RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 NBEAQ8NFP9 2946 aa4.61□□□□□ -1.67
HERC2-201ENST00000261609 ZNF861PO60384 105 aa4.61□□□□□ -1.67
HERC2-201ENST00000261609 NSD1Q96L73 2696 aaPredicted RBP4.61□□□□□ -1.67
HERC2-201ENST00000261609 PCNTO95613 3336 aa4.61□□□□□ -1.67
HERC2-201ENST00000261609 LINC00304Q8N9R0 145 aa4.6□□□□□ -1.67
HERC2-201ENST00000261609 DMAC1Q96GE9 116 aa4.59□□□□□ -1.67
HERC2-201ENST00000261609 KALRNO60229 2985 aa4.59□□□□□ -1.68
HERC2-201ENST00000261609 TRIOO75962 3097 aa4.59□□□□□ -1.68
HERC2-201ENST00000261609 SPRR4Q96PI1 79 aa4.58□□□□□ -1.68
HERC2-201ENST00000261609 PRUNE2Q8WUY3 3088 aa4.57□□□□□ -1.68
HERC2-201ENST00000261609 A0A0A0MQY5 61 aa4.57□□□□□ -1.68
HERC2-201ENST00000261609 CNBPP62633 177 aaKnown RBP4.57□□□□□ -1.68
HERC2-201ENST00000261609 KRTAP16-1A8MUX0 517 aa4.57□□□□□ -1.68
HERC2-201ENST00000261609 IGLV5-37A0A075B6J1 123 aa4.57□□□□□ -1.68
HERC2-201ENST00000261609 ASH1LQ9NR48 2969 aaKnown RBP4.56□□□□□ -1.68
HERC2-201ENST00000261609 HRES1P13985 223 aa4.56□□□□□ -1.68
HERC2-201ENST00000261609 C19orf73Q9NVV2 129 aa4.56□□□□□ -1.68
HERC2-201ENST00000261609 LRBAP50851 2863 aa4.55□□□□□ -1.68
HERC2-201ENST00000261609 C9orf92A6NGG3 77 aa4.54□□□□□ -1.68
HERC2-201ENST00000261609 ITPR2Q14571 2701 aa4.53□□□□□ -1.68
HERC2-201ENST00000261609 FRYLO94915 3013 aa4.53□□□□□ -1.68
HERC2-201ENST00000261609 ASB16-AS1Q495Z4 193 aa4.53□□□□□ -1.68
HERC2-201ENST00000261609 PSORS1C2Q9UIG4 136 aa4.51□□□□□ -1.69
HERC2-201ENST00000261609 KRTAP10-11P60412 298 aa4.51□□□□□ -1.69
HERC2-201ENST00000261609 DMXL2Q8TDJ6 3036 aa4.51□□□□□ -1.69
HERC2-201ENST00000261609 IGLV7-43P04211 117 aa4.51□□□□□ -1.69
HERC2-201ENST00000261609 A0A087WTM6 91 aa4.5□□□□□ -1.69
HERC2-201ENST00000261609 KRTAP24-1Q3LI83 254 aa4.5□□□□□ -1.69
HERC2-201ENST00000261609 VPS13AQ96RL7 3174 aa4.49□□□□□ -1.69
HERC2-201ENST00000261609 CHD9Q3L8U1 2897 aa4.49□□□□□ -1.69
HERC2-201ENST00000261609 COX6B2Q6YFQ2 88 aa4.49□□□□□ -1.69
HERC2-201ENST00000261609 CASC10Q5T4H9 136 aa4.48□□□□□ -1.69
HERC2-201ENST00000261609 TACC2O95359 2948 aa4.48□□□□□ -1.69
HERC2-201ENST00000261609 IGSF10Q6WRI0 2623 aa4.47□□□□□ -1.69
HERC2-201ENST00000261609 ROMO1P60602 79 aa4.47□□□□□ -1.69
HERC2-201ENST00000261609 A6NN06 94 aa4.46□□□□□ -1.69
HERC2-201ENST00000261609 K7EIL1 84 aa4.46□□□□□ -1.7
HERC2-201ENST00000261609 Q8NDZ9 215 aa4.45□□□□□ -1.7
HERC2-201ENST00000261609 LINC00472Q9H8W2 130 aa4.45□□□□□ -1.7
HERC2-201ENST00000261609 LINC00483Q53H64 154 aa4.44□□□□□ -1.7
HERC2-201ENST00000261609 MMP24-AS1A0A0U1RRL7 71 aa4.44□□□□□ -1.7
HERC2-201ENST00000261609 KMT2BQ9UMN6 2715 aaPredicted RBP4.43□□□□□ -1.7
HERC2-201ENST00000261609 CELSR2Q9HCU4 2923 aa4.43□□□□□ -1.7
HERC2-201ENST00000261609 WWC2-AS2Q96NR7 200 aa4.43□□□□□ -1.7
HERC2-201ENST00000261609 UTRNP46939 3433 aa4.41□□□□□ -1.7
HERC2-201ENST00000261609 KRTAP10-3P60369 221 aa4.41□□□□□ -1.7
HERC2-201ENST00000261609 REV3LO60673 3130 aa4.41□□□□□ -1.7
HERC2-201ENST00000261609 Q5W150 140 aa4.41□□□□□ -1.7
HERC2-201ENST00000261609 SPATA8Q6RVD6 105 aa4.41□□□□□ -1.7
HERC2-201ENST00000261609 ZCCHC13Q8WW36 166 aaKnown RBP4.41□□□□□ -1.7
HERC2-201ENST00000261609 FLNCQ14315 2725 aa4.41□□□□□ -1.7
HERC2-201ENST00000261609 SPRR1AP35321 89 aa4.4□□□□□ -1.71
HERC2-201ENST00000261609 WDFY4Q6ZS81 3184 aa4.4□□□□□ -1.71
HERC2-201ENST00000261609 HIVEP1P15822 2718 aa4.4□□□□□ -1.71
HERC2-201ENST00000261609 H1FX-AS1Q4G0G2 97 aa4.38□□□□□ -1.71
HERC2-201ENST00000261609 COL12A1Q99715 3063 aa4.38□□□□□ -1.71
HERC2-201ENST00000261609 J3QL48 77 aa4.37□□□□□ -1.71
HERC2-201ENST00000261609 RPL37P61927 97 aaKnown RBP4.37□□□□□ -1.71
HERC2-201ENST00000261609 S4R3F8 94 aa4.37□□□□□ -1.71
HERC2-201ENST00000261609 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.37□□□□□ -1.71
HERC2-201ENST00000261609 ADM2Q7Z4H4 148 aa4.37□□□□□ -1.71
HERC2-201ENST00000261609 CRYBG3Q68DQ2 2970 aa4.37□□□□□ -1.71
HERC2-201ENST00000261609 KRTAP25-1Q3LHN0 102 aa4.36□□□□□ -1.71
HERC2-201ENST00000261609 UNC80Q8N2C7 3258 aa4.36□□□□□ -1.71
HERC2-201ENST00000261609 CAMK2N1Q7Z7J9 78 aa4.36□□□□□ -1.71
HERC2-201ENST00000261609 Q6ZR54 194 aa4.36□□□□□ -1.71
HERC2-201ENST00000261609 A8MU10 97 aa4.36□□□□□ -1.71
HERC2-201ENST00000261609 NF1P21359 2839 aa4.35□□□□□ -1.71
HERC2-201ENST00000261609 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
HERC2-201ENST00000261609 ZZEF1O43149 2961 aa4.34□□□□□ -1.71
HERC2-201ENST00000261609 SMR3BP02814 79 aaPredicted RBP4.34□□□□□ -1.71
HERC2-201ENST00000261609 SPRR1BP22528 89 aa4.34□□□□□ -1.71
HERC2-201ENST00000261609 Q6ZSA8 131 aa4.34□□□□□ -1.72
HERC2-201ENST00000261609 NIPBLQ6KC79 2804 aaeCLIP4.34□□□□□ -1.72
HERC2-201ENST00000261609 KRTAP29-1A8MX34 341 aaPredicted RBP4.33□□□□□ -1.72
HERC2-201ENST00000261609 KRTAP26-1Q6PEX3 210 aa4.33□□□□□ -1.72
HERC2-201ENST00000261609 RANBP2P49792 3224 aaKnown RBP4.32□□□□□ -1.72
HERC2-201ENST00000261609 DCHS2Q6V1P9 2916 aa4.32□□□□□ -1.72
HERC2-201ENST00000261609 KRTAP1-3Q8IUG1 177 aa4.31□□□□□ -1.72
HERC2-201ENST00000261609 ZANQ9Y493 2812 aa4.31□□□□□ -1.72
HERC2-201ENST00000261609 CELSR3Q9NYQ7 3312 aa4.3□□□□□ -1.72
HERC2-201ENST00000261609 TNP2Q05952 138 aa4.3□□□□□ -1.72
HERC2-201ENST00000261609 TENM3Q9P273 2699 aa4.29□□□□□ -1.72
HERC2-201ENST00000261609 LAMA1P25391 3075 aa4.29□□□□□ -1.72
HERC2-201ENST00000261609 PLAC8Q9NZF1 115 aa4.29□□□□□ -1.72
HERC2-201ENST00000261609 LCE6AA0A183 80 aa4.28□□□□□ -1.72
HERC2-201ENST00000261609 PDZD2O15018 2839 aa4.28□□□□□ -1.72
HERC2-201ENST00000261609 HTTP42858 3142 aa4.28□□□□□ -1.72
HERC2-201ENST00000261609 KRTAP1-1Q07627 177 aa4.28□□□□□ -1.72
HERC2-201ENST00000261609 DMXL1Q9Y485 3027 aa4.27□□□□□ -1.73
HERC2-201ENST00000261609 A0A087X002 238 aa4.27□□□□□ -1.73
HERC2-201ENST00000261609 MKI67P46013 3256 aaKnown RBP4.27□□□□□ -1.73
HERC2-201ENST00000261609 BOD1L1Q8NFC6 3051 aa4.27□□□□□ -1.73
HERC2-201ENST00000261609 PANO1I0J062 215 aa4.26□□□□□ -1.73
HERC2-201ENST00000261609 CFAP47Q6ZTR5 3102 aa4.26□□□□□ -1.73
HERC2-201ENST00000261609 ADGRG4Q8IZF6 3080 aa4.25□□□□□ -1.73
HERC2-201ENST00000261609 FBN2P35556 2912 aa4.24□□□□□ -1.73
HERC2-201ENST00000261609 TENM1Q9UKZ4 2725 aa4.24□□□□□ -1.73
HERC2-201ENST00000261609 NOTCH2NLQ7Z3S9 236 aa4.22□□□□□ -1.73
HERC2-201ENST00000261609 XIRP2A4UGR9 3374 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 223.8 ms