RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 V9GYY9 64 aa8.21□□□□□ -1.1
COL8A1-202ENST00000273342 TRAV22A0A0B4J277 110 aa8.21□□□□□ -1.1
COL8A1-202ENST00000273342 A8MUN3 132 aa8.21□□□□□ -1.1
COL8A1-202ENST00000273342 ZCCHC13Q8WW36 166 aaKnown RBP8.21□□□□□ -1.1
COL8A1-202ENST00000273342 H3BNG1 76 aa8.19□□□□□ -1.1
COL8A1-202ENST00000273342 REG3GQ6UW15 175 aa8.19□□□□□ -1.1
COL8A1-202ENST00000273342 SPRR1AP35321 89 aa8.19□□□□□ -1.1
COL8A1-202ENST00000273342 LCE6AA0A183 80 aa8.18□□□□□ -1.1
COL8A1-202ENST00000273342 LINC00588Q9Y4M8 146 aa8.17□□□□□ -1.1
COL8A1-202ENST00000273342 MP68P56378 58 aa8.16□□□□□ -1.1
COL8A1-202ENST00000273342 F8WDY8 70 aa8.16□□□□□ -1.1
COL8A1-202ENST00000273342 DNAH10OSP0CZ25 163 aa8.15□□□□□ -1.11
COL8A1-202ENST00000273342 Q1T7F1 81 aa8.15□□□□□ -1.11
COL8A1-202ENST00000273342 KRTAP24-1Q3LI83 254 aa8.15□□□□□ -1.11
COL8A1-202ENST00000273342 TLX1NBP0CAT3 122 aa8.14□□□□□ -1.11
COL8A1-202ENST00000273342 A0A1B0GW54 56 aa8.13□□□□□ -1.11
COL8A1-202ENST00000273342 SEC61GP60059 68 aa8.13□□□□□ -1.11
COL8A1-202ENST00000273342 UBE2AP49459 152 aa8.12□□□□□ -1.11
COL8A1-202ENST00000273342 PLA2G2DQ9UNK4 145 aa8.12□□□□□ -1.11
COL8A1-202ENST00000273342 H0Y9P7 68 aa8.12□□□□□ -1.11
COL8A1-202ENST00000273342 B9D2Q9BPU9 175 aa8.12□□□□□ -1.11
COL8A1-202ENST00000273342 CASC2Q6XLA1 102 aa8.11□□□□□ -1.11
COL8A1-202ENST00000273342 CHTF8P0CG12 524 aa8.11□□□□□ -1.11
COL8A1-202ENST00000273342 DNAH10Q8IVF4 4471 aa8.1□□□□□ -1.11
COL8A1-202ENST00000273342 IGLV5-37A0A075B6J1 123 aa8.1□□□□□ -1.11
COL8A1-202ENST00000273342 LYSTQ99698 3801 aa8.1□□□□□ -1.11
COL8A1-202ENST00000273342 H0Y9J4 135 aa8.09□□□□□ -1.11
COL8A1-202ENST00000273342 PMAIP1Q13794 54 aa8.09□□□□□ -1.11
COL8A1-202ENST00000273342 CHKB-CPT1BH3BT56 60 aa8.08□□□□□ -1.12
COL8A1-202ENST00000273342 PRR15Q8IV56 129 aa8.08□□□□□ -1.12
COL8A1-202ENST00000273342 KRTAP11-1Q8IUC1 163 aa8.08□□□□□ -1.12
COL8A1-202ENST00000273342 CYP4F30PQ9H0H9 118 aa8.08□□□□□ -1.12
COL8A1-202ENST00000273342 NDUFB1O75438 58 aa8.08□□□□□ -1.12
COL8A1-202ENST00000273342 PHF5AQ7RTV0 110 aaKnown RBP8.07□□□□□ -1.12
COL8A1-202ENST00000273342 SPTSSBQ8NFR3 76 aa8.07□□□□□ -1.12
COL8A1-202ENST00000273342 PCOTHQ58A44 107 aa8.06□□□□□ -1.12
COL8A1-202ENST00000273342 PRR15LQ9BU68 103 aa8.06□□□□□ -1.12
COL8A1-202ENST00000273342 CNBPP62633 177 aaKnown RBP8.06□□□□□ -1.12
COL8A1-202ENST00000273342 Q5VV11 94 aa8.05□□□□□ -1.12
COL8A1-202ENST00000273342 KRTAP29-1A8MX34 341 aaPredicted RBP8.04□□□□□ -1.12
COL8A1-202ENST00000273342 KRTAP1-5Q9BYS1 174 aa8.02□□□□□ -1.13
COL8A1-202ENST00000273342 Q8N9P0 234 aaPredicted RBP8.01□□□□□ -1.13
COL8A1-202ENST00000273342 IGLV9-49A0A0B4J1Y8 123 aa7.98□□□□□ -1.13
COL8A1-202ENST00000273342 A8MWP4 228 aa7.98□□□□□ -1.13
COL8A1-202ENST00000273342 C16orf90A8MZG2 172 aa7.98□□□□□ -1.13
COL8A1-202ENST00000273342 UBE2DNLQ8IWF7 75 aa7.97□□□□□ -1.13
COL8A1-202ENST00000273342 A6NED7 52 aa7.97□□□□□ -1.13
COL8A1-202ENST00000273342 NDUFS5O43920 106 aa7.97□□□□□ -1.13
COL8A1-202ENST00000273342 COA5Q86WW8 74 aa7.97□□□□□ -1.13
COL8A1-202ENST00000273342 LINC00472Q9H8W2 130 aa7.97□□□□□ -1.13
COL8A1-202ENST00000273342 SPAG11AQ6PDA7 123 aa7.95□□□□□ -1.14
COL8A1-202ENST00000273342 IGLV8-61A0A075B6I0 122 aa7.95□□□□□ -1.14
COL8A1-202ENST00000273342 MMP24-AS1A0A0U1RRL7 71 aa7.93□□□□□ -1.14
COL8A1-202ENST00000273342 K7EIL1 84 aa7.93□□□□□ -1.14
COL8A1-202ENST00000273342 DNAH1Q9P2D7 4330 aa7.93□□□□□ -1.14
COL8A1-202ENST00000273342 LCA10Q71F78 164 aa7.92□□□□□ -1.14
COL8A1-202ENST00000273342 C9orf163Q8N9P6 203 aa7.92□□□□□ -1.14
COL8A1-202ENST00000273342 SPANXA2-OT1Q8N9U9 137 aa7.92□□□□□ -1.14
COL8A1-202ENST00000273342 LIMD2Q9BT23 127 aa7.92□□□□□ -1.14
COL8A1-202ENST00000273342 PANO1I0J062 215 aa7.92□□□□□ -1.14
COL8A1-202ENST00000273342 IGHV6-1A0A0B4J1U7 121 aa7.91□□□□□ -1.14
COL8A1-202ENST00000273342 DNAH9Q9NYC9 4486 aa7.91□□□□□ -1.14
COL8A1-202ENST00000273342 CD164Q04900 197 aa7.9□□□□□ -1.14
COL8A1-202ENST00000273342 ANAPC11Q9NYG5 84 aa7.89□□□□□ -1.15
COL8A1-202ENST00000273342 H3BPC8 53 aa7.87□□□□□ -1.15
COL8A1-202ENST00000273342 CMYA5Q8N3K9 4069 aa7.86□□□□□ -1.15
COL8A1-202ENST00000273342 IGLV7-46A0A075B6I9 117 aa7.86□□□□□ -1.15
COL8A1-202ENST00000273342 HUWE1Q7Z6Z7 4374 aaKnown RBP7.85□□□□□ -1.15
COL8A1-202ENST00000273342 A0A087X002 238 aa7.84□□□□□ -1.15
COL8A1-202ENST00000273342 NOTCH2NLQ7Z3S9 236 aa7.84□□□□□ -1.15
COL8A1-202ENST00000273342 SPINK6Q6UWN8 80 aa7.83□□□□□ -1.16
COL8A1-202ENST00000273342 SPRR1BP22528 89 aa7.83□□□□□ -1.16
COL8A1-202ENST00000273342 MOBPQ13875 183 aa7.82□□□□□ -1.16
COL8A1-202ENST00000273342 C8orf17Q9NRJ1 99 aa7.82□□□□□ -1.16
COL8A1-202ENST00000273342 TGP01266 2768 aa7.82□□□□□ -1.16
COL8A1-202ENST00000273342 Q96NJ1 140 aa7.81□□□□□ -1.16
COL8A1-202ENST00000273342 DNAH7Q8WXX0 4024 aa7.81□□□□□ -1.16
COL8A1-202ENST00000273342 Q75L30 129 aa7.81□□□□□ -1.16
COL8A1-202ENST00000273342 LOC101927531A0A1B0GV80 90 aa7.81□□□□□ -1.16
COL8A1-202ENST00000273342 SPINK7P58062 85 aa7.81□□□□□ -1.16
COL8A1-202ENST00000273342 CDK2AP2O75956 126 aa7.79□□□□□ -1.16
COL8A1-202ENST00000273342 HRES1P13985 223 aa7.79□□□□□ -1.16
COL8A1-202ENST00000273342 PRR26Q8N8Z3 221 aa7.79□□□□□ -1.16
COL8A1-202ENST00000273342 KTN1-AS1Q86SY8 53 aa7.78□□□□□ -1.16
COL8A1-202ENST00000273342 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.78□□□□□ -1.16
COL8A1-202ENST00000273342 ATP11AUNQ6ZP68 121 aa7.78□□□□□ -1.16
COL8A1-202ENST00000273342 RBM12B-AS1Q9P1G2 102 aa7.77□□□□□ -1.17
COL8A1-202ENST00000273342 A0A1B0GVX0 72 aa7.75□□□□□ -1.17
COL8A1-202ENST00000273342 RETNLBQ9BQ08 111 aa7.75□□□□□ -1.17
COL8A1-202ENST00000273342 C14orf177Q52M58 125 aa7.74□□□□□ -1.17
COL8A1-202ENST00000273342 TP53AIP1Q9HCN2 124 aa7.74□□□□□ -1.17
COL8A1-202ENST00000273342 CDC42SE1Q9NRR8 79 aa7.74□□□□□ -1.17
COL8A1-202ENST00000273342 MRPL34Q9BQ48 92 aaKnown RBP7.73□□□□□ -1.17
COL8A1-202ENST00000273342 A6NN06 94 aa7.73□□□□□ -1.17
COL8A1-202ENST00000273342 KRTAP13-1Q8IUC0 172 aa7.73□□□□□ -1.17
COL8A1-202ENST00000273342 LINC01558Q9Y6Z2 57 aa7.72□□□□□ -1.17
COL8A1-202ENST00000273342 Q5W150 140 aa7.72□□□□□ -1.17
COL8A1-202ENST00000273342 MDFIQ99750 246 aa7.72□□□□□ -1.17
COL8A1-202ENST00000273342 DNAH3Q8TD57 4116 aa7.72□□□□□ -1.17
COL8A1-202ENST00000273342 FRAS1Q86XX4 4008 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms