RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 VCANP13611 3396 aa9.96□□□□□ -0.81
BRD3-201ENST00000303407 COX6B2Q6YFQ2 88 aa9.96□□□□□ -0.81
BRD3-201ENST00000303407 CELSR3Q9NYQ7 3312 aa9.95□□□□□ -0.82
BRD3-201ENST00000303407 VPS13AQ96RL7 3174 aa9.95□□□□□ -0.82
BRD3-201ENST00000303407 LAMA1P25391 3075 aa9.95□□□□□ -0.82
BRD3-201ENST00000303407 ATRQ13535 2644 aa9.94□□□□□ -0.82
BRD3-201ENST00000303407 CFAP46Q8IYW2 2715 aa9.93□□□□□ -0.82
BRD3-201ENST00000303407 Q5XG85 94 aa9.93□□□□□ -0.82
BRD3-201ENST00000303407 HELZ2Q9BYK8 2649 aaKnown RBP9.93□□□□□ -0.82
BRD3-201ENST00000303407 RBM12B-AS1Q9P1G2 102 aa9.93□□□□□ -0.82
BRD3-201ENST00000303407 SPTBN5Q9NRC6 3674 aaKnown RBP9.92□□□□□ -0.82
BRD3-201ENST00000303407 FLNBO75369 2602 aaKnown RBP9.91□□□□□ -0.82
BRD3-201ENST00000303407 Q8N9P0 234 aaPredicted RBP9.88□□□□□ -0.83
BRD3-201ENST00000303407 KRTAP4-16G5E9R7 235 aaPredicted RBP9.87□□□□□ -0.83
BRD3-201ENST00000303407 Q75L30 129 aa9.86□□□□□ -0.83
BRD3-201ENST00000303407 A0A0D9SG42 100 aa9.86□□□□□ -0.83
BRD3-201ENST00000303407 FP248Q71RG6 208 aaPredicted RBP9.86□□□□□ -0.83
BRD3-201ENST00000303407 MGAM2Q2M2H8 2515 aa9.86□□□□□ -0.83
BRD3-201ENST00000303407 LUZP6Q538Z0 58 aa9.85□□□□□ -0.83
BRD3-201ENST00000303407 ZCCHC13Q8WW36 166 aaKnown RBP9.85□□□□□ -0.83
BRD3-201ENST00000303407 USP24Q9UPU5 2620 aa9.84□□□□□ -0.83
BRD3-201ENST00000303407 FRYQ5TBA9 3013 aa9.84□□□□□ -0.84
BRD3-201ENST00000303407 Q5W150 140 aa9.83□□□□□ -0.84
BRD3-201ENST00000303407 CENPEQ02224 2701 aa9.83□□□□□ -0.84
BRD3-201ENST00000303407 LINC01554Q52M75 96 aa9.83□□□□□ -0.84
BRD3-201ENST00000303407 LINC00483Q53H64 154 aa9.82□□□□□ -0.84
BRD3-201ENST00000303407 PANO1I0J062 215 aa9.81□□□□□ -0.84
BRD3-201ENST00000303407 LINC01558Q9Y6Z2 57 aa9.81□□□□□ -0.84
BRD3-201ENST00000303407 KRTAP10-2P60368 255 aa9.79□□□□□ -0.84
BRD3-201ENST00000303407 DSPP15924 2871 aaKnown RBP9.79□□□□□ -0.84
BRD3-201ENST00000303407 COL6A3P12111 3177 aa9.79□□□□□ -0.84
BRD3-201ENST00000303407 KRTAP10-1P60331 282 aa9.78□□□□□ -0.84
BRD3-201ENST00000303407 Q6ZSA8 131 aa9.76□□□□□ -0.85
BRD3-201ENST00000303407 MAST4O15021 2626 aa9.76□□□□□ -0.85
BRD3-201ENST00000303407 OXTP01178 125 aa9.76□□□□□ -0.85
BRD3-201ENST00000303407 A0A1B0GU33 70 aa9.73□□□□□ -0.85
BRD3-201ENST00000303407 IGSF10Q6WRI0 2623 aa9.72□□□□□ -0.85
BRD3-201ENST00000303407 Q5VV11 94 aa9.72□□□□□ -0.85
BRD3-201ENST00000303407 CHD6Q8TD26 2715 aa9.7□□□□□ -0.86
BRD3-201ENST00000303407 Q6ZR54 194 aa9.67□□□□□ -0.86
BRD3-201ENST00000303407 KRTAP29-1A8MX34 341 aaPredicted RBP9.66□□□□□ -0.86
BRD3-201ENST00000303407 KRTAP11-1Q8IUC1 163 aa9.65□□□□□ -0.86
BRD3-201ENST00000303407 KRTAP7-1Q8IUC3 87 aa9.64□□□□□ -0.87
BRD3-201ENST00000303407 H3BS24 57 aa9.63□□□□□ -0.87
BRD3-201ENST00000303407 GCN1Q92616 2671 aaKnown RBP9.63□□□□□ -0.87
BRD3-201ENST00000303407 S4R3F8 94 aa9.63□□□□□ -0.87
BRD3-201ENST00000303407 SPINK7P58062 85 aa9.63□□□□□ -0.87
BRD3-201ENST00000303407 LCE6AA0A183 80 aa9.61□□□□□ -0.87
BRD3-201ENST00000303407 TEX15Q9BXT5 2789 aa9.61□□□□□ -0.87
BRD3-201ENST00000303407 USP34Q70CQ2 3546 aa9.6□□□□□ -0.87
BRD3-201ENST00000303407 Q5VSD8 79 aa9.59□□□□□ -0.87
BRD3-201ENST00000303407 LRBAP50851 2863 aa9.59□□□□□ -0.87
BRD3-201ENST00000303407 BOD1L1Q8NFC6 3051 aa9.59□□□□□ -0.87
BRD3-201ENST00000303407 TNRC18O15417 2968 aaPredicted RBP9.59□□□□□ -0.87
BRD3-201ENST00000303407 Q6ZRN7 208 aaPredicted RBP9.58□□□□□ -0.88
BRD3-201ENST00000303407 KALRNO60229 2985 aa9.57□□□□□ -0.88
BRD3-201ENST00000303407 A0A087X002 238 aa9.57□□□□□ -0.88
BRD3-201ENST00000303407 DMAC1Q96GE9 116 aa9.57□□□□□ -0.88
BRD3-201ENST00000303407 FRYLO94915 3013 aa9.57□□□□□ -0.88
BRD3-201ENST00000303407 FREM2Q5SZK8 3169 aa9.56□□□□□ -0.88
BRD3-201ENST00000303407 REV3LO60673 3130 aa9.56□□□□□ -0.88
BRD3-201ENST00000303407 A0A0A0MQY5 61 aa9.56□□□□□ -0.88
BRD3-201ENST00000303407 ATMQ13315 3056 aa9.53□□□□□ -0.88
BRD3-201ENST00000303407 UNC79Q9P2D8 2635 aa9.53□□□□□ -0.88
BRD3-201ENST00000303407 SETXQ7Z333 2677 aaKnown RBP9.53□□□□□ -0.88
BRD3-201ENST00000303407 SPEGQ15772 3267 aa9.53□□□□□ -0.88
BRD3-201ENST00000303407 NOTCH2NLQ7Z3S9 236 aa9.52□□□□□ -0.88
BRD3-201ENST00000303407 ADGRG4Q8IZF6 3080 aa9.52□□□□□ -0.89
BRD3-201ENST00000303407 NBEAL2Q6ZNJ1 2754 aa9.51□□□□□ -0.89
BRD3-201ENST00000303407 NBEAQ8NFP9 2946 aa9.51□□□□□ -0.89
BRD3-201ENST00000303407 CSAG1Q6PB30 78 aa9.51□□□□□ -0.89
BRD3-201ENST00000303407 EYSQ5T1H1 3165 aa9.5□□□□□ -0.89
BRD3-201ENST00000303407 MAP1AP78559 2803 aaPredicted RBP9.49□□□□□ -0.89
BRD3-201ENST00000303407 PRAC1Q96KF2 57 aa9.49□□□□□ -0.89
BRD3-201ENST00000303407 TEP1Q99973 2627 aaKnown RBP9.48□□□□□ -0.89
BRD3-201ENST00000303407 DMXL2Q8TDJ6 3036 aa9.46□□□□□ -0.9
BRD3-201ENST00000303407 KRTAP13-1Q8IUC0 172 aa9.44□□□□□ -0.9
BRD3-201ENST00000303407 ASB16-AS1Q495Z4 193 aa9.42□□□□□ -0.9
BRD3-201ENST00000303407 CAMK2N1Q7Z7J9 78 aa9.42□□□□□ -0.9
BRD3-201ENST00000303407 COL12A1Q99715 3063 aa9.39□□□□□ -0.91
BRD3-201ENST00000303407 MYO15AQ9UKN7 3530 aa9.38□□□□□ -0.91
BRD3-201ENST00000303407 H1FX-AS1Q4G0G2 97 aa9.37□□□□□ -0.91
BRD3-201ENST00000303407 ITPR1Q14643 2758 aa9.35□□□□□ -0.91
BRD3-201ENST00000303407 M0R2T5 61 aa9.35□□□□□ -0.91
BRD3-201ENST00000303407 SEC61BP60468 96 aaKnown RBP9.35□□□□□ -0.91
BRD3-201ENST00000303407 UTP20O75691 2785 aaKnown RBP9.35□□□□□ -0.91
BRD3-201ENST00000303407 COL6A5A8TX70 2615 aa9.34□□□□□ -0.91
BRD3-201ENST00000303407 KRTAP13-2Q52LG2 175 aa9.34□□□□□ -0.92
BRD3-201ENST00000303407 ZZEF1O43149 2961 aa9.32□□□□□ -0.92
BRD3-201ENST00000303407 RPS29P62273 56 aaKnown RBP9.31□□□□□ -0.92
BRD3-201ENST00000303407 R4GN34 69 aa9.3□□□□□ -0.92
BRD3-201ENST00000303407 ITPR2Q14571 2701 aa9.3□□□□□ -0.92
BRD3-201ENST00000303407 FLNCQ14315 2725 aa9.29□□□□□ -0.92
BRD3-201ENST00000303407 DMXL1Q9Y485 3027 aa9.29□□□□□ -0.92
BRD3-201ENST00000303407 NOTCH1P46531 2555 aa9.28□□□□□ -0.92
BRD3-201ENST00000303407 RPL37P61927 97 aaKnown RBP9.28□□□□□ -0.92
BRD3-201ENST00000303407 UBR5O95071 2799 aaPredicted RBP9.27□□□□□ -0.93
BRD3-201ENST00000303407 NBEAL1Q6ZS30 2694 aa9.26□□□□□ -0.93
BRD3-201ENST00000303407 CFAP47Q6ZTR5 3102 aa9.26□□□□□ -0.93
BRD3-201ENST00000303407 SPATA8Q6RVD6 105 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms