RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.53□□□□□ -1.2
SMG6-201ENST00000263073 FRYLO94915 3013 aa7.52□□□□□ -1.21
SMG6-201ENST00000263073 SPINK7P58062 85 aa7.52□□□□□ -1.21
SMG6-201ENST00000263073 Q5VV11 94 aa7.51□□□□□ -1.21
SMG6-201ENST00000263073 A0A1B0GU33 70 aa7.5□□□□□ -1.21
SMG6-201ENST00000263073 KRTAP1-3Q8IUG1 177 aa7.5□□□□□ -1.21
SMG6-201ENST00000263073 CSAG1Q6PB30 78 aa7.5□□□□□ -1.21
SMG6-201ENST00000263073 MYO15AQ9UKN7 3530 aa7.49□□□□□ -1.21
SMG6-201ENST00000263073 MMP24-AS1A0A0U1RRL7 71 aa7.49□□□□□ -1.21
SMG6-201ENST00000263073 WDFY4Q6ZS81 3184 aa7.49□□□□□ -1.21
SMG6-201ENST00000263073 TNP2Q05952 138 aa7.47□□□□□ -1.21
SMG6-201ENST00000263073 FREM2Q5SZK8 3169 aa7.46□□□□□ -1.22
SMG6-201ENST00000263073 LINC01558Q9Y6Z2 57 aa7.45□□□□□ -1.22
SMG6-201ENST00000263073 LUZP6Q538Z0 58 aa7.45□□□□□ -1.22
SMG6-201ENST00000263073 KRTAP1-1Q07627 177 aa7.44□□□□□ -1.22
SMG6-201ENST00000263073 COL6A3P12111 3177 aa7.42□□□□□ -1.22
SMG6-201ENST00000263073 CELSR3Q9NYQ7 3312 aa7.41□□□□□ -1.22
SMG6-201ENST00000263073 DSPP15924 2871 aaKnown RBP7.39□□□□□ -1.23
SMG6-201ENST00000263073 MGAM2Q2M2H8 2515 aa7.39□□□□□ -1.23
SMG6-201ENST00000263073 ZNF292O60281 2723 aa7.39□□□□□ -1.23
SMG6-201ENST00000263073 EPG5Q9HCE0 2579 aa7.39□□□□□ -1.23
SMG6-201ENST00000263073 Q5W150 140 aa7.38□□□□□ -1.23
SMG6-201ENST00000263073 TNRC18O15417 2968 aaPredicted RBP7.38□□□□□ -1.23
SMG6-201ENST00000263073 CAMK2N1Q7Z7J9 78 aa7.37□□□□□ -1.23
SMG6-201ENST00000263073 USP34Q70CQ2 3546 aa7.37□□□□□ -1.23
SMG6-201ENST00000263073 MGAQ8IWI9 3026 aa7.37□□□□□ -1.23
SMG6-201ENST00000263073 NBEAQ8NFP9 2946 aa7.36□□□□□ -1.23
SMG6-201ENST00000263073 HECTD1Q9ULT8 2610 aa7.36□□□□□ -1.23
SMG6-201ENST00000263073 FRYQ5TBA9 3013 aa7.36□□□□□ -1.23
SMG6-201ENST00000263073 Q6ZSA8 131 aa7.35□□□□□ -1.23
SMG6-201ENST00000263073 LINC00472Q9H8W2 130 aa7.34□□□□□ -1.23
SMG6-201ENST00000263073 ZCCHC13Q8WW36 166 aaKnown RBP7.33□□□□□ -1.24
SMG6-201ENST00000263073 SPRR1AP35321 89 aa7.31□□□□□ -1.24
SMG6-201ENST00000263073 S4R3F8 94 aa7.29□□□□□ -1.24
SMG6-201ENST00000263073 FLNAP21333 2647 aaKnown RBP7.28□□□□□ -1.24
SMG6-201ENST00000263073 KRTAP26-1Q6PEX3 210 aa7.27□□□□□ -1.24
SMG6-201ENST00000263073 KRTAP1-5Q9BYS1 174 aa7.27□□□□□ -1.25
SMG6-201ENST00000263073 DMAC1Q96GE9 116 aa7.27□□□□□ -1.25
SMG6-201ENST00000263073 AKAP13Q12802 2813 aa7.25□□□□□ -1.25
SMG6-201ENST00000263073 BOD1L1Q8NFC6 3051 aa7.25□□□□□ -1.25
SMG6-201ENST00000263073 SPATA8Q6RVD6 105 aa7.25□□□□□ -1.25
SMG6-201ENST00000263073 MUC3AQ02505 3323 aa7.24□□□□□ -1.25
SMG6-201ENST00000263073 LINC00483Q53H64 154 aa7.24□□□□□ -1.25
SMG6-201ENST00000263073 ITPR3Q14573 2671 aa7.23□□□□□ -1.25
SMG6-201ENST00000263073 PLAC8Q9NZF1 115 aa7.23□□□□□ -1.25
SMG6-201ENST00000263073 ATRQ13535 2644 aa7.22□□□□□ -1.25
SMG6-201ENST00000263073 M0R2T5 61 aa7.21□□□□□ -1.25
SMG6-201ENST00000263073 CHD6Q8TD26 2715 aa7.2□□□□□ -1.26
SMG6-201ENST00000263073 LOC400499M0QZD8 3231 aa7.2□□□□□ -1.26
SMG6-201ENST00000263073 FLNBO75369 2602 aaKnown RBP7.19□□□□□ -1.26
SMG6-201ENST00000263073 PANO1I0J062 215 aa7.17□□□□□ -1.26
SMG6-201ENST00000263073 ROMO1P60602 79 aa7.17□□□□□ -1.26
SMG6-201ENST00000263073 WDFY3Q8IZQ1 3526 aa7.17□□□□□ -1.26
SMG6-201ENST00000263073 DMDP11532 3685 aa7.17□□□□□ -1.26
SMG6-201ENST00000263073 SPRR1BP22528 89 aa7.16□□□□□ -1.26
SMG6-201ENST00000263073 A0A087X002 238 aa7.16□□□□□ -1.26
SMG6-201ENST00000263073 NOTCH2NLQ7Z3S9 236 aa7.16□□□□□ -1.26
SMG6-201ENST00000263073 R4GN34 69 aa7.15□□□□□ -1.26
SMG6-201ENST00000263073 ADGRG4Q8IZF6 3080 aa7.15□□□□□ -1.26
SMG6-201ENST00000263073 H1FX-AS1Q4G0G2 97 aa7.15□□□□□ -1.27
SMG6-201ENST00000263073 A8MU10 97 aa7.14□□□□□ -1.27
SMG6-201ENST00000263073 CENPEQ02224 2701 aa7.14□□□□□ -1.27
SMG6-201ENST00000263073 RPL37P61927 97 aaKnown RBP7.13□□□□□ -1.27
SMG6-201ENST00000263073 DMXL1Q9Y485 3027 aa7.13□□□□□ -1.27
SMG6-201ENST00000263073 A0A0A0MQY5 61 aa7.12□□□□□ -1.27
SMG6-201ENST00000263073 ADM2Q7Z4H4 148 aa7.12□□□□□ -1.27
SMG6-201ENST00000263073 KRTAP10-2P60368 255 aa7.11□□□□□ -1.27
SMG6-201ENST00000263073 DMXL2Q8TDJ6 3036 aa7.11□□□□□ -1.27
SMG6-201ENST00000263073 KRTAP29-1A8MX34 341 aaPredicted RBP7.1□□□□□ -1.27
SMG6-201ENST00000263073 MAST4O15021 2626 aa7.09□□□□□ -1.27
SMG6-201ENST00000263073 Q6ZR54 194 aa7.09□□□□□ -1.27
SMG6-201ENST00000263073 KRTAP4-16G5E9R7 235 aaPredicted RBP7.08□□□□□ -1.28
SMG6-201ENST00000263073 M0QZ58 72 aa7.08□□□□□ -1.28
SMG6-201ENST00000263073 KRTAP10-1P60331 282 aa7.08□□□□□ -1.28
SMG6-201ENST00000263073 GCN1Q92616 2671 aaKnown RBP7.07□□□□□ -1.28
SMG6-201ENST00000263073 MAP1AP78559 2803 aaPredicted RBP7.06□□□□□ -1.28
SMG6-201ENST00000263073 KRTAP11-1Q8IUC1 163 aa7.05□□□□□ -1.28
SMG6-201ENST00000263073 NBEAL2Q6ZNJ1 2754 aa7.05□□□□□ -1.28
SMG6-201ENST00000263073 CFAP46Q8IYW2 2715 aa7.05□□□□□ -1.28
SMG6-201ENST00000263073 CFAP47Q6ZTR5 3102 aa7.03□□□□□ -1.28
SMG6-201ENST00000263073 ATMQ13315 3056 aa7.03□□□□□ -1.28
SMG6-201ENST00000263073 KALRNO60229 2985 aa7.03□□□□□ -1.28
SMG6-201ENST00000263073 A6NN06 94 aa7.02□□□□□ -1.29
SMG6-201ENST00000263073 NBEAL1Q6ZS30 2694 aa7.01□□□□□ -1.29
SMG6-201ENST00000263073 TACC2O95359 2948 aa7.01□□□□□ -1.29
SMG6-201ENST00000263073 UNC79Q9P2D8 2635 aa6.99□□□□□ -1.29
SMG6-201ENST00000263073 TEX15Q9BXT5 2789 aa6.99□□□□□ -1.29
SMG6-201ENST00000263073 Q5VSD8 79 aa6.98□□□□□ -1.29
SMG6-201ENST00000263073 ASPMQ8IZT6 3477 aa6.96□□□□□ -1.29
SMG6-201ENST00000263073 ZZEF1O43149 2961 aa6.96□□□□□ -1.3
SMG6-201ENST00000263073 LRBAP50851 2863 aa6.95□□□□□ -1.3
SMG6-201ENST00000263073 HELZ2Q9BYK8 2649 aaKnown RBP6.95□□□□□ -1.3
SMG6-201ENST00000263073 FLG2Q5D862 2391 aaPredicted RBP6.95□□□□□ -1.3
SMG6-201ENST00000263073 KRTAP25-1Q3LHN0 102 aa6.94□□□□□ -1.3
SMG6-201ENST00000263073 KRTAP7-1Q8IUC3 87 aa6.94□□□□□ -1.3
SMG6-201ENST00000263073 LAMA5O15230 3695 aa6.93□□□□□ -1.3
SMG6-201ENST00000263073 FLNCQ14315 2725 aa6.93□□□□□ -1.3
SMG6-201ENST00000263073 KRTAP16-1A8MUX0 517 aa6.9□□□□□ -1.31
SMG6-201ENST00000263073 ZFHX4Q86UP3 3567 aa6.9□□□□□ -1.31
SMG6-201ENST00000263073 NDUFAF8A1L188 74 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms