RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 DMXL1Q9Y485 3027 aa9.89□□□□□ -0.83
TIMP3-201ENST00000266085 CFAP47Q6ZTR5 3102 aa9.88□□□□□ -0.83
TIMP3-201ENST00000266085 IGLV7-43P04211 117 aa9.87□□□□□ -0.83
TIMP3-201ENST00000266085 A0A1B0GU69 56 aa9.87□□□□□ -0.83
TIMP3-201ENST00000266085 IGLV5-37A0A075B6J1 123 aa9.86□□□□□ -0.83
TIMP3-201ENST00000266085 TNP2Q05952 138 aa9.86□□□□□ -0.83
TIMP3-201ENST00000266085 C8orf17Q9NRJ1 99 aa9.85□□□□□ -0.83
TIMP3-201ENST00000266085 SPEGQ15772 3267 aa9.84□□□□□ -0.83
TIMP3-201ENST00000266085 A0A1W2PNM2 257 aa9.84□□□□□ -0.83
TIMP3-201ENST00000266085 SPAG11AQ6PDA7 123 aa9.84□□□□□ -0.83
TIMP3-201ENST00000266085 LINC00304Q8N9R0 145 aa9.84□□□□□ -0.83
TIMP3-201ENST00000266085 SPRR4Q96PI1 79 aa9.84□□□□□ -0.83
TIMP3-201ENST00000266085 LINC00336Q6ZUF6 198 aa9.84□□□□□ -0.83
TIMP3-201ENST00000266085 ZANQ9Y493 2812 aa9.84□□□□□ -0.83
TIMP3-201ENST00000266085 A0A1B0GVX0 72 aa9.83□□□□□ -0.84
TIMP3-201ENST00000266085 ATP11AUNQ6ZP68 121 aa9.83□□□□□ -0.84
TIMP3-201ENST00000266085 APCP25054 2843 aa9.82□□□□□ -0.84
TIMP3-201ENST00000266085 ASH1LQ9NR48 2969 aaKnown RBP9.82□□□□□ -0.84
TIMP3-201ENST00000266085 IGLV5-48A0A075B6I7 105 aa9.81□□□□□ -0.84
TIMP3-201ENST00000266085 DSCR10P59022 87 aa9.8□□□□□ -0.84
TIMP3-201ENST00000266085 KMT2BQ9UMN6 2715 aaPredicted RBP9.79□□□□□ -0.84
TIMP3-201ENST00000266085 KLKP1Q107X0 134 aa9.79□□□□□ -0.84
TIMP3-201ENST00000266085 CELSR2Q9HCU4 2923 aa9.78□□□□□ -0.84
TIMP3-201ENST00000266085 J3QL48 77 aa9.78□□□□□ -0.84
TIMP3-201ENST00000266085 NIPBLQ6KC79 2804 aaeCLIP9.77□□□□□ -0.85
TIMP3-201ENST00000266085 TENM4Q6N022 2769 aa9.77□□□□□ -0.85
TIMP3-201ENST00000266085 OBSCN-AS1Q96MR7 158 aa9.75□□□□□ -0.85
TIMP3-201ENST00000266085 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.75□□□□□ -0.85
TIMP3-201ENST00000266085 LINC01600Q96MT4 127 aa9.74□□□□□ -0.85
TIMP3-201ENST00000266085 C4orf26Q17RF5 130 aa9.73□□□□□ -0.85
TIMP3-201ENST00000266085 PRO0628Q9UI54 55 aa9.72□□□□□ -0.85
TIMP3-201ENST00000266085 SPTBN5Q9NRC6 3674 aaKnown RBP9.7□□□□□ -0.86
TIMP3-201ENST00000266085 COA5Q86WW8 74 aa9.69□□□□□ -0.86
TIMP3-201ENST00000266085 LOC400499M0QZD8 3231 aa9.68□□□□□ -0.86
TIMP3-201ENST00000266085 C9orf92A6NGG3 77 aa9.67□□□□□ -0.86
TIMP3-201ENST00000266085 Q8NDZ9 215 aa9.66□□□□□ -0.86
TIMP3-201ENST00000266085 KRTAP1-5Q9BYS1 174 aa9.66□□□□□ -0.86
TIMP3-201ENST00000266085 IGLV8-61A0A075B6I0 122 aa9.66□□□□□ -0.86
TIMP3-201ENST00000266085 H7BZZ5 65 aa9.66□□□□□ -0.86
TIMP3-201ENST00000266085 CRYBG3Q68DQ2 2970 aa9.66□□□□□ -0.86
TIMP3-201ENST00000266085 DCHS2Q6V1P9 2916 aa9.64□□□□□ -0.87
TIMP3-201ENST00000266085 USP34Q70CQ2 3546 aa9.62□□□□□ -0.87
TIMP3-201ENST00000266085 NF1P21359 2839 aa9.61□□□□□ -0.87
TIMP3-201ENST00000266085 A8MUN3 132 aa9.61□□□□□ -0.87
TIMP3-201ENST00000266085 SPRR1AP35321 89 aa9.61□□□□□ -0.87
TIMP3-201ENST00000266085 DMBT1Q9UGM3 2413 aaPredicted RBP9.6□□□□□ -0.87
TIMP3-201ENST00000266085 CD164Q04900 197 aa9.58□□□□□ -0.88
TIMP3-201ENST00000266085 KRTAP26-1Q6PEX3 210 aa9.57□□□□□ -0.88
TIMP3-201ENST00000266085 PLAC8Q9NZF1 115 aa9.57□□□□□ -0.88
TIMP3-201ENST00000266085 FLG2Q5D862 2391 aaPredicted RBP9.56□□□□□ -0.88
TIMP3-201ENST00000266085 CYP4F30PQ9H0H9 118 aa9.55□□□□□ -0.88
TIMP3-201ENST00000266085 OCR1Q9BZK8 76 aa9.54□□□□□ -0.88
TIMP3-201ENST00000266085 PRR26Q8N8Z3 221 aa9.53□□□□□ -0.88
TIMP3-201ENST00000266085 UQCR11O14957 56 aa9.53□□□□□ -0.88
TIMP3-201ENST00000266085 COX6B2Q6YFQ2 88 aa9.53□□□□□ -0.88
TIMP3-201ENST00000266085 SPANXA2-OT1Q8N9U9 137 aa9.51□□□□□ -0.89
TIMP3-201ENST00000266085 FAM229BQ4G0N7 80 aa9.51□□□□□ -0.89
TIMP3-201ENST00000266085 FBN2P35556 2912 aa9.5□□□□□ -0.89
TIMP3-201ENST00000266085 HRNRQ86YZ3 2850 aaPredicted RBP9.49□□□□□ -0.89
TIMP3-201ENST00000266085 MYO15AQ9UKN7 3530 aa9.46□□□□□ -0.89
TIMP3-201ENST00000266085 SPRR1BP22528 89 aa9.46□□□□□ -0.89
TIMP3-201ENST00000266085 Q8N1X5 172 aa9.43□□□□□ -0.9
TIMP3-201ENST00000266085 RBM12B-AS1Q9P1G2 102 aa9.41□□□□□ -0.9
TIMP3-201ENST00000266085 KRTAP10-2P60368 255 aa9.4□□□□□ -0.9
TIMP3-201ENST00000266085 LCE6AA0A183 80 aa9.4□□□□□ -0.91
TIMP3-201ENST00000266085 MIR22HGQ0VDD5 57 aa9.39□□□□□ -0.91
TIMP3-201ENST00000266085 KRTAP10-1P60331 282 aa9.38□□□□□ -0.91
TIMP3-201ENST00000266085 MMP24-AS1A0A0U1RRL7 71 aa9.38□□□□□ -0.91
TIMP3-201ENST00000266085 IGLV7-46A0A075B6I9 117 aa9.37□□□□□ -0.91
TIMP3-201ENST00000266085 LINC00472Q9H8W2 130 aa9.35□□□□□ -0.91
TIMP3-201ENST00000266085 PANO1I0J062 215 aa9.34□□□□□ -0.91
TIMP3-201ENST00000266085 Q6ZR54 194 aa9.34□□□□□ -0.91
TIMP3-201ENST00000266085 DCHS1Q96JQ0 3298 aa9.31□□□□□ -0.92
TIMP3-201ENST00000266085 HRES1P13985 223 aa9.3□□□□□ -0.92
TIMP3-201ENST00000266085 Q6ZSA8 131 aa9.3□□□□□ -0.92
TIMP3-201ENST00000266085 MXRA5Q9NR99 2828 aa9.28□□□□□ -0.92
TIMP3-201ENST00000266085 KRTAP4-16G5E9R7 235 aaPredicted RBP9.28□□□□□ -0.92
TIMP3-201ENST00000266085 ZCCHC13Q8WW36 166 aaKnown RBP9.24□□□□□ -0.93
TIMP3-201ENST00000266085 TENM3Q9P273 2699 aa9.24□□□□□ -0.93
TIMP3-201ENST00000266085 Q8N9P0 234 aaPredicted RBP9.24□□□□□ -0.93
TIMP3-201ENST00000266085 Q5VSD8 79 aa9.22□□□□□ -0.93
TIMP3-201ENST00000266085 RELNP78509 3460 aa9.21□□□□□ -0.93
TIMP3-201ENST00000266085 Q1T7F1 81 aa9.19□□□□□ -0.94
TIMP3-201ENST00000266085 LINC01554Q52M75 96 aa9.19□□□□□ -0.94
TIMP3-201ENST00000266085 LINC00483Q53H64 154 aa9.19□□□□□ -0.94
TIMP3-201ENST00000266085 Q6ZRN7 208 aaPredicted RBP9.18□□□□□ -0.94
TIMP3-201ENST00000266085 CRIPTQ9P021 101 aa9.17□□□□□ -0.94
TIMP3-201ENST00000266085 CYSTM1Q9H1C7 97 aa9.17□□□□□ -0.94
TIMP3-201ENST00000266085 A0A0D9SG42 100 aa9.17□□□□□ -0.94
TIMP3-201ENST00000266085 Q5W150 140 aa9.17□□□□□ -0.94
TIMP3-201ENST00000266085 CDC42SE1Q9NRR8 79 aa9.16□□□□□ -0.94
TIMP3-201ENST00000266085 TENM1Q9UKZ4 2725 aa9.13□□□□□ -0.95
TIMP3-201ENST00000266085 SPINT4Q6UDR6 99 aa9.13□□□□□ -0.95
TIMP3-201ENST00000266085 MUC3AQ02505 3323 aa9.13□□□□□ -0.95
TIMP3-201ENST00000266085 SPINK7P58062 85 aa9.12□□□□□ -0.95
TIMP3-201ENST00000266085 KRTAP11-1Q8IUC1 163 aa9.11□□□□□ -0.95
TIMP3-201ENST00000266085 A0A087X002 238 aa9.09□□□□□ -0.95
TIMP3-201ENST00000266085 A0A1B0GU33 70 aa9.08□□□□□ -0.96
TIMP3-201ENST00000266085 PKD1L1Q8TDX9 2849 aa9.07□□□□□ -0.96
TIMP3-201ENST00000266085 KRTAP7-1Q8IUC3 87 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms