RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 TRAV22A0A0B4J277 110 aa12.72□□□□□ -0.37
TMED4-201ENST00000289577 IGKV2-24A0A0C4DH68 120 aa12.71□□□□□ -0.37
TMED4-201ENST00000289577 KRTAP24-1Q3LI83 254 aa12.71□□□□□ -0.37
TMED4-201ENST00000289577 FLNBO75369 2602 aaKnown RBP12.7□□□□□ -0.38
TMED4-201ENST00000289577 UBE2AP49459 152 aa12.7□□□□□ -0.38
TMED4-201ENST00000289577 RPL37AP61513 92 aaKnown RBP12.7□□□□□ -0.38
TMED4-201ENST00000289577 PRR4Q16378 134 aa12.7□□□□□ -0.38
TMED4-201ENST00000289577 SPRR1BP22528 89 aa12.69□□□□□ -0.38
TMED4-201ENST00000289577 F8P00451 2351 aa12.69□□□□□ -0.38
TMED4-201ENST00000289577 HUWE1Q7Z6Z7 4374 aaKnown RBP12.67□□□□□ -0.38
TMED4-201ENST00000289577 PRR15Q8IV56 129 aa12.66□□□□□ -0.38
TMED4-201ENST00000289577 LINC00208Q96KT6 92 aa12.66□□□□□ -0.38
TMED4-201ENST00000289577 KRTAP1-5Q9BYS1 174 aa12.66□□□□□ -0.38
TMED4-201ENST00000289577 H0Y9J4 135 aa12.65□□□□□ -0.38
TMED4-201ENST00000289577 KRTAP11-1Q8IUC1 163 aa12.65□□□□□ -0.38
TMED4-201ENST00000289577 H3BPC8 53 aa12.64□□□□□ -0.39
TMED4-201ENST00000289577 CASC2Q6XLA1 102 aa12.64□□□□□ -0.39
TMED4-201ENST00000289577 LINC00472Q9H8W2 130 aa12.64□□□□□ -0.39
TMED4-201ENST00000289577 DNAH10Q8IVF4 4471 aa12.64□□□□□ -0.39
TMED4-201ENST00000289577 C1orf195Q5TG92 126 aa12.64□□□□□ -0.39
TMED4-201ENST00000289577 SPANXA2-OT1Q8N9U9 137 aa12.63□□□□□ -0.39
TMED4-201ENST00000289577 A8MWP4 228 aa12.62□□□□□ -0.39
TMED4-201ENST00000289577 B9D2Q9BPU9 175 aa12.62□□□□□ -0.39
TMED4-201ENST00000289577 H0Y9P7 68 aa12.61□□□□□ -0.39
TMED4-201ENST00000289577 BAHCC1Q9P281 2608 aa12.61□□□□□ -0.39
TMED4-201ENST00000289577 MAST4O15021 2626 aa12.61□□□□□ -0.39
TMED4-201ENST00000289577 PHF5AQ7RTV0 110 aaKnown RBP12.6□□□□□ -0.39
TMED4-201ENST00000289577 PRB2P02812 416 aaPredicted RBP12.6□□□□□ -0.39
TMED4-201ENST00000289577 PSPHP1O15172 72 aa12.59□□□□□ -0.39
TMED4-201ENST00000289577 V9GYY9 64 aa12.57□□□□□ -0.4
TMED4-201ENST00000289577 STAB1Q9NY15 2570 aa12.57□□□□□ -0.4
TMED4-201ENST00000289577 CHTF8P0CG12 524 aa12.56□□□□□ -0.4
TMED4-201ENST00000289577 FBN1P35555 2871 aaKnown RBP12.54□□□□□ -0.4
TMED4-201ENST00000289577 DNAH9Q9NYC9 4486 aa12.54□□□□□ -0.4
TMED4-201ENST00000289577 K7EIL1 84 aa12.53□□□□□ -0.4
TMED4-201ENST00000289577 C9orf163Q8N9P6 203 aa12.53□□□□□ -0.4
TMED4-201ENST00000289577 C14orf177Q52M58 125 aa12.53□□□□□ -0.4
TMED4-201ENST00000289577 NOTCH1P46531 2555 aa12.52□□□□□ -0.4
TMED4-201ENST00000289577 A8MUN3 132 aa12.5□□□□□ -0.41
TMED4-201ENST00000289577 MMP24-AS1A0A0U1RRL7 71 aa12.5□□□□□ -0.41
TMED4-201ENST00000289577 KRTAP13-1Q8IUC0 172 aa12.47□□□□□ -0.41
TMED4-201ENST00000289577 LYSTQ99698 3801 aa12.46□□□□□ -0.41
TMED4-201ENST00000289577 Q5VV11 94 aa12.46□□□□□ -0.42
TMED4-201ENST00000289577 Q8N9P0 234 aaPredicted RBP12.45□□□□□ -0.42
TMED4-201ENST00000289577 SRRM2Q9UQ35 2752 aaKnown RBP12.45□□□□□ -0.42
TMED4-201ENST00000289577 ASB16-AS1Q495Z4 193 aa12.42□□□□□ -0.42
TMED4-201ENST00000289577 UBE2DNLQ8IWF7 75 aa12.42□□□□□ -0.42
TMED4-201ENST00000289577 LIMD2Q9BT23 127 aa12.42□□□□□ -0.42
TMED4-201ENST00000289577 APLNQ9ULZ1 77 aa12.42□□□□□ -0.42
TMED4-201ENST00000289577 Q96NJ1 140 aa12.41□□□□□ -0.42
TMED4-201ENST00000289577 NBEAL1Q6ZS30 2694 aa12.41□□□□□ -0.42
TMED4-201ENST00000289577 IGLV7-46A0A075B6I9 117 aa12.4□□□□□ -0.42
TMED4-201ENST00000289577 PANO1I0J062 215 aa12.37□□□□□ -0.43
TMED4-201ENST00000289577 DYNC2H1Q8NCM8 4307 aaKnown RBP12.37□□□□□ -0.43
TMED4-201ENST00000289577 TP53AIP1Q9HCN2 124 aa12.36□□□□□ -0.43
TMED4-201ENST00000289577 MOBPQ13875 183 aa12.35□□□□□ -0.43
TMED4-201ENST00000289577 COA5Q86WW8 74 aa12.34□□□□□ -0.43
TMED4-201ENST00000289577 PMAIP1Q13794 54 aa12.34□□□□□ -0.43
TMED4-201ENST00000289577 COL6A5A8TX70 2615 aa12.33□□□□□ -0.44
TMED4-201ENST00000289577 Q6ZR54 194 aa12.31□□□□□ -0.44
TMED4-201ENST00000289577 PRR15LQ9BU68 103 aa12.31□□□□□ -0.44
TMED4-201ENST00000289577 A8MU10 97 aa12.31□□□□□ -0.44
TMED4-201ENST00000289577 CHKB-CPT1BH3BT56 60 aa12.31□□□□□ -0.44
TMED4-201ENST00000289577 LINC00483Q53H64 154 aa12.31□□□□□ -0.44
TMED4-201ENST00000289577 C8orf17Q9NRJ1 99 aa12.31□□□□□ -0.44
TMED4-201ENST00000289577 IGLV9-49A0A0B4J1Y8 123 aa12.3□□□□□ -0.44
TMED4-201ENST00000289577 CD164Q04900 197 aa12.29□□□□□ -0.44
TMED4-201ENST00000289577 LOC101927531A0A1B0GV80 90 aa12.29□□□□□ -0.44
TMED4-201ENST00000289577 TENM2Q9NT68 2774 aa12.28□□□□□ -0.44
TMED4-201ENST00000289577 Q6ZRN7 208 aaPredicted RBP12.28□□□□□ -0.44
TMED4-201ENST00000289577 Q75L30 129 aa12.27□□□□□ -0.45
TMED4-201ENST00000289577 NBDYA0A0U1RRE5 68 aa12.26□□□□□ -0.45
TMED4-201ENST00000289577 PCOTHQ58A44 107 aa12.26□□□□□ -0.45
TMED4-201ENST00000289577 SPACA4Q8TDM5 124 aa12.26□□□□□ -0.45
TMED4-201ENST00000289577 DNAH7Q8WXX0 4024 aa12.25□□□□□ -0.45
TMED4-201ENST00000289577 STAB2Q8WWQ8 2551 aa12.25□□□□□ -0.45
TMED4-201ENST00000289577 A0A1B0GVX0 72 aa12.25□□□□□ -0.45
TMED4-201ENST00000289577 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.25□□□□□ -0.45
TMED4-201ENST00000289577 CSMD3Q7Z407 3707 aa12.24□□□□□ -0.45
TMED4-201ENST00000289577 SEC61GP60059 68 aa12.22□□□□□ -0.45
TMED4-201ENST00000289577 COL7A1Q02388 2944 aa12.21□□□□□ -0.46
TMED4-201ENST00000289577 WWC2-AS2Q96NR7 200 aa12.21□□□□□ -0.46
TMED4-201ENST00000289577 IGHV6-1A0A0B4J1U7 121 aa12.2□□□□□ -0.46
TMED4-201ENST00000289577 ZNF706Q9Y5V0 76 aaPredicted RBP12.19□□□□□ -0.46
TMED4-201ENST00000289577 PLECQ15149 4684 aaKnown RBP12.19□□□□□ -0.46
TMED4-201ENST00000289577 LCA10Q71F78 164 aa12.18□□□□□ -0.46
TMED4-201ENST00000289577 MRPL34Q9BQ48 92 aaKnown RBP12.18□□□□□ -0.46
TMED4-201ENST00000289577 PLAC8Q9NZF1 115 aa12.18□□□□□ -0.46
TMED4-201ENST00000289577 NDUFS5O43920 106 aa12.17□□□□□ -0.46
TMED4-201ENST00000289577 LINC01558Q9Y6Z2 57 aa12.16□□□□□ -0.46
TMED4-201ENST00000289577 CDK2AP2O75956 126 aa12.15□□□□□ -0.46
TMED4-201ENST00000289577 MDFIQ99750 246 aa12.14□□□□□ -0.47
TMED4-201ENST00000289577 A6NED7 52 aa12.13□□□□□ -0.47
TMED4-201ENST00000289577 A0A087X002 238 aa12.12□□□□□ -0.47
TMED4-201ENST00000289577 NOTCH2NLQ7Z3S9 236 aa12.12□□□□□ -0.47
TMED4-201ENST00000289577 HRES1P13985 223 aa12.11□□□□□ -0.47
TMED4-201ENST00000289577 ATP11AUNQ6ZP68 121 aa12.11□□□□□ -0.47
TMED4-201ENST00000289577 PSORS1C2Q9UIG4 136 aa12.11□□□□□ -0.47
TMED4-201ENST00000289577 IGLV5-52A0A0A0MRZ9 124 aa12.11□□□□□ -0.47
TMED4-201ENST00000289577 MGAM2Q2M2H8 2515 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms