RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 PLA2G2DQ9UNK4 145 aa9.36□□□□□ -0.91
CCNF-201ENST00000293968 IGLV5-37A0A075B6J1 123 aa9.32□□□□□ -0.92
CCNF-201ENST00000293968 H0Y9J4 135 aa9.32□□□□□ -0.92
CCNF-201ENST00000293968 CASC2Q6XLA1 102 aa9.3□□□□□ -0.92
CCNF-201ENST00000293968 CHTF8P0CG12 524 aa9.3□□□□□ -0.92
CCNF-201ENST00000293968 NBEAL1Q6ZS30 2694 aa9.3□□□□□ -0.92
CCNF-201ENST00000293968 UBE2DNLQ8IWF7 75 aa9.3□□□□□ -0.92
CCNF-201ENST00000293968 FBN1P35555 2871 aaKnown RBP9.29□□□□□ -0.92
CCNF-201ENST00000293968 H0Y9P7 68 aa9.29□□□□□ -0.92
CCNF-201ENST00000293968 NDUFB1O75438 58 aa9.29□□□□□ -0.92
CCNF-201ENST00000293968 TRAV22A0A0B4J277 110 aa9.28□□□□□ -0.92
CCNF-201ENST00000293968 PHF5AQ7RTV0 110 aaKnown RBP9.28□□□□□ -0.92
CCNF-201ENST00000293968 V9GYY9 64 aa9.28□□□□□ -0.92
CCNF-201ENST00000293968 ZCCHC13Q8WW36 166 aaKnown RBP9.27□□□□□ -0.93
CCNF-201ENST00000293968 A8MUN3 132 aa9.27□□□□□ -0.93
CCNF-201ENST00000293968 B9D2Q9BPU9 175 aa9.26□□□□□ -0.93
CCNF-201ENST00000293968 LCE6AA0A183 80 aa9.25□□□□□ -0.93
CCNF-201ENST00000293968 KRTAP24-1Q3LI83 254 aa9.24□□□□□ -0.93
CCNF-201ENST00000293968 C16orf90A8MZG2 172 aa9.22□□□□□ -0.93
CCNF-201ENST00000293968 Q1T7F1 81 aa9.22□□□□□ -0.93
CCNF-201ENST00000293968 KMT2BQ9UMN6 2715 aaPredicted RBP9.21□□□□□ -0.93
CCNF-201ENST00000293968 SRRM2Q9UQ35 2752 aaKnown RBP9.21□□□□□ -0.94
CCNF-201ENST00000293968 CHKB-CPT1BH3BT56 60 aa9.2□□□□□ -0.94
CCNF-201ENST00000293968 PCOTHQ58A44 107 aa9.2□□□□□ -0.94
CCNF-201ENST00000293968 MGAM2Q2M2H8 2515 aa9.2□□□□□ -0.94
CCNF-201ENST00000293968 IGLV9-49A0A0B4J1Y8 123 aa9.2□□□□□ -0.94
CCNF-201ENST00000293968 NDUFS5O43920 106 aa9.2□□□□□ -0.94
CCNF-201ENST00000293968 PRR15LQ9BU68 103 aa9.19□□□□□ -0.94
CCNF-201ENST00000293968 PRR15Q8IV56 129 aa9.19□□□□□ -0.94
CCNF-201ENST00000293968 CYP4F30PQ9H0H9 118 aa9.18□□□□□ -0.94
CCNF-201ENST00000293968 KRTAP1-5Q9BYS1 174 aa9.18□□□□□ -0.94
CCNF-201ENST00000293968 CNBPP62633 177 aaKnown RBP9.17□□□□□ -0.94
CCNF-201ENST00000293968 KRTAP11-1Q8IUC1 163 aa9.17□□□□□ -0.94
CCNF-201ENST00000293968 SPTSSBQ8NFR3 76 aa9.17□□□□□ -0.94
CCNF-201ENST00000293968 A8MWP4 228 aa9.16□□□□□ -0.94
CCNF-201ENST00000293968 A8MU10 97 aa9.13□□□□□ -0.95
CCNF-201ENST00000293968 PMAIP1Q13794 54 aa9.13□□□□□ -0.95
CCNF-201ENST00000293968 STAB2Q8WWQ8 2551 aa9.13□□□□□ -0.95
CCNF-201ENST00000293968 KRTAP29-1A8MX34 341 aaPredicted RBP9.12□□□□□ -0.95
CCNF-201ENST00000293968 IGLV8-61A0A075B6I0 122 aa9.1□□□□□ -0.95
CCNF-201ENST00000293968 SEC61GP60059 68 aa9.1□□□□□ -0.95
CCNF-201ENST00000293968 CSMD3Q7Z407 3707 aa9.09□□□□□ -0.95
CCNF-201ENST00000293968 A6NED7 52 aa9.09□□□□□ -0.95
CCNF-201ENST00000293968 CDK2AP2O75956 126 aa9.09□□□□□ -0.95
CCNF-201ENST00000293968 IGHV6-1A0A0B4J1U7 121 aa9.09□□□□□ -0.95
CCNF-201ENST00000293968 K7EIL1 84 aa9.09□□□□□ -0.95
CCNF-201ENST00000293968 LINC00472Q9H8W2 130 aa9.09□□□□□ -0.96
CCNF-201ENST00000293968 C14orf177Q52M58 125 aa9.08□□□□□ -0.96
CCNF-201ENST00000293968 ANK2Q01484 3957 aa9.08□□□□□ -0.96
CCNF-201ENST00000293968 Q5VV11 94 aa9.07□□□□□ -0.96
CCNF-201ENST00000293968 COA5Q86WW8 74 aa9.07□□□□□ -0.96
CCNF-201ENST00000293968 H3BPC8 53 aa9.06□□□□□ -0.96
CCNF-201ENST00000293968 Q8N9P0 234 aaPredicted RBP9.05□□□□□ -0.96
CCNF-201ENST00000293968 LIMD2Q9BT23 127 aa9.05□□□□□ -0.96
CCNF-201ENST00000293968 SPANXA2-OT1Q8N9U9 137 aa9.05□□□□□ -0.96
CCNF-201ENST00000293968 MMP24-AS1A0A0U1RRL7 71 aa9.04□□□□□ -0.96
CCNF-201ENST00000293968 SPAG11AQ6PDA7 123 aa9.04□□□□□ -0.96
CCNF-201ENST00000293968 TENM2Q9NT68 2774 aa9.03□□□□□ -0.96
CCNF-201ENST00000293968 PANO1I0J062 215 aa9.02□□□□□ -0.97
CCNF-201ENST00000293968 SPINK6Q6UWN8 80 aa9.02□□□□□ -0.97
CCNF-201ENST00000293968 ANAPC11Q9NYG5 84 aa9.02□□□□□ -0.97
CCNF-201ENST00000293968 C9orf163Q8N9P6 203 aa8.99□□□□□ -0.97
CCNF-201ENST00000293968 SPRR1BP22528 89 aa8.99□□□□□ -0.97
CCNF-201ENST00000293968 MOBPQ13875 183 aa8.98□□□□□ -0.97
CCNF-201ENST00000293968 C8orf17Q9NRJ1 99 aa8.97□□□□□ -0.97
CCNF-201ENST00000293968 CD164Q04900 197 aa8.97□□□□□ -0.97
CCNF-201ENST00000293968 COL7A1Q02388 2944 aa8.96□□□□□ -0.97
CCNF-201ENST00000293968 IGLV7-46A0A075B6I9 117 aa8.94□□□□□ -0.98
CCNF-201ENST00000293968 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.94□□□□□ -0.98
CCNF-201ENST00000293968 DNAH10Q8IVF4 4471 aa8.93□□□□□ -0.98
CCNF-201ENST00000293968 TP53AIP1Q9HCN2 124 aa8.93□□□□□ -0.98
CCNF-201ENST00000293968 APLNQ9ULZ1 77 aa8.93□□□□□ -0.98
CCNF-201ENST00000293968 NBDYA0A0U1RRE5 68 aa8.91□□□□□ -0.98
CCNF-201ENST00000293968 MDFIQ99750 246 aa8.91□□□□□ -0.98
CCNF-201ENST00000293968 A0A1B0GVX0 72 aa8.9□□□□□ -0.98
CCNF-201ENST00000293968 LCA10Q71F78 164 aa8.89□□□□□ -0.99
CCNF-201ENST00000293968 LOC101927531A0A1B0GV80 90 aa8.88□□□□□ -0.99
CCNF-201ENST00000293968 MRPL34Q9BQ48 92 aaKnown RBP8.88□□□□□ -0.99
CCNF-201ENST00000293968 A0A087X002 238 aa8.87□□□□□ -0.99
CCNF-201ENST00000293968 NOTCH2NLQ7Z3S9 236 aa8.87□□□□□ -0.99
CCNF-201ENST00000293968 Q96NJ1 140 aa8.87□□□□□ -0.99
CCNF-201ENST00000293968 RETNLBQ9BQ08 111 aa8.87□□□□□ -0.99
CCNF-201ENST00000293968 Q75L30 129 aa8.87□□□□□ -0.99
CCNF-201ENST00000293968 CIRBP-AS1Q8TBR5 109 aa8.87□□□□□ -0.99
CCNF-201ENST00000293968 ZNF706Q9Y5V0 76 aaPredicted RBP8.86□□□□□ -0.99
CCNF-201ENST00000293968 PSORS1C2Q9UIG4 136 aa8.84□□□□□ -0.99
CCNF-201ENST00000293968 LYSTQ99698 3801 aa8.84□□□□□ -0.99
CCNF-201ENST00000293968 HRES1P13985 223 aa8.84□□□□□ -0.99
CCNF-201ENST00000293968 KRTAP13-1Q8IUC0 172 aa8.83□□□□□ -1
CCNF-201ENST00000293968 PRR26Q8N8Z3 221 aa8.83□□□□□ -1
CCNF-201ENST00000293968 HUWE1Q7Z6Z7 4374 aaKnown RBP8.83□□□□□ -1
CCNF-201ENST00000293968 ATP11AUNQ6ZP68 121 aa8.83□□□□□ -1
CCNF-201ENST00000293968 SPACA4Q8TDM5 124 aa8.81□□□□□ -1
CCNF-201ENST00000293968 SPINK7P58062 85 aa8.8□□□□□ -1
CCNF-201ENST00000293968 KTN1-AS1Q86SY8 53 aa8.8□□□□□ -1
CCNF-201ENST00000293968 WWC2-AS2Q96NR7 200 aa8.79□□□□□ -1
CCNF-201ENST00000293968 DNAH1Q9P2D7 4330 aa8.79□□□□□ -1
CCNF-201ENST00000293968 RTL8CO15255 209 aa8.79□□□□□ -1
CCNF-201ENST00000293968 Q6ZR54 194 aa8.79□□□□□ -1
CCNF-201ENST00000293968 CDC42SE1Q9NRR8 79 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms