RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 SACSQ9NZJ4 4579 aa8.35□□□□□ -1.07
CHMP4C-201ENST00000297265 A0A1W2PNM2 257 aa8.35□□□□□ -1.07
CHMP4C-201ENST00000297265 KRTAP17-1Q9BYP8 105 aa8.34□□□□□ -1.07
CHMP4C-201ENST00000297265 C1orf137Q5JT78 98 aa8.34□□□□□ -1.07
CHMP4C-201ENST00000297265 SPRR1BP22528 89 aa8.33□□□□□ -1.08
CHMP4C-201ENST00000297265 UBE2AP49459 152 aa8.33□□□□□ -1.08
CHMP4C-201ENST00000297265 FAM30AQ9NZY2 134 aa8.32□□□□□ -1.08
CHMP4C-201ENST00000297265 IGLV8-61A0A075B6I0 122 aa8.32□□□□□ -1.08
CHMP4C-201ENST00000297265 PSORS1C2Q9UIG4 136 aa8.32□□□□□ -1.08
CHMP4C-201ENST00000297265 A0A087WVE0 104 aa8.31□□□□□ -1.08
CHMP4C-201ENST00000297265 A0A0G2JQZ4 141 aa8.31□□□□□ -1.08
CHMP4C-201ENST00000297265 FAM236AA0A1B0GUQ0 79 aa8.31□□□□□ -1.08
CHMP4C-201ENST00000297265 FAM236BA0A1B0GV22 79 aa8.31□□□□□ -1.08
CHMP4C-201ENST00000297265 HIST1H4AP62805 103 aaKnown RBP8.31□□□□□ -1.08
CHMP4C-201ENST00000297265 ATP5EP2Q5VTU8 51 aa8.31□□□□□ -1.08
CHMP4C-201ENST00000297265 SPRR4Q96PI1 79 aa8.3□□□□□ -1.08
CHMP4C-201ENST00000297265 IGFL1Q6UW32 110 aa8.29□□□□□ -1.08
CHMP4C-201ENST00000297265 Q8NBF4 154 aa8.29□□□□□ -1.08
CHMP4C-201ENST00000297265 ANAPC13Q9BS18 74 aa8.28□□□□□ -1.08
CHMP4C-201ENST00000297265 HAMPP81172 84 aa8.28□□□□□ -1.08
CHMP4C-201ENST00000297265 A0A1B0GW54 56 aa8.27□□□□□ -1.09
CHMP4C-201ENST00000297265 KRTAP10-1P60331 282 aa8.26□□□□□ -1.09
CHMP4C-201ENST00000297265 CXCL6P80162 114 aa8.26□□□□□ -1.09
CHMP4C-201ENST00000297265 Q6ZSA8 131 aa8.26□□□□□ -1.09
CHMP4C-201ENST00000297265 CIRBP-AS1Q8TBR5 109 aa8.26□□□□□ -1.09
CHMP4C-201ENST00000297265 LRP1BQ9NZR2 4599 aa8.25□□□□□ -1.09
CHMP4C-201ENST00000297265 CRYGAP11844 174 aa8.25□□□□□ -1.09
CHMP4C-201ENST00000297265 F8WEM9 126 aa8.24□□□□□ -1.09
CHMP4C-201ENST00000297265 NREPQ16612 68 aa8.23□□□□□ -1.09
CHMP4C-201ENST00000297265 ZNF861PO60384 105 aa8.23□□□□□ -1.09
CHMP4C-201ENST00000297265 SCXQ7RTU7 201 aa8.23□□□□□ -1.09
CHMP4C-201ENST00000297265 PKHD1P08F94 4074 aa8.23□□□□□ -1.09
CHMP4C-201ENST00000297265 LINC00483Q53H64 154 aa8.22□□□□□ -1.09
CHMP4C-201ENST00000297265 LCE6AA0A183 80 aa8.19□□□□□ -1.1
CHMP4C-201ENST00000297265 CCDC179H3BU77 68 aa8.19□□□□□ -1.1
CHMP4C-201ENST00000297265 IGLV7-43P04211 117 aa8.19□□□□□ -1.1
CHMP4C-201ENST00000297265 Q8N9L7 120 aa8.17□□□□□ -1.1
CHMP4C-201ENST00000297265 BIRC6Q9NR09 4857 aa8.17□□□□□ -1.1
CHMP4C-201ENST00000297265 RYR3Q15413 4870 aa8.17□□□□□ -1.1
CHMP4C-201ENST00000297265 ANAPC11Q9NYG5 84 aa8.17□□□□□ -1.1
CHMP4C-201ENST00000297265 ATOX1O00244 68 aa8.16□□□□□ -1.1
CHMP4C-201ENST00000297265 BPY2O14599 106 aa8.16□□□□□ -1.1
CHMP4C-201ENST00000297265 IGKV4-1P06312 121 aa8.16□□□□□ -1.1
CHMP4C-201ENST00000297265 VPS13BQ7Z7G8 4022 aa8.16□□□□□ -1.1
CHMP4C-201ENST00000297265 A0A087WSZ3 146 aa8.15□□□□□ -1.1
CHMP4C-201ENST00000297265 KMT2CQ8NEZ4 4911 aaKnown RBP8.15□□□□□ -1.1
CHMP4C-201ENST00000297265 RYR2Q92736 4967 aa8.14□□□□□ -1.11
CHMP4C-201ENST00000297265 DSCR10P59022 87 aa8.14□□□□□ -1.11
CHMP4C-201ENST00000297265 IGLV9-49A0A0B4J1Y8 123 aa8.13□□□□□ -1.11
CHMP4C-201ENST00000297265 ZNF706Q9Y5V0 76 aaPredicted RBP8.13□□□□□ -1.11
CHMP4C-201ENST00000297265 A0A1B0GVY2 172 aa8.11□□□□□ -1.11
CHMP4C-201ENST00000297265 COX7CP15954 63 aa8.11□□□□□ -1.11
CHMP4C-201ENST00000297265 RPL37AP61513 92 aaKnown RBP8.09□□□□□ -1.11
CHMP4C-201ENST00000297265 DEFB116Q30KQ4 102 aa8.09□□□□□ -1.11
CHMP4C-201ENST00000297265 DYNC1H1Q14204 4646 aaKnown RBP8.09□□□□□ -1.11
CHMP4C-201ENST00000297265 C9orf153Q5TBE3 101 aa8.09□□□□□ -1.12
CHMP4C-201ENST00000297265 LINC00336Q6ZUF6 198 aa8.09□□□□□ -1.12
CHMP4C-201ENST00000297265 SERP2Q8N6R1 65 aa8.09□□□□□ -1.12
CHMP4C-201ENST00000297265 UQCRQO14949 82 aa8.08□□□□□ -1.12
CHMP4C-201ENST00000297265 LINC00472Q9H8W2 130 aa8.08□□□□□ -1.12
CHMP4C-201ENST00000297265 K7EQZ3 153 aa8.07□□□□□ -1.12
CHMP4C-201ENST00000297265 MOBPQ13875 183 aa8.07□□□□□ -1.12
CHMP4C-201ENST00000297265 Q96NJ1 140 aa8.03□□□□□ -1.12
CHMP4C-201ENST00000297265 HRCT1Q6UXD1 115 aa8.02□□□□□ -1.12
CHMP4C-201ENST00000297265 CYSTM1Q9H1C7 97 aa8.02□□□□□ -1.12
CHMP4C-201ENST00000297265 APOBP04114 4563 aaKnown RBP8.01□□□□□ -1.13
CHMP4C-201ENST00000297265 TRAV7A0A075B6U4 112 aa8□□□□□ -1.13
CHMP4C-201ENST00000297265 A0A087X002 238 aa8□□□□□ -1.13
CHMP4C-201ENST00000297265 KRTAP1-4P0C5Y4 121 aa8□□□□□ -1.13
CHMP4C-201ENST00000297265 KRTAP13-2Q52LG2 175 aa7.99□□□□□ -1.13
CHMP4C-201ENST00000297265 C4orf48Q5BLP8 95 aa7.99□□□□□ -1.13
CHMP4C-201ENST00000297265 OCR1Q9BZK8 76 aa7.99□□□□□ -1.13
CHMP4C-201ENST00000297265 SMIM20Q8N5G0 67 aa7.98□□□□□ -1.13
CHMP4C-201ENST00000297265 A8MWP4 228 aa7.96□□□□□ -1.13
CHMP4C-201ENST00000297265 SSBP3-AS1Q7Z2R9 100 aa7.96□□□□□ -1.13
CHMP4C-201ENST00000297265 PRR15Q8IV56 129 aa7.96□□□□□ -1.13
CHMP4C-201ENST00000297265 FAT1Q14517 4588 aa7.95□□□□□ -1.14
CHMP4C-201ENST00000297265 HCG22E2RYF7 251 aa7.94□□□□□ -1.14
CHMP4C-201ENST00000297265 FAM229BQ4G0N7 80 aa7.94□□□□□ -1.14
CHMP4C-201ENST00000297265 KRTAP29-1A8MX34 341 aaPredicted RBP7.94□□□□□ -1.14
CHMP4C-201ENST00000297265 CD164Q04900 197 aa7.93□□□□□ -1.14
CHMP4C-201ENST00000297265 J3KT08 172 aa7.92□□□□□ -1.14
CHMP4C-201ENST00000297265 SMR3BP02814 79 aaPredicted RBP7.92□□□□□ -1.14
CHMP4C-201ENST00000297265 KRTAP10-4P60372 401 aaPredicted RBP7.92□□□□□ -1.14
CHMP4C-201ENST00000297265 C20orf197Q8N268 126 aa7.92□□□□□ -1.14
CHMP4C-201ENST00000297265 SS18L2Q9UHA2 77 aa7.92□□□□□ -1.14
CHMP4C-201ENST00000297265 EPPK1P58107 5090 aaKnown RBP7.91□□□□□ -1.14
CHMP4C-201ENST00000297265 WFDC13Q8IUB5 93 aa7.89□□□□□ -1.15
CHMP4C-201ENST00000297265 KLKP1Q107X0 134 aa7.89□□□□□ -1.15
CHMP4C-201ENST00000297265 SPINK6Q6UWN8 80 aa7.88□□□□□ -1.15
CHMP4C-201ENST00000297265 MMP24-AS1A0A0U1RRL7 71 aa7.87□□□□□ -1.15
CHMP4C-201ENST00000297265 PLA2G1BP04054 148 aaKnown RBP7.87□□□□□ -1.15
CHMP4C-201ENST00000297265 ASB16-AS1Q495Z4 193 aa7.86□□□□□ -1.15
CHMP4C-201ENST00000297265 SNURFQ9Y675 71 aa7.86□□□□□ -1.15
CHMP4C-201ENST00000297265 CASC2Q6XLA1 102 aa7.85□□□□□ -1.15
CHMP4C-201ENST00000297265 NDUFB1O75438 58 aa7.84□□□□□ -1.15
CHMP4C-201ENST00000297265 TMEM254Q8TBM7 123 aa7.84□□□□□ -1.15
CHMP4C-201ENST00000297265 H7BZZ5 65 aa7.83□□□□□ -1.16
CHMP4C-201ENST00000297265 Q5XG85 94 aa7.83□□□□□ -1.16
CHMP4C-201ENST00000297265 A0A0U1RQV1 116 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms