RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 LINC00483Q53H64 154 aa8.6□□□□□ -1.03
NOTCH1-201ENST00000277541 LAMA2P24043 3122 aaKnown RBP8.6□□□□□ -1.03
NOTCH1-201ENST00000277541 DMAC1Q96GE9 116 aa8.58□□□□□ -1.04
NOTCH1-201ENST00000277541 DMBT1Q9UGM3 2413 aaPredicted RBP8.58□□□□□ -1.04
NOTCH1-201ENST00000277541 ITPR1Q14643 2758 aa8.58□□□□□ -1.04
NOTCH1-201ENST00000277541 CASC10Q5T4H9 136 aa8.57□□□□□ -1.04
NOTCH1-201ENST00000277541 TRANK1O15050 2925 aa8.56□□□□□ -1.04
NOTCH1-201ENST00000277541 UTP20O75691 2785 aaKnown RBP8.56□□□□□ -1.04
NOTCH1-201ENST00000277541 ITPR2Q14571 2701 aa8.55□□□□□ -1.04
NOTCH1-201ENST00000277541 CSAG1Q6PB30 78 aa8.54□□□□□ -1.04
NOTCH1-201ENST00000277541 PRAC1Q96KF2 57 aa8.53□□□□□ -1.04
NOTCH1-201ENST00000277541 MMP24-AS1A0A0U1RRL7 71 aa8.53□□□□□ -1.04
NOTCH1-201ENST00000277541 KRTAP10-3P60369 221 aa8.52□□□□□ -1.05
NOTCH1-201ENST00000277541 APCP25054 2843 aa8.51□□□□□ -1.05
NOTCH1-201ENST00000277541 TEP1Q99973 2627 aaKnown RBP8.5□□□□□ -1.05
NOTCH1-201ENST00000277541 A0A0A0MQY5 61 aa8.49□□□□□ -1.05
NOTCH1-201ENST00000277541 CHD7Q9P2D1 2997 aa8.49□□□□□ -1.05
NOTCH1-201ENST00000277541 SMR3BP02814 79 aaPredicted RBP8.48□□□□□ -1.05
NOTCH1-201ENST00000277541 ZNF292O60281 2723 aa8.48□□□□□ -1.05
NOTCH1-201ENST00000277541 SPINK7P58062 85 aa8.47□□□□□ -1.05
NOTCH1-201ENST00000277541 DSPP15924 2871 aaKnown RBP8.46□□□□□ -1.05
NOTCH1-201ENST00000277541 OXTP01178 125 aa8.45□□□□□ -1.06
NOTCH1-201ENST00000277541 ASB16-AS1Q495Z4 193 aa8.44□□□□□ -1.06
NOTCH1-201ENST00000277541 NBEAL2Q6ZNJ1 2754 aa8.44□□□□□ -1.06
NOTCH1-201ENST00000277541 CAMK2N1Q7Z7J9 78 aa8.44□□□□□ -1.06
NOTCH1-201ENST00000277541 SPRR1AP35321 89 aa8.43□□□□□ -1.06
NOTCH1-201ENST00000277541 ZCCHC13Q8WW36 166 aaKnown RBP8.43□□□□□ -1.06
NOTCH1-201ENST00000277541 LINC00472Q9H8W2 130 aa8.43□□□□□ -1.06
NOTCH1-201ENST00000277541 Q5W150 140 aa8.41□□□□□ -1.06
NOTCH1-201ENST00000277541 SETXQ7Z333 2677 aaKnown RBP8.41□□□□□ -1.06
NOTCH1-201ENST00000277541 Q6ZSA8 131 aa8.41□□□□□ -1.06
NOTCH1-201ENST00000277541 MGAQ8IWI9 3026 aa8.4□□□□□ -1.06
NOTCH1-201ENST00000277541 S4R3F8 94 aa8.4□□□□□ -1.06
NOTCH1-201ENST00000277541 Q8NDZ9 215 aa8.4□□□□□ -1.07
NOTCH1-201ENST00000277541 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.36□□□□□ -1.07
NOTCH1-201ENST00000277541 ROMO1P60602 79 aa8.36□□□□□ -1.07
NOTCH1-201ENST00000277541 LRBAP50851 2863 aa8.34□□□□□ -1.07
NOTCH1-201ENST00000277541 KRTAP1-3Q8IUG1 177 aa8.34□□□□□ -1.07
NOTCH1-201ENST00000277541 FRYQ5TBA9 3013 aa8.33□□□□□ -1.08
NOTCH1-201ENST00000277541 SPRR1BP22528 89 aa8.33□□□□□ -1.08
NOTCH1-201ENST00000277541 NSD1Q96L73 2696 aaPredicted RBP8.31□□□□□ -1.08
NOTCH1-201ENST00000277541 VPS13AQ96RL7 3174 aa8.31□□□□□ -1.08
NOTCH1-201ENST00000277541 PLAC8Q9NZF1 115 aa8.3□□□□□ -1.08
NOTCH1-201ENST00000277541 Q6ZR54 194 aa8.29□□□□□ -1.08
NOTCH1-201ENST00000277541 RPL37P61927 97 aaKnown RBP8.28□□□□□ -1.08
NOTCH1-201ENST00000277541 KRTAP1-1Q07627 177 aa8.27□□□□□ -1.08
NOTCH1-201ENST00000277541 TNP2Q05952 138 aa8.27□□□□□ -1.09
NOTCH1-201ENST00000277541 MKI67P46013 3256 aaKnown RBP8.27□□□□□ -1.09
NOTCH1-201ENST00000277541 CHD9Q3L8U1 2897 aa8.26□□□□□ -1.09
NOTCH1-201ENST00000277541 KRTAP26-1Q6PEX3 210 aa8.25□□□□□ -1.09
NOTCH1-201ENST00000277541 H1FX-AS1Q4G0G2 97 aa8.24□□□□□ -1.09
NOTCH1-201ENST00000277541 R4GN34 69 aa8.22□□□□□ -1.09
NOTCH1-201ENST00000277541 TRIOO75962 3097 aa8.22□□□□□ -1.09
NOTCH1-201ENST00000277541 TACC2O95359 2948 aa8.2□□□□□ -1.1
NOTCH1-201ENST00000277541 KALRNO60229 2985 aa8.19□□□□□ -1.1
NOTCH1-201ENST00000277541 XIRP2A4UGR9 3374 aa8.19□□□□□ -1.1
NOTCH1-201ENST00000277541 M0R2T5 61 aa8.19□□□□□ -1.1
NOTCH1-201ENST00000277541 UBR5O95071 2799 aaPredicted RBP8.18□□□□□ -1.1
NOTCH1-201ENST00000277541 NBEAQ8NFP9 2946 aa8.18□□□□□ -1.1
NOTCH1-201ENST00000277541 SPATA8Q6RVD6 105 aa8.15□□□□□ -1.11
NOTCH1-201ENST00000277541 RANBP2P49792 3224 aaKnown RBP8.14□□□□□ -1.11
NOTCH1-201ENST00000277541 A6NN06 94 aa8.14□□□□□ -1.11
NOTCH1-201ENST00000277541 KRTAP29-1A8MX34 341 aaPredicted RBP8.13□□□□□ -1.11
NOTCH1-201ENST00000277541 WDFY4Q6ZS81 3184 aa8.12□□□□□ -1.11
NOTCH1-201ENST00000277541 KRTAP16-1A8MUX0 517 aa8.12□□□□□ -1.11
NOTCH1-201ENST00000277541 FLNCQ14315 2725 aa8.12□□□□□ -1.11
NOTCH1-201ENST00000277541 FRYLO94915 3013 aa8.11□□□□□ -1.11
NOTCH1-201ENST00000277541 KRTAP4-16G5E9R7 235 aaPredicted RBP8.11□□□□□ -1.11
NOTCH1-201ENST00000277541 PRUNE2Q8WUY3 3088 aa8.09□□□□□ -1.11
NOTCH1-201ENST00000277541 IGSF10Q6WRI0 2623 aa8.08□□□□□ -1.12
NOTCH1-201ENST00000277541 FREM2Q5SZK8 3169 aa8.07□□□□□ -1.12
NOTCH1-201ENST00000277541 LAMA3Q16787 3333 aa8.07□□□□□ -1.12
NOTCH1-201ENST00000277541 SEC61BP60468 96 aaKnown RBP8.06□□□□□ -1.12
NOTCH1-201ENST00000277541 M0QZ58 72 aa8.05□□□□□ -1.12
NOTCH1-201ENST00000277541 KRTAP25-1Q3LHN0 102 aa8.05□□□□□ -1.12
NOTCH1-201ENST00000277541 HTTP42858 3142 aa8.04□□□□□ -1.12
NOTCH1-201ENST00000277541 LCE6AA0A183 80 aa8.04□□□□□ -1.12
NOTCH1-201ENST00000277541 DNAH14Q0VDD8 3507 aa8.03□□□□□ -1.12
NOTCH1-201ENST00000277541 CELSR3Q9NYQ7 3312 aa8.03□□□□□ -1.12
NOTCH1-201ENST00000277541 BRCA2P51587 3418 aa8.02□□□□□ -1.13
NOTCH1-201ENST00000277541 PANO1I0J062 215 aa8.02□□□□□ -1.13
NOTCH1-201ENST00000277541 KRTAP1-5Q9BYS1 174 aa8.02□□□□□ -1.13
NOTCH1-201ENST00000277541 ASH1LQ9NR48 2969 aaKnown RBP8□□□□□ -1.13
NOTCH1-201ENST00000277541 ADM2Q7Z4H4 148 aa7.99□□□□□ -1.13
NOTCH1-201ENST00000277541 A0A087X002 238 aa7.93□□□□□ -1.14
NOTCH1-201ENST00000277541 LAMA1P25391 3075 aa7.93□□□□□ -1.14
NOTCH1-201ENST00000277541 Q5VSD8 79 aa7.9□□□□□ -1.14
NOTCH1-201ENST00000277541 HIVEP1P15822 2718 aa7.9□□□□□ -1.14
NOTCH1-201ENST00000277541 REV3LO60673 3130 aa7.88□□□□□ -1.15
NOTCH1-201ENST00000277541 CDH23Q9H251 3354 aa7.86□□□□□ -1.15
NOTCH1-201ENST00000277541 PLAC4Q8WY50 150 aa7.86□□□□□ -1.15
NOTCH1-201ENST00000277541 NIPBLQ6KC79 2804 aaeCLIP7.85□□□□□ -1.15
NOTCH1-201ENST00000277541 NOTCH2NLQ7Z3S9 236 aa7.84□□□□□ -1.15
NOTCH1-201ENST00000277541 NDUFAF8A1L188 74 aa7.84□□□□□ -1.15
NOTCH1-201ENST00000277541 UNC80Q8N2C7 3258 aa7.84□□□□□ -1.15
NOTCH1-201ENST00000277541 KRTAP10-1P60331 282 aa7.84□□□□□ -1.15
NOTCH1-201ENST00000277541 RPS29P62273 56 aaKnown RBP7.83□□□□□ -1.16
NOTCH1-201ENST00000277541 DMXL2Q8TDJ6 3036 aa7.83□□□□□ -1.16
NOTCH1-201ENST00000277541 NF1P21359 2839 aa7.83□□□□□ -1.16
NOTCH1-201ENST00000277541 USP34Q70CQ2 3546 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms