RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 BAHCC1Q9P281 2608 aa7.27□□□□□ -1.25
SNIP1-201ENST00000296215 C5orf42Q9H799 3197 aa7.25□□□□□ -1.25
SNIP1-201ENST00000296215 CASC10Q5T4H9 136 aa7.25□□□□□ -1.25
SNIP1-201ENST00000296215 LINC00472Q9H8W2 130 aa7.25□□□□□ -1.25
SNIP1-201ENST00000296215 PLA2G2DQ9UNK4 145 aa7.25□□□□□ -1.25
SNIP1-201ENST00000296215 FREM2Q5SZK8 3169 aa7.25□□□□□ -1.25
SNIP1-201ENST00000296215 WWC2-AS2Q96NR7 200 aa7.25□□□□□ -1.25
SNIP1-201ENST00000296215 Q8N1X5 172 aa7.24□□□□□ -1.25
SNIP1-201ENST00000296215 HELZ2Q9BYK8 2649 aaKnown RBP7.24□□□□□ -1.25
SNIP1-201ENST00000296215 TNP2Q05952 138 aa7.23□□□□□ -1.25
SNIP1-201ENST00000296215 IGLV5-52A0A0A0MRZ9 124 aa7.22□□□□□ -1.25
SNIP1-201ENST00000296215 DMBT1Q9UGM3 2413 aaPredicted RBP7.22□□□□□ -1.25
SNIP1-201ENST00000296215 MUC3AQ02505 3323 aa7.22□□□□□ -1.25
SNIP1-201ENST00000296215 CFAP54Q96N23 3096 aa7.21□□□□□ -1.26
SNIP1-201ENST00000296215 CHD7Q9P2D1 2997 aa7.2□□□□□ -1.26
SNIP1-201ENST00000296215 CHD9Q3L8U1 2897 aa7.2□□□□□ -1.26
SNIP1-201ENST00000296215 MGAQ8IWI9 3026 aa7.19□□□□□ -1.26
SNIP1-201ENST00000296215 NOTCH2NLQ7Z3S9 236 aa7.18□□□□□ -1.26
SNIP1-201ENST00000296215 MGAM2Q2M2H8 2515 aa7.17□□□□□ -1.26
SNIP1-201ENST00000296215 PLAC8Q9NZF1 115 aa7.17□□□□□ -1.26
SNIP1-201ENST00000296215 GIG44P09565 113 aaPredicted RBP7.17□□□□□ -1.26
SNIP1-201ENST00000296215 CSNK1G2-AS1Q8NCQ2 148 aa7.17□□□□□ -1.26
SNIP1-201ENST00000296215 TRANK1O15050 2925 aa7.17□□□□□ -1.26
SNIP1-201ENST00000296215 A0A1W2PPR1 153 aa7.16□□□□□ -1.26
SNIP1-201ENST00000296215 J3QL48 77 aa7.14□□□□□ -1.27
SNIP1-201ENST00000296215 PSORS1C2Q9UIG4 136 aa7.14□□□□□ -1.27
SNIP1-201ENST00000296215 SPACA4Q8TDM5 124 aa7.13□□□□□ -1.27
SNIP1-201ENST00000296215 ATRQ13535 2644 aa7.13□□□□□ -1.27
SNIP1-201ENST00000296215 VPS13AQ96RL7 3174 aa7.13□□□□□ -1.27
SNIP1-201ENST00000296215 K7EIL1 84 aa7.13□□□□□ -1.27
SNIP1-201ENST00000296215 SPRR1AP35321 89 aa7.13□□□□□ -1.27
SNIP1-201ENST00000296215 KRTAP24-1Q3LI83 254 aa7.13□□□□□ -1.27
SNIP1-201ENST00000296215 CAMK2N1Q7Z7J9 78 aa7.13□□□□□ -1.27
SNIP1-201ENST00000296215 Q96NJ1 140 aa7.12□□□□□ -1.27
SNIP1-201ENST00000296215 Q5W150 140 aa7.12□□□□□ -1.27
SNIP1-201ENST00000296215 TRIOO75962 3097 aa7.1□□□□□ -1.27
SNIP1-201ENST00000296215 RPL37P61927 97 aaKnown RBP7.1□□□□□ -1.27
SNIP1-201ENST00000296215 LINC00304Q8N9R0 145 aa7.1□□□□□ -1.27
SNIP1-201ENST00000296215 KRTAP11-1Q8IUC1 163 aa7.09□□□□□ -1.27
SNIP1-201ENST00000296215 WDFY4Q6ZS81 3184 aa7.08□□□□□ -1.28
SNIP1-201ENST00000296215 H3BNG1 76 aa7.08□□□□□ -1.28
SNIP1-201ENST00000296215 COL6A3P12111 3177 aa7.08□□□□□ -1.28
SNIP1-201ENST00000296215 KRTAP26-1Q6PEX3 210 aa7.07□□□□□ -1.28
SNIP1-201ENST00000296215 H1FX-AS1Q4G0G2 97 aa7.07□□□□□ -1.28
SNIP1-201ENST00000296215 NBEAQ8NFP9 2946 aa7.06□□□□□ -1.28
SNIP1-201ENST00000296215 PANO1I0J062 215 aa7.06□□□□□ -1.28
SNIP1-201ENST00000296215 KRTAP4-16G5E9R7 235 aaPredicted RBP7.02□□□□□ -1.28
SNIP1-201ENST00000296215 CELSR3Q9NYQ7 3312 aa7.02□□□□□ -1.29
SNIP1-201ENST00000296215 NOTCH1P46531 2555 aa7.02□□□□□ -1.29
SNIP1-201ENST00000296215 SPTBN5Q9NRC6 3674 aaKnown RBP7.01□□□□□ -1.29
SNIP1-201ENST00000296215 ANAPC11Q9NYG5 84 aa7□□□□□ -1.29
SNIP1-201ENST00000296215 REV3LO60673 3130 aa7□□□□□ -1.29
SNIP1-201ENST00000296215 FRYLO94915 3013 aa6.99□□□□□ -1.29
SNIP1-201ENST00000296215 WDFY3Q8IZQ1 3526 aa6.99□□□□□ -1.29
SNIP1-201ENST00000296215 ITPR3Q14573 2671 aa6.99□□□□□ -1.29
SNIP1-201ENST00000296215 SPRR1BP22528 89 aa6.96□□□□□ -1.29
SNIP1-201ENST00000296215 USP24Q9UPU5 2620 aa6.94□□□□□ -1.3
SNIP1-201ENST00000296215 LOC400499M0QZD8 3231 aa6.94□□□□□ -1.3
SNIP1-201ENST00000296215 P0C880 135 aa6.94□□□□□ -1.3
SNIP1-201ENST00000296215 ITPR1Q14643 2758 aa6.93□□□□□ -1.3
SNIP1-201ENST00000296215 DMDP11532 3685 aa6.92□□□□□ -1.3
SNIP1-201ENST00000296215 ASPMQ8IZT6 3477 aa6.92□□□□□ -1.3
SNIP1-201ENST00000296215 STAB1Q9NY15 2570 aa6.91□□□□□ -1.3
SNIP1-201ENST00000296215 LAMA1P25391 3075 aa6.9□□□□□ -1.3
SNIP1-201ENST00000296215 DSPP15924 2871 aaKnown RBP6.9□□□□□ -1.31
SNIP1-201ENST00000296215 TEP1Q99973 2627 aaKnown RBP6.88□□□□□ -1.31
SNIP1-201ENST00000296215 UNC79Q9P2D8 2635 aa6.86□□□□□ -1.31
SNIP1-201ENST00000296215 KRTAP21-3Q3LHN1 58 aa6.86□□□□□ -1.31
SNIP1-201ENST00000296215 NBDYA0A0U1RRE5 68 aa6.85□□□□□ -1.31
SNIP1-201ENST00000296215 ZNF292O60281 2723 aa6.84□□□□□ -1.31
SNIP1-201ENST00000296215 AKAP13Q12802 2813 aa6.84□□□□□ -1.32
SNIP1-201ENST00000296215 A0A087WTM6 91 aa6.83□□□□□ -1.32
SNIP1-201ENST00000296215 C10orf95Q9H7T3 257 aa6.82□□□□□ -1.32
SNIP1-201ENST00000296215 Q6ZSA8 131 aa6.82□□□□□ -1.32
SNIP1-201ENST00000296215 CFAP46Q8IYW2 2715 aa6.8□□□□□ -1.32
SNIP1-201ENST00000296215 H0YAA0 97 aa6.78□□□□□ -1.32
SNIP1-201ENST00000296215 COX6B2Q6YFQ2 88 aa6.77□□□□□ -1.33
SNIP1-201ENST00000296215 TYMSOSQ8TAI1 123 aa6.77□□□□□ -1.33
SNIP1-201ENST00000296215 ZFHX4Q86UP3 3567 aa6.74□□□□□ -1.33
SNIP1-201ENST00000296215 GCN1Q92616 2671 aaKnown RBP6.74□□□□□ -1.33
SNIP1-201ENST00000296215 LRBAP50851 2863 aa6.73□□□□□ -1.33
SNIP1-201ENST00000296215 FRYQ5TBA9 3013 aa6.73□□□□□ -1.33
SNIP1-201ENST00000296215 PLAC4Q8WY50 150 aa6.72□□□□□ -1.33
SNIP1-201ENST00000296215 C9orf92A6NGG3 77 aa6.72□□□□□ -1.33
SNIP1-201ENST00000296215 KALRNO60229 2985 aa6.71□□□□□ -1.33
SNIP1-201ENST00000296215 DCHS1Q96JQ0 3298 aa6.7□□□□□ -1.34
SNIP1-201ENST00000296215 CHD6Q8TD26 2715 aa6.69□□□□□ -1.34
SNIP1-201ENST00000296215 NBEAL2Q6ZNJ1 2754 aa6.67□□□□□ -1.34
SNIP1-201ENST00000296215 COL6A5A8TX70 2615 aa6.65□□□□□ -1.34
SNIP1-201ENST00000296215 CENPEQ02224 2701 aa6.65□□□□□ -1.34
SNIP1-201ENST00000296215 NBEAL1Q6ZS30 2694 aa6.65□□□□□ -1.35
SNIP1-201ENST00000296215 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.64□□□□□ -1.35
SNIP1-201ENST00000296215 LAMA5O15230 3695 aa6.63□□□□□ -1.35
SNIP1-201ENST00000296215 KRTAP7-1Q8IUC3 87 aa6.59□□□□□ -1.35
SNIP1-201ENST00000296215 KMT2BQ9UMN6 2715 aaPredicted RBP6.57□□□□□ -1.36
SNIP1-201ENST00000296215 ASH1LQ9NR48 2969 aaKnown RBP6.56□□□□□ -1.36
SNIP1-201ENST00000296215 COL12A1Q99715 3063 aa6.56□□□□□ -1.36
SNIP1-201ENST00000296215 ZFHX3Q15911 3703 aa6.56□□□□□ -1.36
SNIP1-201ENST00000296215 CFAP47Q6ZTR5 3102 aa6.55□□□□□ -1.36
SNIP1-201ENST00000296215 S4R3F8 94 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms