RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 A0A1B0GW54 56 aa9.11□□□□□ -0.95
PDLIM2-201ENST00000265810 CASC2Q6XLA1 102 aa9.11□□□□□ -0.95
PDLIM2-201ENST00000265810 IGFL1Q6UW32 110 aa9.1□□□□□ -0.95
PDLIM2-201ENST00000265810 SNURFQ9Y675 71 aa9.1□□□□□ -0.95
PDLIM2-201ENST00000265810 TRBV7-4A0A0J9YYF1 115 aa9.1□□□□□ -0.95
PDLIM2-201ENST00000265810 CUBNO60494 3623 aa9.09□□□□□ -0.95
PDLIM2-201ENST00000265810 RPS28P62857 69 aaKnown RBP9.09□□□□□ -0.95
PDLIM2-201ENST00000265810 Q6ZR54 194 aa9.08□□□□□ -0.96
PDLIM2-201ENST00000265810 HCG22E2RYF7 251 aa9.06□□□□□ -0.96
PDLIM2-201ENST00000265810 SPRR4Q96PI1 79 aa9.06□□□□□ -0.96
PDLIM2-201ENST00000265810 TRAV7A0A075B6U4 112 aa9.05□□□□□ -0.96
PDLIM2-201ENST00000265810 LCE6AA0A183 80 aa9.05□□□□□ -0.96
PDLIM2-201ENST00000265810 PLAC8Q9NZF1 115 aa9.03□□□□□ -0.96
PDLIM2-201ENST00000265810 KRTAP10-2P60368 255 aa9.03□□□□□ -0.96
PDLIM2-201ENST00000265810 VPS13CQ709C8 3753 aa9.02□□□□□ -0.97
PDLIM2-201ENST00000265810 SPRR1AP35321 89 aa9.02□□□□□ -0.97
PDLIM2-201ENST00000265810 LINC00208Q96KT6 92 aa9.01□□□□□ -0.97
PDLIM2-201ENST00000265810 RETNLBQ9BQ08 111 aa9.01□□□□□ -0.97
PDLIM2-201ENST00000265810 SSBP3-AS1Q7Z2R9 100 aa9□□□□□ -0.97
PDLIM2-201ENST00000265810 SMIM29Q86T20 159 aa9□□□□□ -0.97
PDLIM2-201ENST00000265810 A0A1W2PNM2 257 aa9□□□□□ -0.97
PDLIM2-201ENST00000265810 CHKB-CPT1BH3BT56 60 aa9□□□□□ -0.97
PDLIM2-201ENST00000265810 PANO1I0J062 215 aa8.99□□□□□ -0.97
PDLIM2-201ENST00000265810 PRR4Q16378 134 aa8.98□□□□□ -0.97
PDLIM2-201ENST00000265810 IGLV5-48A0A075B6I7 105 aa8.98□□□□□ -0.97
PDLIM2-201ENST00000265810 Q6ZRN7 208 aaPredicted RBP8.98□□□□□ -0.97
PDLIM2-201ENST00000265810 KRTAP10-1P60331 282 aa8.96□□□□□ -0.98
PDLIM2-201ENST00000265810 OBSCN-AS1Q96MR7 158 aa8.96□□□□□ -0.98
PDLIM2-201ENST00000265810 hDV103S1A0JD37 113 aa8.96□□□□□ -0.98
PDLIM2-201ENST00000265810 C4orf26Q17RF5 130 aa8.95□□□□□ -0.98
PDLIM2-201ENST00000265810 K7EQZ3 153 aa8.95□□□□□ -0.98
PDLIM2-201ENST00000265810 LINC01600Q96MT4 127 aa8.95□□□□□ -0.98
PDLIM2-201ENST00000265810 FAM236DA0A1B0GTK5 79 aa8.95□□□□□ -0.98
PDLIM2-201ENST00000265810 FAM236CP0DP71 79 aa8.95□□□□□ -0.98
PDLIM2-201ENST00000265810 TRRAPQ9Y4A5 3859 aa8.94□□□□□ -0.98
PDLIM2-201ENST00000265810 NDUFC1O43677 76 aa8.93□□□□□ -0.98
PDLIM2-201ENST00000265810 V9GYY9 64 aa8.93□□□□□ -0.98
PDLIM2-201ENST00000265810 PKD1L1Q8TDX9 2849 aa8.93□□□□□ -0.98
PDLIM2-201ENST00000265810 PRO0628Q9UI54 55 aa8.93□□□□□ -0.98
PDLIM2-201ENST00000265810 H0Y9P7 68 aa8.92□□□□□ -0.98
PDLIM2-201ENST00000265810 LINC00304Q8N9R0 145 aa8.92□□□□□ -0.98
PDLIM2-201ENST00000265810 A8MWP4 228 aa8.91□□□□□ -0.98
PDLIM2-201ENST00000265810 ZNF469Q96JG9 3925 aaPredicted RBP8.91□□□□□ -0.98
PDLIM2-201ENST00000265810 TMEM254Q8TBM7 123 aa8.91□□□□□ -0.98
PDLIM2-201ENST00000265810 LINC00313P59037 77 aa8.9□□□□□ -0.99
PDLIM2-201ENST00000265810 BRK1Q8WUW1 75 aa8.89□□□□□ -0.99
PDLIM2-201ENST00000265810 PCOTHQ58A44 107 aa8.89□□□□□ -0.99
PDLIM2-201ENST00000265810 SERP1Q9Y6X1 66 aa8.86□□□□□ -0.99
PDLIM2-201ENST00000265810 SPAG11AQ6PDA7 123 aa8.85□□□□□ -0.99
PDLIM2-201ENST00000265810 C1orf195Q5TG92 126 aa8.85□□□□□ -0.99
PDLIM2-201ENST00000265810 PRR15Q8IV56 129 aa8.85□□□□□ -0.99
PDLIM2-201ENST00000265810 KRTAP4-16G5E9R7 235 aaPredicted RBP8.84□□□□□ -0.99
PDLIM2-201ENST00000265810 SMIM26A0A096LP01 95 aa8.84□□□□□ -0.99
PDLIM2-201ENST00000265810 A0A0U1RQV1 116 aa8.84□□□□□ -0.99
PDLIM2-201ENST00000265810 TENM2Q9NT68 2774 aa8.84□□□□□ -1
PDLIM2-201ENST00000265810 C1orf64Q8NEQ6 169 aa8.83□□□□□ -1
PDLIM2-201ENST00000265810 KRTAP7-1Q8IUC3 87 aa8.83□□□□□ -1
PDLIM2-201ENST00000265810 PRR26Q8N8Z3 221 aa8.83□□□□□ -1
PDLIM2-201ENST00000265810 TP53AIP1Q9HCN2 124 aa8.83□□□□□ -1
PDLIM2-201ENST00000265810 Q96NJ1 140 aa8.82□□□□□ -1
PDLIM2-201ENST00000265810 IGKV2D-30A0A075B6S6 120 aa8.82□□□□□ -1
PDLIM2-201ENST00000265810 IGKV2-30P06310 120 aa8.82□□□□□ -1
PDLIM2-201ENST00000265810 J3QL48 77 aa8.81□□□□□ -1
PDLIM2-201ENST00000265810 DSCR10P59022 87 aa8.8□□□□□ -1
PDLIM2-201ENST00000265810 SEC61GP60059 68 aa8.8□□□□□ -1
PDLIM2-201ENST00000265810 KRTAP11-1Q8IUC1 163 aa8.8□□□□□ -1
PDLIM2-201ENST00000265810 SPRR1BP22528 89 aa8.8□□□□□ -1
PDLIM2-201ENST00000265810 A0A1B0GVX0 72 aa8.79□□□□□ -1
PDLIM2-201ENST00000265810 C8orf17Q9NRJ1 99 aa8.79□□□□□ -1
PDLIM2-201ENST00000265810 TGP01266 2768 aa8.79□□□□□ -1
PDLIM2-201ENST00000265810 MRPL34Q9BQ48 92 aaKnown RBP8.79□□□□□ -1
PDLIM2-201ENST00000265810 C8orf87E5RJ46 101 aa8.78□□□□□ -1
PDLIM2-201ENST00000265810 ATP5EP56381 51 aaPredicted RBP8.78□□□□□ -1
PDLIM2-201ENST00000265810 SPINK1P00995 79 aa8.78□□□□□ -1
PDLIM2-201ENST00000265810 TRAV22A0A0B4J277 110 aa8.76□□□□□ -1.01
PDLIM2-201ENST00000265810 FAM229BQ4G0N7 80 aa8.76□□□□□ -1.01
PDLIM2-201ENST00000265810 MPLKIPQ8TAP9 179 aa8.75□□□□□ -1.01
PDLIM2-201ENST00000265810 C9orf92A6NGG3 77 aa8.73□□□□□ -1.01
PDLIM2-201ENST00000265810 AKAP9Q99996 3911 aa8.72□□□□□ -1.01
PDLIM2-201ENST00000265810 CD164Q04900 197 aa8.72□□□□□ -1.01
PDLIM2-201ENST00000265810 IGLV8-61A0A075B6I0 122 aa8.72□□□□□ -1.01
PDLIM2-201ENST00000265810 Q5XG85 94 aa8.7□□□□□ -1.02
PDLIM2-201ENST00000265810 Q5VSD8 79 aa8.68□□□□□ -1.02
PDLIM2-201ENST00000265810 DMBT1Q9UGM3 2413 aaPredicted RBP8.67□□□□□ -1.02
PDLIM2-201ENST00000265810 CYSTM1Q9H1C7 97 aa8.66□□□□□ -1.02
PDLIM2-201ENST00000265810 H3BPC8 53 aa8.65□□□□□ -1.02
PDLIM2-201ENST00000265810 ATP11AUNQ6ZP68 121 aa8.65□□□□□ -1.03
PDLIM2-201ENST00000265810 LINC00483Q53H64 154 aa8.64□□□□□ -1.03
PDLIM2-201ENST00000265810 OXTP01178 125 aa8.62□□□□□ -1.03
PDLIM2-201ENST00000265810 A0A087X002 238 aa8.6□□□□□ -1.03
PDLIM2-201ENST00000265810 LINC00472Q9H8W2 130 aa8.6□□□□□ -1.03
PDLIM2-201ENST00000265810 LOC101927531A0A1B0GV80 90 aa8.6□□□□□ -1.03
PDLIM2-201ENST00000265810 C7orf65Q6ZTY9 151 aa8.58□□□□□ -1.04
PDLIM2-201ENST00000265810 FLG2Q5D862 2391 aaPredicted RBP8.57□□□□□ -1.04
PDLIM2-201ENST00000265810 H7BZZ5 65 aa8.57□□□□□ -1.04
PDLIM2-201ENST00000265810 KRTAP13-1Q8IUC0 172 aa8.57□□□□□ -1.04
PDLIM2-201ENST00000265810 PMAIP1Q13794 54 aa8.56□□□□□ -1.04
PDLIM2-201ENST00000265810 KLKP1Q107X0 134 aa8.54□□□□□ -1.04
PDLIM2-201ENST00000265810 SPTSSBQ8NFR3 76 aa8.54□□□□□ -1.04
PDLIM2-201ENST00000265810 OCR1Q9BZK8 76 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms