RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 H1FX-AS1Q4G0G2 97 aa10.33□□□□□ -0.76
USP13-201ENST00000263966 NOTCH1P46531 2555 aa10.33□□□□□ -0.76
USP13-201ENST00000263966 A0A1W2PNM2 257 aa10.31□□□□□ -0.76
USP13-201ENST00000263966 A0A096LNT2 108 aa10.31□□□□□ -0.76
USP13-201ENST00000263966 PLAC8Q9NZF1 115 aa10.3□□□□□ -0.76
USP13-201ENST00000263966 GOLGB1Q14789 3259 aaKnown RBP10.3□□□□□ -0.76
USP13-201ENST00000263966 C5orf42Q9H799 3197 aa10.29□□□□□ -0.76
USP13-201ENST00000263966 SPINK7P58062 85 aa10.29□□□□□ -0.76
USP13-201ENST00000263966 DNAH12Q6ZR08 3092 aa10.25□□□□□ -0.77
USP13-201ENST00000263966 M0QZ58 72 aa10.22□□□□□ -0.77
USP13-201ENST00000263966 FP248Q71RG6 208 aaPredicted RBP10.22□□□□□ -0.77
USP13-201ENST00000263966 Q75L30 129 aa10.21□□□□□ -0.78
USP13-201ENST00000263966 WIPF1O43516 503 aa10.16□□□□□ -0.78
USP13-201ENST00000263966 LCE6AA0A183 80 aa10.16□□□□□ -0.78
USP13-201ENST00000263966 OCR1Q9BZK8 76 aa10.15□□□□□ -0.78
USP13-201ENST00000263966 EIF4EBP3O60516 100 aaPredicted RBP10.14□□□□□ -0.79
USP13-201ENST00000263966 KRTAP1-3Q8IUG1 177 aa10.14□□□□□ -0.79
USP13-201ENST00000263966 GCN1Q92616 2671 aaKnown RBP10.14□□□□□ -0.79
USP13-201ENST00000263966 RPL37P61927 97 aaKnown RBP10.12□□□□□ -0.79
USP13-201ENST00000263966 ROMO1P60602 79 aa10.1□□□□□ -0.79
USP13-201ENST00000263966 Q8N9P0 234 aaPredicted RBP10.09□□□□□ -0.79
USP13-201ENST00000263966 Q5W150 140 aa10.08□□□□□ -0.8
USP13-201ENST00000263966 PCNTO95613 3336 aa10.07□□□□□ -0.8
USP13-201ENST00000263966 KRTAP1-1Q07627 177 aa10.06□□□□□ -0.8
USP13-201ENST00000263966 ZNF292O60281 2723 aa10.03□□□□□ -0.8
USP13-201ENST00000263966 ADM2Q7Z4H4 148 aa10.03□□□□□ -0.8
USP13-201ENST00000263966 LINC01558Q9Y6Z2 57 aa10.01□□□□□ -0.81
USP13-201ENST00000263966 MMP24-AS1A0A0U1RRL7 71 aa10□□□□□ -0.81
USP13-201ENST00000263966 IGSF10Q6WRI0 2623 aa9.99□□□□□ -0.81
USP13-201ENST00000263966 APCP25054 2843 aa9.95□□□□□ -0.82
USP13-201ENST00000263966 CFAP54Q96N23 3096 aa9.94□□□□□ -0.82
USP13-201ENST00000263966 LAMA2P24043 3122 aaKnown RBP9.89□□□□□ -0.83
USP13-201ENST00000263966 SPRR1AP35321 89 aa9.88□□□□□ -0.83
USP13-201ENST00000263966 LINC00472Q9H8W2 130 aa9.87□□□□□ -0.83
USP13-201ENST00000263966 KRTAP10-1P60331 282 aa9.87□□□□□ -0.83
USP13-201ENST00000263966 UTRNP46939 3433 aa9.87□□□□□ -0.83
USP13-201ENST00000263966 A0A0C4DFX4 3053 aa9.87□□□□□ -0.83
USP13-201ENST00000263966 SPRR1BP22528 89 aa9.86□□□□□ -0.83
USP13-201ENST00000263966 MAP1AP78559 2803 aaPredicted RBP9.84□□□□□ -0.83
USP13-201ENST00000263966 PANO1I0J062 215 aa9.84□□□□□ -0.83
USP13-201ENST00000263966 NSD1Q96L73 2696 aaPredicted RBP9.82□□□□□ -0.84
USP13-201ENST00000263966 C20orf166-AS1Q96NR2 134 aa9.81□□□□□ -0.84
USP13-201ENST00000263966 KRTAP10-2P60368 255 aa9.78□□□□□ -0.84
USP13-201ENST00000263966 A8MUU9 505 aa9.75□□□□□ -0.85
USP13-201ENST00000263966 Q8NDZ9 215 aa9.74□□□□□ -0.85
USP13-201ENST00000263966 H3BS24 57 aa9.73□□□□□ -0.85
USP13-201ENST00000263966 RPS29P62273 56 aaKnown RBP9.71□□□□□ -0.85
USP13-201ENST00000263966 Q6ZR54 194 aa9.71□□□□□ -0.86
USP13-201ENST00000263966 PRAC1Q96KF2 57 aa9.7□□□□□ -0.86
USP13-201ENST00000263966 Q5VV11 94 aa9.69□□□□□ -0.86
USP13-201ENST00000263966 ASB16-AS1Q495Z4 193 aa9.67□□□□□ -0.86
USP13-201ENST00000263966 KRTAP26-1Q6PEX3 210 aa9.67□□□□□ -0.86
USP13-201ENST00000263966 MGAQ8IWI9 3026 aa9.67□□□□□ -0.86
USP13-201ENST00000263966 CRYBG3Q68DQ2 2970 aa9.66□□□□□ -0.86
USP13-201ENST00000263966 FRYQ5TBA9 3013 aa9.65□□□□□ -0.86
USP13-201ENST00000263966 NBEAL2Q6ZNJ1 2754 aa9.65□□□□□ -0.86
USP13-201ENST00000263966 UTP20O75691 2785 aaKnown RBP9.64□□□□□ -0.87
USP13-201ENST00000263966 SPATA8Q6RVD6 105 aa9.63□□□□□ -0.87
USP13-201ENST00000263966 KRTAP1-5Q9BYS1 174 aa9.63□□□□□ -0.87
USP13-201ENST00000263966 TNP1P09430 55 aa9.62□□□□□ -0.87
USP13-201ENST00000263966 KRTAP16-1A8MUX0 517 aa9.57□□□□□ -0.88
USP13-201ENST00000263966 TRANK1O15050 2925 aa9.55□□□□□ -0.88
USP13-201ENST00000263966 WDFY4Q6ZS81 3184 aa9.54□□□□□ -0.88
USP13-201ENST00000263966 A0A087X002 238 aa9.53□□□□□ -0.88
USP13-201ENST00000263966 FLNCQ14315 2725 aa9.49□□□□□ -0.89
USP13-201ENST00000263966 UBR5O95071 2799 aaPredicted RBP9.49□□□□□ -0.89
USP13-201ENST00000263966 TRIOO75962 3097 aa9.47□□□□□ -0.89
USP13-201ENST00000263966 XIRP2A4UGR9 3374 aa9.46□□□□□ -0.89
USP13-201ENST00000263966 DSPP15924 2871 aaKnown RBP9.43□□□□□ -0.9
USP13-201ENST00000263966 PRUNE2Q8WUY3 3088 aa9.42□□□□□ -0.9
USP13-201ENST00000263966 TENM1Q9UKZ4 2725 aa9.4□□□□□ -0.9
USP13-201ENST00000263966 PRO2289Q9P1D8 64 aa9.39□□□□□ -0.91
USP13-201ENST00000263966 FRYLO94915 3013 aa9.38□□□□□ -0.91
USP13-201ENST00000263966 VPS13AQ96RL7 3174 aa9.38□□□□□ -0.91
USP13-201ENST00000263966 KRTAP21-3Q3LHN1 58 aa9.37□□□□□ -0.91
USP13-201ENST00000263966 Q5XG85 94 aa9.36□□□□□ -0.91
USP13-201ENST00000263966 C10orf95Q9H7T3 257 aa9.36□□□□□ -0.91
USP13-201ENST00000263966 KRTAP10-8P60410 259 aa9.32□□□□□ -0.92
USP13-201ENST00000263966 KRTAP4-16G5E9R7 235 aaPredicted RBP9.3□□□□□ -0.92
USP13-201ENST00000263966 KRTAP25-1Q3LHN0 102 aa9.3□□□□□ -0.92
USP13-201ENST00000263966 PP632Q6XCG6 107 aa9.29□□□□□ -0.92
USP13-201ENST00000263966 REV3LO60673 3130 aa9.29□□□□□ -0.92
USP13-201ENST00000263966 CHD7Q9P2D1 2997 aa9.28□□□□□ -0.92
USP13-201ENST00000263966 P0C880 135 aa9.28□□□□□ -0.92
USP13-201ENST00000263966 ITPR1Q14643 2758 aa9.28□□□□□ -0.92
USP13-201ENST00000263966 NOTCH2NLQ7Z3S9 236 aa9.25□□□□□ -0.93
USP13-201ENST00000263966 MKI67P46013 3256 aaKnown RBP9.24□□□□□ -0.93
USP13-201ENST00000263966 Q6ZRN7 208 aaPredicted RBP9.22□□□□□ -0.93
USP13-201ENST00000263966 KRTAP29-1A8MX34 341 aaPredicted RBP9.22□□□□□ -0.93
USP13-201ENST00000263966 KALRNO60229 2985 aa9.21□□□□□ -0.94
USP13-201ENST00000263966 HIVEP1P15822 2718 aa9.21□□□□□ -0.94
USP13-201ENST00000263966 CELSR3Q9NYQ7 3312 aa9.2□□□□□ -0.94
USP13-201ENST00000263966 TENM3Q9P273 2699 aa9.19□□□□□ -0.94
USP13-201ENST00000263966 LRBAP50851 2863 aa9.18□□□□□ -0.94
USP13-201ENST00000263966 FREM2Q5SZK8 3169 aa9.18□□□□□ -0.94
USP13-201ENST00000263966 ASH1LQ9NR48 2969 aaKnown RBP9.18□□□□□ -0.94
USP13-201ENST00000263966 NF1P21359 2839 aa9.17□□□□□ -0.94
USP13-201ENST00000263966 A8MU10 97 aa9.17□□□□□ -0.94
USP13-201ENST00000263966 CHD9Q3L8U1 2897 aa9.17□□□□□ -0.94
USP13-201ENST00000263966 CYSTM1Q9H1C7 97 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms