RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 IGKV2-24A0A0C4DH68 120 aa6.54□□□□□ -1.36
CLDN1-201ENST00000295522 KRTAP1-3Q8IUG1 177 aa6.54□□□□□ -1.36
CLDN1-201ENST00000295522 IGFL1Q6UW32 110 aa6.53□□□□□ -1.36
CLDN1-201ENST00000295522 LOC101927531A0A1B0GV80 90 aa6.52□□□□□ -1.37
CLDN1-201ENST00000295522 SPRR4Q96PI1 79 aa6.52□□□□□ -1.37
CLDN1-201ENST00000295522 MAST4O15021 2626 aa6.52□□□□□ -1.37
CLDN1-201ENST00000295522 C7orf65Q6ZTY9 151 aa6.52□□□□□ -1.37
CLDN1-201ENST00000295522 PRAC1Q96KF2 57 aa6.51□□□□□ -1.37
CLDN1-201ENST00000295522 Q8NAQ8 132 aa6.51□□□□□ -1.37
CLDN1-201ENST00000295522 A0A1B0GW54 56 aa6.5□□□□□ -1.37
CLDN1-201ENST00000295522 NOTCH1P46531 2555 aa6.5□□□□□ -1.37
CLDN1-201ENST00000295522 KRTAP10-3P60369 221 aa6.5□□□□□ -1.37
CLDN1-201ENST00000295522 IGLV1-50A0A075B6I6 118 aa6.49□□□□□ -1.37
CLDN1-201ENST00000295522 TNP2Q05952 138 aa6.49□□□□□ -1.37
CLDN1-201ENST00000295522 C4orf48Q5BLP8 95 aa6.49□□□□□ -1.37
CLDN1-201ENST00000295522 Q75L30 129 aa6.49□□□□□ -1.37
CLDN1-201ENST00000295522 CDC42SE1Q9NRR8 79 aa6.49□□□□□ -1.37
CLDN1-201ENST00000295522 SRRM2Q9UQ35 2752 aaKnown RBP6.49□□□□□ -1.37
CLDN1-201ENST00000295522 MOBPQ13875 183 aa6.49□□□□□ -1.37
CLDN1-201ENST00000295522 TENM1Q9UKZ4 2725 aa6.49□□□□□ -1.37
CLDN1-201ENST00000295522 A6NN06 94 aa6.48□□□□□ -1.37
CLDN1-201ENST00000295522 SPINK7P58062 85 aa6.48□□□□□ -1.37
CLDN1-201ENST00000295522 REG3GQ6UW15 175 aa6.48□□□□□ -1.37
CLDN1-201ENST00000295522 INAFM1C9JVW0 142 aa6.47□□□□□ -1.37
CLDN1-201ENST00000295522 SPANXA2-OT1Q8N9U9 137 aa6.47□□□□□ -1.37
CLDN1-201ENST00000295522 NSD1Q96L73 2696 aaPredicted RBP6.45□□□□□ -1.38
CLDN1-201ENST00000295522 CASC10Q5T4H9 136 aa6.45□□□□□ -1.38
CLDN1-201ENST00000295522 CNBPP62633 177 aaKnown RBP6.44□□□□□ -1.38
CLDN1-201ENST00000295522 KRTAP26-1Q6PEX3 210 aa6.44□□□□□ -1.38
CLDN1-201ENST00000295522 PHF5AQ7RTV0 110 aaKnown RBP6.44□□□□□ -1.38
CLDN1-201ENST00000295522 KRTAP1-1Q07627 177 aa6.43□□□□□ -1.38
CLDN1-201ENST00000295522 OXLD1Q5BKU9 147 aa6.43□□□□□ -1.38
CLDN1-201ENST00000295522 MDFIQ99750 246 aa6.43□□□□□ -1.38
CLDN1-201ENST00000295522 COL6A5A8TX70 2615 aa6.43□□□□□ -1.38
CLDN1-201ENST00000295522 NBEAL1Q6ZS30 2694 aa6.43□□□□□ -1.38
CLDN1-201ENST00000295522 C8orf87E5RJ46 101 aa6.43□□□□□ -1.38
CLDN1-201ENST00000295522 STAB1Q9NY15 2570 aa6.43□□□□□ -1.38
CLDN1-201ENST00000295522 H3BPC8 53 aa6.41□□□□□ -1.38
CLDN1-201ENST00000295522 LINC00313P59037 77 aa6.41□□□□□ -1.38
CLDN1-201ENST00000295522 A8MWP4 228 aa6.41□□□□□ -1.38
CLDN1-201ENST00000295522 KRTAP4-16G5E9R7 235 aaPredicted RBP6.41□□□□□ -1.38
CLDN1-201ENST00000295522 ADM2Q7Z4H4 148 aa6.41□□□□□ -1.38
CLDN1-201ENST00000295522 PRR26Q8N8Z3 221 aa6.41□□□□□ -1.38
CLDN1-201ENST00000295522 DEFB131BA0A096LNP1 70 aa6.4□□□□□ -1.38
CLDN1-201ENST00000295522 KRTAP29-1A8MX34 341 aaPredicted RBP6.4□□□□□ -1.38
CLDN1-201ENST00000295522 H3BS24 57 aa6.4□□□□□ -1.38
CLDN1-201ENST00000295522 IGHV6-1A0A0B4J1U7 121 aa6.4□□□□□ -1.39
CLDN1-201ENST00000295522 C9orf163Q8N9P6 203 aa6.4□□□□□ -1.39
CLDN1-201ENST00000295522 TENM3Q9P273 2699 aa6.39□□□□□ -1.39
CLDN1-201ENST00000295522 IGLV7-46A0A075B6I9 117 aa6.39□□□□□ -1.39
CLDN1-201ENST00000295522 FBN1P35555 2871 aaKnown RBP6.39□□□□□ -1.39
CLDN1-201ENST00000295522 TRRAPQ9Y4A5 3859 aa6.39□□□□□ -1.39
CLDN1-201ENST00000295522 IGLV9-49A0A0B4J1Y8 123 aa6.38□□□□□ -1.39
CLDN1-201ENST00000295522 CDK2AP2O75956 126 aa6.38□□□□□ -1.39
CLDN1-201ENST00000295522 SPRR1AP35321 89 aa6.38□□□□□ -1.39
CLDN1-201ENST00000295522 KRTAP7-1Q8IUC3 87 aa6.37□□□□□ -1.39
CLDN1-201ENST00000295522 LINC01556Q5JQF7 62 aa6.36□□□□□ -1.39
CLDN1-201ENST00000295522 LINC01558Q9Y6Z2 57 aa6.36□□□□□ -1.39
CLDN1-201ENST00000295522 MGAM2Q2M2H8 2515 aa6.36□□□□□ -1.39
CLDN1-201ENST00000295522 ANK3Q12955 4377 aaKnown RBP6.35□□□□□ -1.39
CLDN1-201ENST00000295522 HRES1P13985 223 aa6.35□□□□□ -1.39
CLDN1-201ENST00000295522 MMP24-AS1A0A0U1RRL7 71 aa6.33□□□□□ -1.4
CLDN1-201ENST00000295522 CHTF8P0CG12 524 aa6.33□□□□□ -1.4
CLDN1-201ENST00000295522 SPINK6Q6UWN8 80 aa6.33□□□□□ -1.4
CLDN1-201ENST00000295522 CSMD3Q7Z407 3707 aa6.32□□□□□ -1.4
CLDN1-201ENST00000295522 TLX1NBP0CAT3 122 aa6.31□□□□□ -1.4
CLDN1-201ENST00000295522 LINC00472Q9H8W2 130 aa6.31□□□□□ -1.4
CLDN1-201ENST00000295522 COL7A1Q02388 2944 aa6.31□□□□□ -1.4
CLDN1-201ENST00000295522 PLA2G2DQ9UNK4 145 aa6.31□□□□□ -1.4
CLDN1-201ENST00000295522 IGLV5-37A0A075B6J1 123 aa6.3□□□□□ -1.4
CLDN1-201ENST00000295522 LINC01554Q52M75 96 aa6.3□□□□□ -1.4
CLDN1-201ENST00000295522 RETNLBQ9BQ08 111 aa6.3□□□□□ -1.4
CLDN1-201ENST00000295522 K7EIL1 84 aa6.28□□□□□ -1.4
CLDN1-201ENST00000295522 IGLV8-61A0A075B6I0 122 aa6.27□□□□□ -1.41
CLDN1-201ENST00000295522 TP53AIP1Q9HCN2 124 aa6.27□□□□□ -1.41
CLDN1-201ENST00000295522 C8orf17Q9NRJ1 99 aa6.27□□□□□ -1.41
CLDN1-201ENST00000295522 A0A1B0GU69 56 aa6.26□□□□□ -1.41
CLDN1-201ENST00000295522 H3BNG1 76 aa6.25□□□□□ -1.41
CLDN1-201ENST00000295522 DNAH10OSP0CZ25 163 aa6.24□□□□□ -1.41
CLDN1-201ENST00000295522 KRTAP10-11P60412 298 aa6.23□□□□□ -1.41
CLDN1-201ENST00000295522 KRTAP11-1Q8IUC1 163 aa6.23□□□□□ -1.41
CLDN1-201ENST00000295522 MRPL34Q9BQ48 92 aaKnown RBP6.22□□□□□ -1.41
CLDN1-201ENST00000295522 CSAG1Q6PB30 78 aa6.21□□□□□ -1.42
CLDN1-201ENST00000295522 ANAPC11Q9NYG5 84 aa6.21□□□□□ -1.42
CLDN1-201ENST00000295522 ACYP2P14621 99 aa6.2□□□□□ -1.42
CLDN1-201ENST00000295522 A0A087X002 238 aa6.2□□□□□ -1.42
CLDN1-201ENST00000295522 NOTCH2NLQ7Z3S9 236 aa6.2□□□□□ -1.42
CLDN1-201ENST00000295522 PLAC8Q9NZF1 115 aa6.19□□□□□ -1.42
CLDN1-201ENST00000295522 A0A1B0GVX0 72 aa6.19□□□□□ -1.42
CLDN1-201ENST00000295522 MIR22HGQ0VDD5 57 aa6.19□□□□□ -1.42
CLDN1-201ENST00000295522 UBE2DNLQ8IWF7 75 aa6.19□□□□□ -1.42
CLDN1-201ENST00000295522 TENM2Q9NT68 2774 aa6.16□□□□□ -1.42
CLDN1-201ENST00000295522 STAB2Q8WWQ8 2551 aa6.16□□□□□ -1.42
CLDN1-201ENST00000295522 SPINK1P00995 79 aa6.16□□□□□ -1.42
CLDN1-201ENST00000295522 Q6ZR54 194 aa6.16□□□□□ -1.42
CLDN1-201ENST00000295522 FLG2Q5D862 2391 aaPredicted RBP6.16□□□□□ -1.42
CLDN1-201ENST00000295522 Q5W150 140 aa6.15□□□□□ -1.43
CLDN1-201ENST00000295522 PLA2G1BP04054 148 aaKnown RBP6.15□□□□□ -1.43
CLDN1-201ENST00000295522 UQCR11O14957 56 aa6.14□□□□□ -1.43
CLDN1-201ENST00000295522 Q96NJ1 140 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms