa10.92□□□□□ -0.66
CTNND2-201ENST00000304623 TNP1P09430 55 aa10.9□□□□□ -0.66
CTNND2-201ENST00000304623 UBR5O95071 2799 aaPredicted RBP10.87□□□□□ -0.67
CTNND2-201ENST00000304623 NSD1Q96L73 2696 aaPredicted RBP10.87□□□□□ -0.67
CTNND2-201ENST00000304623 TRANK1O15050 2925 aa10.8□□□□□ -0.68
CTNND2-201ENST00000304623 MAP1AP78559 2803 aaPredicted RBP10.79□□□□□ -0.68
CTNND2-201ENST00000304623 PCNTO95613 3336 aa10.79□□□□□ -0.68
CTNND2-201ENST00000304623 C10orf95Q9H7T3 257 aa10.75□□□□□ -0.69
CTNND2-201ENST00000304623 UTRNP46939 3433 aa10.74□□□□□ -0.69
CTNND2-201ENST00000304623 PP632Q6XCG6 107 aa10.73□□□□□ -0.69
CTNND2-201ENST00000304623 BAHCC1Q9P281 2608 aa10.72□□□□□ -0.69
CTNND2-201ENST00000304623 IGSF10Q6WRI0 2623 aa10.72□□□□□ -0.69
CTNND2-201ENST00000304623 HTTP42858 3142 aa10.69□□□□□ -0.7
CTNND2-201ENST00000304623 ITPR2Q14571 2701 aa10.67□□□□□ -0.7
CTNND2-201ENST00000304623 WDFY4Q6ZS81 3184 aa10.63□□□□□ -0.71
CTNND2-201ENST00000304623 RANBP2P49792 3224 aaKnown RBP10.62□□□□□ -0.71
CTNND2-201ENST00000304623 DSPP15924 2871 aaKnown RBP10.62□□□□□ -0.71
CTNND2-201ENST00000304623 FRYQ5TBA9 3013 aa10.6□□□□□ -0.71
CTNND2-201ENST00000304623 H0YAA0 97 aa10.57□□□□□ -0.72
CTNND2-201ENST00000304623 ITPR1Q14643 2758 aa10.56□□□□□ -0.72
CTNND2-201ENST00000304623 KRTAP1-4P0C5Y4 121 aa10.56□□□□□ -0.72
CTNND2-201ENST00000304623 KMT2BQ9UMN6 2715 aaPredicted RBP10.54□□□□□ -0.72
CTNND2-201ENST00000304623 XP32Q5T750 250 aa10.52□□□□□ -0.73
CTNND2-201ENST00000304623 LAMA2P24043 3122 aaKnown RBP10.51□□□□□ -0.73
CTNND2-201ENST00000304623 APCP25054 2843 aa10.51□□□□□ -0.73
CTNND2-201ENST00000304623 TRIOO75962 3097 aa10.5□□□□□ -0.73
CTNND2-201ENST00000304623 P0C880 135 aa10.5□□□□□ -0.73
CTNND2-201ENST00000304623 MKI67P46013 3256 aaKnown RBP10.43□□□□□ -0.74
CTNND2-201ENST00000304623 KRTAP10-8P60410 259 aa10.42□□□□□ -0.74
CTNND2-201ENST00000304623 KALRNO60229 2985 aa10.4□□□□□ -0.74
CTNND2-201ENST00000304623 UTP20O75691 2785 aaKnown RBP10.38□□□□□ -0.75
CTNND2-201ENST00000304623 PRUNE2Q8WUY3 3088 aa10.38□□□□□ -0.75
CTNND2-201ENST00000304623 KRTAP21-3Q3LHN1 58 aa10.38□□□□□ -0.75
CTNND2-201ENST00000304623 LAMA3Q16787 3333 aa10.37□□□□□ -0.75
CTNND2-201ENST00000304623 VPS13AQ96RL7 3174 aa10.32□□□□□ -0.76
CTNND2-201ENST00000304623 HIVEP1P15822 2718 aa10.32□□□□□ -0.76
CTNND2-201ENST00000304623 FREM2Q5SZK8 3169 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms