RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 KRTAP1-5Q9BYS1 174 aa4.03□□□□□ -1.76
BRIP1-201ENST00000259008 TMEM254Q8TBM7 123 aa4.02□□□□□ -1.77
BRIP1-201ENST00000259008 LITAFQ99732 161 aa4.02□□□□□ -1.77
BRIP1-201ENST00000259008 NDUFC1O43677 76 aa4.02□□□□□ -1.77
BRIP1-201ENST00000259008 CXCL6P80162 114 aa4.02□□□□□ -1.77
BRIP1-201ENST00000259008 KRTAP21-3Q3LHN1 58 aa4.02□□□□□ -1.77
BRIP1-201ENST00000259008 TRBV7-4A0A0J9YYF1 115 aa4.01□□□□□ -1.77
BRIP1-201ENST00000259008 A8MWP4 228 aa4.01□□□□□ -1.77
BRIP1-201ENST00000259008 MRPL34Q9BQ48 92 aaKnown RBP4.01□□□□□ -1.77
BRIP1-201ENST00000259008 IMUPQ9GZP8 106 aa4.01□□□□□ -1.77
BRIP1-201ENST00000259008 CSMD1Q96PZ7 3565 aa4.01□□□□□ -1.77
BRIP1-201ENST00000259008 EIF4EBP3O60516 100 aaPredicted RBP4□□□□□ -1.77
BRIP1-201ENST00000259008 Q8N377 158 aa4□□□□□ -1.77
BRIP1-201ENST00000259008 K7EQZ3 153 aa4□□□□□ -1.77
BRIP1-201ENST00000259008 CENPEQ02224 2701 aa4□□□□□ -1.77
BRIP1-201ENST00000259008 FAM240AA0A1B0GVK7 77 aa4□□□□□ -1.77
BRIP1-201ENST00000259008 IGLV8-61A0A075B6I0 122 aa3.99□□□□□ -1.77
BRIP1-201ENST00000259008 COX7CP15954 63 aa3.99□□□□□ -1.77
BRIP1-201ENST00000259008 PLAC8Q9NZF1 115 aa3.99□□□□□ -1.77
BRIP1-201ENST00000259008 LOC110117498A0A087WWA1 95 aa3.99□□□□□ -1.77
BRIP1-201ENST00000259008 ATP5EP56381 51 aaPredicted RBP3.99□□□□□ -1.77
BRIP1-201ENST00000259008 ACYP2P14621 99 aa3.99□□□□□ -1.77
BRIP1-201ENST00000259008 V9GYY9 64 aa3.98□□□□□ -1.77
BRIP1-201ENST00000259008 ZFHX3Q15911 3703 aa3.98□□□□□ -1.77
BRIP1-201ENST00000259008 TRAV22A0A0B4J277 110 aa3.98□□□□□ -1.77
BRIP1-201ENST00000259008 A0A1B0GVX0 72 aa3.98□□□□□ -1.77
BRIP1-201ENST00000259008 CCDC179H3BU77 68 aa3.98□□□□□ -1.77
BRIP1-201ENST00000259008 C8orf17Q9NRJ1 99 aa3.98□□□□□ -1.77
BRIP1-201ENST00000259008 CSMD2Q7Z408 3487 aa3.97□□□□□ -1.77
BRIP1-201ENST00000259008 A0A1B0GW54 56 aa3.96□□□□□ -1.78
BRIP1-201ENST00000259008 LINC01554Q52M75 96 aa3.95□□□□□ -1.78
BRIP1-201ENST00000259008 A0A1B0GU69 56 aa3.95□□□□□ -1.78
BRIP1-201ENST00000259008 TEX15Q9BXT5 2789 aa3.95□□□□□ -1.78
BRIP1-201ENST00000259008 A0A0U1RQV1 116 aa3.94□□□□□ -1.78
BRIP1-201ENST00000259008 UTP20O75691 2785 aaKnown RBP3.94□□□□□ -1.78
BRIP1-201ENST00000259008 ZANQ9Y493 2812 aa3.94□□□□□ -1.78
BRIP1-201ENST00000259008 PSPHP1O15172 72 aa3.94□□□□□ -1.78
BRIP1-201ENST00000259008 SETXQ7Z333 2677 aaKnown RBP3.93□□□□□ -1.78
BRIP1-201ENST00000259008 MXRA5Q9NR99 2828 aa3.93□□□□□ -1.78
BRIP1-201ENST00000259008 LOC101927531A0A1B0GV80 90 aa3.93□□□□□ -1.78
BRIP1-201ENST00000259008 Q8N1X5 172 aa3.93□□□□□ -1.78
BRIP1-201ENST00000259008 FBN2P35556 2912 aa3.92□□□□□ -1.78
BRIP1-201ENST00000259008 GCN1Q92616 2671 aaKnown RBP3.92□□□□□ -1.78
BRIP1-201ENST00000259008 PRR15Q8IV56 129 aa3.92□□□□□ -1.78
BRIP1-201ENST00000259008 SMCPP49901 116 aaPredicted RBP3.92□□□□□ -1.78
BRIP1-201ENST00000259008 UBR5O95071 2799 aaPredicted RBP3.91□□□□□ -1.78
BRIP1-201ENST00000259008 FAM229BQ4G0N7 80 aa3.91□□□□□ -1.78
BRIP1-201ENST00000259008 Q6ZR54 194 aa3.91□□□□□ -1.78
BRIP1-201ENST00000259008 UNC79Q9P2D8 2635 aa3.91□□□□□ -1.78
BRIP1-201ENST00000259008 ZNF469Q96JG9 3925 aaPredicted RBP3.91□□□□□ -1.78
BRIP1-201ENST00000259008 IGLV5-48A0A075B6I7 105 aa3.9□□□□□ -1.78
BRIP1-201ENST00000259008 CUBNO60494 3623 aa3.9□□□□□ -1.79
BRIP1-201ENST00000259008 SEC61BP60468 96 aaKnown RBP3.89□□□□□ -1.79
BRIP1-201ENST00000259008 PANO1I0J062 215 aa3.88□□□□□ -1.79
BRIP1-201ENST00000259008 CD164Q04900 197 aa3.88□□□□□ -1.79
BRIP1-201ENST00000259008 COL6A5A8TX70 2615 aa3.88□□□□□ -1.79
BRIP1-201ENST00000259008 OXTP01178 125 aa3.88□□□□□ -1.79
BRIP1-201ENST00000259008 A0A1W2PNM2 257 aa3.88□□□□□ -1.79
BRIP1-201ENST00000259008 TENM4Q6N022 2769 aa3.87□□□□□ -1.79
BRIP1-201ENST00000259008 CHD6Q8TD26 2715 aa3.86□□□□□ -1.79
BRIP1-201ENST00000259008 H3BPC8 53 aa3.86□□□□□ -1.79
BRIP1-201ENST00000259008 FAM104AQ969W3 186 aa3.86□□□□□ -1.79
BRIP1-201ENST00000259008 ITPR2Q14571 2701 aa3.85□□□□□ -1.79
BRIP1-201ENST00000259008 NIPBLQ6KC79 2804 aaeCLIP3.85□□□□□ -1.79
BRIP1-201ENST00000259008 A0A0D9SG42 100 aa3.85□□□□□ -1.79
BRIP1-201ENST00000259008 NF1P21359 2839 aa3.84□□□□□ -1.79
BRIP1-201ENST00000259008 KMT2BQ9UMN6 2715 aaPredicted RBP3.84□□□□□ -1.79
BRIP1-201ENST00000259008 Q8NDZ9 215 aa3.84□□□□□ -1.79
BRIP1-201ENST00000259008 PRO0461Q9UI25 63 aa3.84□□□□□ -1.79
BRIP1-201ENST00000259008 KRTAP26-1Q6PEX3 210 aa3.84□□□□□ -1.8
BRIP1-201ENST00000259008 SMIM26A0A096LP01 95 aa3.83□□□□□ -1.8
BRIP1-201ENST00000259008 NBPF19A0A087WUL8 3843 aa3.83□□□□□ -1.8
BRIP1-201ENST00000259008 C4orf26Q17RF5 130 aa3.82□□□□□ -1.8
BRIP1-201ENST00000259008 APCP25054 2843 aa3.82□□□□□ -1.8
BRIP1-201ENST00000259008 SPINT4Q6UDR6 99 aa3.82□□□□□ -1.8
BRIP1-201ENST00000259008 LINC01600Q96MT4 127 aa3.82□□□□□ -1.8
BRIP1-201ENST00000259008 COA5Q86WW8 74 aa3.81□□□□□ -1.8
BRIP1-201ENST00000259008 S4R3F8 94 aa3.8□□□□□ -1.8
BRIP1-201ENST00000259008 ZCCHC13Q8WW36 166 aaKnown RBP3.8□□□□□ -1.8
BRIP1-201ENST00000259008 Q6ZRN7 208 aaPredicted RBP3.79□□□□□ -1.8
BRIP1-201ENST00000259008 STAB1Q9NY15 2570 aa3.79□□□□□ -1.8
BRIP1-201ENST00000259008 A0A087X002 238 aa3.79□□□□□ -1.8
BRIP1-201ENST00000259008 PDZD2O15018 2839 aa3.78□□□□□ -1.8
BRIP1-201ENST00000259008 PMAIP1Q13794 54 aa3.78□□□□□ -1.8
BRIP1-201ENST00000259008 OTOGQ6ZRI0 2925 aa3.77□□□□□ -1.81
BRIP1-201ENST00000259008 AKAP9Q99996 3911 aa3.77□□□□□ -1.81
BRIP1-201ENST00000259008 SPRR1AP35321 89 aa3.77□□□□□ -1.81
BRIP1-201ENST00000259008 HIVEP1P15822 2718 aa3.77□□□□□ -1.81
BRIP1-201ENST00000259008 FP248Q71RG6 208 aaPredicted RBP3.76□□□□□ -1.81
BRIP1-201ENST00000259008 CAMK2N1Q7Z7J9 78 aa3.76□□□□□ -1.81
BRIP1-201ENST00000259008 SPINK7P58062 85 aa3.75□□□□□ -1.81
BRIP1-201ENST00000259008 C1orf195Q5TG92 126 aa3.75□□□□□ -1.81
BRIP1-201ENST00000259008 CSAG1Q6PB30 78 aa3.75□□□□□ -1.81
BRIP1-201ENST00000259008 NOTCH1P46531 2555 aa3.73□□□□□ -1.81
BRIP1-201ENST00000259008 LINC00483Q53H64 154 aa3.73□□□□□ -1.81
BRIP1-201ENST00000259008 KRTAP11-1Q8IUC1 163 aa3.73□□□□□ -1.81
BRIP1-201ENST00000259008 HRES1P13985 223 aa3.72□□□□□ -1.81
BRIP1-201ENST00000259008 VWFP04275 2813 aa3.71□□□□□ -1.82
BRIP1-201ENST00000259008 SPRR1BP22528 89 aa3.71□□□□□ -1.82
BRIP1-201ENST00000259008 MMP24-AS1A0A0U1RRL7 71 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms