RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 NUPR2A6NF83 97 aa6.86□□□□□ -1.31
CHRNA1-201ENST00000261007 CASC10Q5T4H9 136 aa6.86□□□□□ -1.31
CHRNA1-201ENST00000261007 H3BPC8 53 aa6.86□□□□□ -1.31
CHRNA1-201ENST00000261007 PSPHP1O15172 72 aa6.86□□□□□ -1.31
CHRNA1-201ENST00000261007 SPANXA2-OT1Q8N9U9 137 aa6.86□□□□□ -1.31
CHRNA1-201ENST00000261007 MDFIQ99750 246 aa6.86□□□□□ -1.31
CHRNA1-201ENST00000261007 CMYA5Q8N3K9 4069 aa6.86□□□□□ -1.31
CHRNA1-201ENST00000261007 CNBPP62633 177 aaKnown RBP6.85□□□□□ -1.31
CHRNA1-201ENST00000261007 RPL37AP8A6NKH3 93 aa6.84□□□□□ -1.32
CHRNA1-201ENST00000261007 MRPL55Q7Z7F7 128 aaKnown RBP6.83□□□□□ -1.32
CHRNA1-201ENST00000261007 COL6A5A8TX70 2615 aa6.83□□□□□ -1.32
CHRNA1-201ENST00000261007 LINC00476Q8WZB0 136 aa6.82□□□□□ -1.32
CHRNA1-201ENST00000261007 C16orf90A8MZG2 172 aa6.82□□□□□ -1.32
CHRNA1-201ENST00000261007 LIMD2Q9BT23 127 aa6.82□□□□□ -1.32
CHRNA1-201ENST00000261007 IGLV8-61A0A075B6I0 122 aa6.81□□□□□ -1.32
CHRNA1-201ENST00000261007 A8MUN3 132 aa6.81□□□□□ -1.32
CHRNA1-201ENST00000261007 PKD1L1Q8TDX9 2849 aa6.81□□□□□ -1.32
CHRNA1-201ENST00000261007 UBE2BP63146 152 aa6.8□□□□□ -1.32
CHRNA1-201ENST00000261007 PRR4Q16378 134 aa6.8□□□□□ -1.32
CHRNA1-201ENST00000261007 Q5VV11 94 aa6.8□□□□□ -1.32
CHRNA1-201ENST00000261007 KRTAP1-5Q9BYS1 174 aa6.8□□□□□ -1.32
CHRNA1-201ENST00000261007 KRTAP29-1A8MX34 341 aaPredicted RBP6.8□□□□□ -1.32
CHRNA1-201ENST00000261007 FAM168BA1KXE4 195 aa6.79□□□□□ -1.32
CHRNA1-201ENST00000261007 UBE2AP49459 152 aa6.79□□□□□ -1.32
CHRNA1-201ENST00000261007 IGFL1Q6UW32 110 aa6.79□□□□□ -1.32
CHRNA1-201ENST00000261007 KRTAP7-1Q8IUC3 87 aa6.79□□□□□ -1.32
CHRNA1-201ENST00000261007 LINC00208Q96KT6 92 aa6.79□□□□□ -1.32
CHRNA1-201ENST00000261007 NOTCH1P46531 2555 aa6.79□□□□□ -1.32
CHRNA1-201ENST00000261007 REG3GQ6UW15 175 aa6.78□□□□□ -1.32
CHRNA1-201ENST00000261007 WFDC13Q8IUB5 93 aa6.78□□□□□ -1.32
CHRNA1-201ENST00000261007 Q8N9P0 234 aaPredicted RBP6.78□□□□□ -1.32
CHRNA1-201ENST00000261007 NBDYA0A0U1RRE5 68 aa6.77□□□□□ -1.33
CHRNA1-201ENST00000261007 H0Y9P7 68 aa6.77□□□□□ -1.33
CHRNA1-201ENST00000261007 CD164Q04900 197 aa6.77□□□□□ -1.33
CHRNA1-201ENST00000261007 ANK2Q01484 3957 aa6.76□□□□□ -1.33
CHRNA1-201ENST00000261007 HUWE1Q7Z6Z7 4374 aaKnown RBP6.76□□□□□ -1.33
CHRNA1-201ENST00000261007 A0A096LNI7 61 aa6.75□□□□□ -1.33
CHRNA1-201ENST00000261007 LCE2BO14633 110 aa6.75□□□□□ -1.33
CHRNA1-201ENST00000261007 CASC2Q6XLA1 102 aa6.75□□□□□ -1.33
CHRNA1-201ENST00000261007 A0A087WSZ3 146 aa6.74□□□□□ -1.33
CHRNA1-201ENST00000261007 C9orf163Q8N9P6 203 aa6.74□□□□□ -1.33
CHRNA1-201ENST00000261007 CHKB-CPT1BH3BT56 60 aa6.73□□□□□ -1.33
CHRNA1-201ENST00000261007 DEFB116Q30KQ4 102 aa6.73□□□□□ -1.33
CHRNA1-201ENST00000261007 IGKV2-24A0A0C4DH68 120 aa6.72□□□□□ -1.33
CHRNA1-201ENST00000261007 LOC101927531A0A1B0GV80 90 aa6.72□□□□□ -1.33
CHRNA1-201ENST00000261007 Q75L30 129 aa6.72□□□□□ -1.33
CHRNA1-201ENST00000261007 MGAM2Q2M2H8 2515 aa6.72□□□□□ -1.33
CHRNA1-201ENST00000261007 NBEAL1Q6ZS30 2694 aa6.72□□□□□ -1.33
CHRNA1-201ENST00000261007 A8MWP4 228 aa6.71□□□□□ -1.33
CHRNA1-201ENST00000261007 ATP11AUNQ6ZP68 121 aa6.71□□□□□ -1.34
CHRNA1-201ENST00000261007 PRR15LQ9BU68 103 aa6.71□□□□□ -1.34
CHRNA1-201ENST00000261007 A0A0G2JQZ4 141 aa6.7□□□□□ -1.34
CHRNA1-201ENST00000261007 A0A1W2PNN7 141 aa6.7□□□□□ -1.34
CHRNA1-201ENST00000261007 H0Y9J4 135 aa6.7□□□□□ -1.34
CHRNA1-201ENST00000261007 RPL37AP61513 92 aaKnown RBP6.7□□□□□ -1.34
CHRNA1-201ENST00000261007 Q6ZRN7 208 aaPredicted RBP6.7□□□□□ -1.34
CHRNA1-201ENST00000261007 IGLV7-46A0A075B6I9 117 aa6.69□□□□□ -1.34
CHRNA1-201ENST00000261007 KTN1-AS1Q86SY8 53 aa6.69□□□□□ -1.34
CHRNA1-201ENST00000261007 SPRR1BP22528 89 aa6.69□□□□□ -1.34
CHRNA1-201ENST00000261007 LINC00472Q9H8W2 130 aa6.69□□□□□ -1.34
CHRNA1-201ENST00000261007 A8MU10 97 aa6.68□□□□□ -1.34
CHRNA1-201ENST00000261007 NDUFS5O43920 106 aa6.67□□□□□ -1.34
CHRNA1-201ENST00000261007 COA5Q86WW8 74 aa6.67□□□□□ -1.34
CHRNA1-201ENST00000261007 LCA10Q71F78 164 aa6.66□□□□□ -1.34
CHRNA1-201ENST00000261007 DNAH1Q9P2D7 4330 aa6.65□□□□□ -1.34
CHRNA1-201ENST00000261007 PRLHP81277 87 aa6.65□□□□□ -1.34
CHRNA1-201ENST00000261007 PHF5AQ7RTV0 110 aaKnown RBP6.64□□□□□ -1.35
CHRNA1-201ENST00000261007 MMP24-AS1A0A0U1RRL7 71 aa6.64□□□□□ -1.35
CHRNA1-201ENST00000261007 A6NED7 52 aa6.64□□□□□ -1.35
CHRNA1-201ENST00000261007 CHTF8P0CG12 524 aa6.64□□□□□ -1.35
CHRNA1-201ENST00000261007 TP53AIP1Q9HCN2 124 aa6.64□□□□□ -1.35
CHRNA1-201ENST00000261007 CDC42SE1Q9NRR8 79 aa6.64□□□□□ -1.35
CHRNA1-201ENST00000261007 LINC01558Q9Y6Z2 57 aa6.63□□□□□ -1.35
CHRNA1-201ENST00000261007 DNAH9Q9NYC9 4486 aa6.63□□□□□ -1.35
CHRNA1-201ENST00000261007 A0A087WTM6 91 aa6.62□□□□□ -1.35
CHRNA1-201ENST00000261007 A6NN06 94 aa6.62□□□□□ -1.35
CHRNA1-201ENST00000261007 PLAC8Q9NZF1 115 aa6.62□□□□□ -1.35
CHRNA1-201ENST00000261007 STAB2Q8WWQ8 2551 aa6.62□□□□□ -1.35
CHRNA1-201ENST00000261007 Q6ZR54 194 aa6.62□□□□□ -1.35
CHRNA1-201ENST00000261007 ASB16-AS1Q495Z4 193 aa6.61□□□□□ -1.35
CHRNA1-201ENST00000261007 SPTSSBQ8NFR3 76 aa6.61□□□□□ -1.35
CHRNA1-201ENST00000261007 SPACA4Q8TDM5 124 aa6.61□□□□□ -1.35
CHRNA1-201ENST00000261007 DYNC2H1Q8NCM8 4307 aaKnown RBP6.59□□□□□ -1.36
CHRNA1-201ENST00000261007 MOBPQ13875 183 aa6.58□□□□□ -1.36
CHRNA1-201ENST00000261007 RBM12B-AS1Q9P1G2 102 aa6.58□□□□□ -1.36
CHRNA1-201ENST00000261007 RTL8CO15255 209 aa6.57□□□□□ -1.36
CHRNA1-201ENST00000261007 C1orf134Q5TEV5 83 aa6.57□□□□□ -1.36
CHRNA1-201ENST00000261007 KRTAP13-1Q8IUC0 172 aa6.57□□□□□ -1.36
CHRNA1-201ENST00000261007 KRTAP11-1Q8IUC1 163 aa6.57□□□□□ -1.36
CHRNA1-201ENST00000261007 KRTAP21-3Q3LHN1 58 aa6.56□□□□□ -1.36
CHRNA1-201ENST00000261007 COL7A1Q02388 2944 aa6.55□□□□□ -1.36
CHRNA1-201ENST00000261007 ZNF706Q9Y5V0 76 aaPredicted RBP6.55□□□□□ -1.36
CHRNA1-201ENST00000261007 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.55□□□□□ -1.36
CHRNA1-201ENST00000261007 PANO1I0J062 215 aa6.54□□□□□ -1.36
CHRNA1-201ENST00000261007 PCOTHQ58A44 107 aa6.54□□□□□ -1.36
CHRNA1-201ENST00000261007 C7orf65Q6ZTY9 151 aa6.54□□□□□ -1.36
CHRNA1-201ENST00000261007 SPAG11AQ6PDA7 123 aa6.53□□□□□ -1.36
CHRNA1-201ENST00000261007 Q96NJ1 140 aa6.53□□□□□ -1.36
CHRNA1-201ENST00000261007 C8orf17Q9NRJ1 99 aa6.53□□□□□ -1.36
CHRNA1-201ENST00000261007 IGLV5-52A0A0A0MRZ9 124 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms