RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 K7EQZ3 153 aa3.08□□□□□ -1.92
USP44-201ENST00000258499 DNAH10OSP0CZ25 163 aa3.08□□□□□ -1.92
USP44-201ENST00000258499 LINC00476Q8WZB0 136 aa3.08□□□□□ -1.92
USP44-201ENST00000258499 LINC00208Q96KT6 92 aa3.08□□□□□ -1.92
USP44-201ENST00000258499 KRTAP4-5Q9BYR2 181 aa3.08□□□□□ -1.92
USP44-201ENST00000258499 IGLV1-50A0A075B6I6 118 aa3.08□□□□□ -1.92
USP44-201ENST00000258499 CDK2AP2O75956 126 aa3.08□□□□□ -1.92
USP44-201ENST00000258499 CHTF8P0CG12 524 aa3.08□□□□□ -1.92
USP44-201ENST00000258499 Q9BRP9 147 aa3.08□□□□□ -1.92
USP44-201ENST00000258499 STAB2Q8WWQ8 2551 aa3.07□□□□□ -1.92
USP44-201ENST00000258499 RPL37AP61513 92 aaKnown RBP3.07□□□□□ -1.92
USP44-201ENST00000258499 IGLV9-49A0A0B4J1Y8 123 aa3.07□□□□□ -1.92
USP44-201ENST00000258499 HCG22E2RYF7 251 aa3.07□□□□□ -1.92
USP44-201ENST00000258499 LINC00336Q6ZUF6 198 aa3.07□□□□□ -1.92
USP44-201ENST00000258499 PSPHP1O15172 72 aa3.06□□□□□ -1.92
USP44-201ENST00000258499 NDUFB1O75438 58 aa3.06□□□□□ -1.92
USP44-201ENST00000258499 B9D2Q9BPU9 175 aa3.06□□□□□ -1.92
USP44-201ENST00000258499 KRTAP26-1Q6PEX3 210 aa3.06□□□□□ -1.92
USP44-201ENST00000258499 PHF5AQ7RTV0 110 aaKnown RBP3.06□□□□□ -1.92
USP44-201ENST00000258499 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
USP44-201ENST00000258499 Q5XG85 94 aa3.05□□□□□ -1.92
USP44-201ENST00000258499 KRTAP9-8Q9BYQ0 159 aa3.05□□□□□ -1.92
USP44-201ENST00000258499 KMT2BQ9UMN6 2715 aaPredicted RBP3.05□□□□□ -1.92
USP44-201ENST00000258499 TRRAPQ9Y4A5 3859 aa3.05□□□□□ -1.92
USP44-201ENST00000258499 IGLV5-48A0A075B6I7 105 aa3.05□□□□□ -1.92
USP44-201ENST00000258499 OCR1Q9BZK8 76 aa3.05□□□□□ -1.92
USP44-201ENST00000258499 C14orf177Q52M58 125 aa3.04□□□□□ -1.92
USP44-201ENST00000258499 CASC2Q6XLA1 102 aa3.04□□□□□ -1.92
USP44-201ENST00000258499 IGFL1Q6UW32 110 aa3.04□□□□□ -1.92
USP44-201ENST00000258499 PRO0628Q9UI54 55 aa3.03□□□□□ -1.92
USP44-201ENST00000258499 EPM2AB3EWF7 344 aa3.03□□□□□ -1.92
USP44-201ENST00000258499 SPINK6Q6UWN8 80 aa3.03□□□□□ -1.92
USP44-201ENST00000258499 H0Y9P7 68 aa3.03□□□□□ -1.92
USP44-201ENST00000258499 TLX1NBP0CAT3 122 aa3.03□□□□□ -1.92
USP44-201ENST00000258499 PCOTHQ58A44 107 aa3.03□□□□□ -1.92
USP44-201ENST00000258499 C16orf90A8MZG2 172 aa3.03□□□□□ -1.93
USP44-201ENST00000258499 FP248Q71RG6 208 aaPredicted RBP3.03□□□□□ -1.93
USP44-201ENST00000258499 K7EIL1 84 aa3.02□□□□□ -1.93
USP44-201ENST00000258499 DSCR10P59022 87 aa3.02□□□□□ -1.93
USP44-201ENST00000258499 FAM229BQ4G0N7 80 aa3.02□□□□□ -1.93
USP44-201ENST00000258499 A0A1B0GW54 56 aa3.02□□□□□ -1.93
USP44-201ENST00000258499 C1orf64Q8NEQ6 169 aa3.02□□□□□ -1.93
USP44-201ENST00000258499 SPTSSBQ8NFR3 76 aa3.01□□□□□ -1.93
USP44-201ENST00000258499 PLA2G2DQ9UNK4 145 aa3.01□□□□□ -1.93
USP44-201ENST00000258499 IGHV6-1A0A0B4J1U7 121 aa3.01□□□□□ -1.93
USP44-201ENST00000258499 C1orf195Q5TG92 126 aa3.01□□□□□ -1.93
USP44-201ENST00000258499 AKAP9Q99996 3911 aa3□□□□□ -1.93
USP44-201ENST00000258499 CHKB-CPT1BH3BT56 60 aa3□□□□□ -1.93
USP44-201ENST00000258499 SPRR1AP35321 89 aa3□□□□□ -1.93
USP44-201ENST00000258499 SPRR4Q96PI1 79 aa3□□□□□ -1.93
USP44-201ENST00000258499 IGLV5-37A0A075B6J1 123 aa2.99□□□□□ -1.93
USP44-201ENST00000258499 KRTAP1-5Q9BYS1 174 aa2.99□□□□□ -1.93
USP44-201ENST00000258499 MDFIQ99750 246 aa2.99□□□□□ -1.93
USP44-201ENST00000258499 PRR15LQ9BU68 103 aa2.99□□□□□ -1.93
USP44-201ENST00000258499 KRTAP4-16G5E9R7 235 aaPredicted RBP2.98□□□□□ -1.93
USP44-201ENST00000258499 KRTAP7-1Q8IUC3 87 aa2.98□□□□□ -1.93
USP44-201ENST00000258499 hDV103S1A0JD37 113 aa2.98□□□□□ -1.93
USP44-201ENST00000258499 A8MUN3 132 aa2.98□□□□□ -1.93
USP44-201ENST00000258499 ANAPC11Q9NYG5 84 aa2.98□□□□□ -1.93
USP44-201ENST00000258499 A6NED7 52 aa2.98□□□□□ -1.93
USP44-201ENST00000258499 TNP2Q05952 138 aa2.98□□□□□ -1.93
USP44-201ENST00000258499 MOBPQ13875 183 aa2.98□□□□□ -1.93
USP44-201ENST00000258499 PRR15Q8IV56 129 aa2.98□□□□□ -1.93
USP44-201ENST00000258499 ANK3Q12955 4377 aaKnown RBP2.97□□□□□ -1.93
USP44-201ENST00000258499 TENM2Q9NT68 2774 aa2.97□□□□□ -1.93
USP44-201ENST00000258499 A8MWP4 228 aa2.97□□□□□ -1.93
USP44-201ENST00000258499 CIRBP-AS1Q8TBR5 109 aa2.97□□□□□ -1.93
USP44-201ENST00000258499 TRAV22A0A0B4J277 110 aa2.97□□□□□ -1.93
USP44-201ENST00000258499 V9GYY9 64 aa2.97□□□□□ -1.93
USP44-201ENST00000258499 NBDYA0A0U1RRE5 68 aa2.96□□□□□ -1.93
USP44-201ENST00000258499 SEC61GP60059 68 aa2.96□□□□□ -1.93
USP44-201ENST00000258499 PMAIP1Q13794 54 aa2.96□□□□□ -1.94
USP44-201ENST00000258499 C9orf163Q8N9P6 203 aa2.96□□□□□ -1.94
USP44-201ENST00000258499 RETNLBQ9BQ08 111 aa2.96□□□□□ -1.94
USP44-201ENST00000258499 CNBPP62633 177 aaKnown RBP2.96□□□□□ -1.94
USP44-201ENST00000258499 NUPR2A6NF83 97 aa2.95□□□□□ -1.94
USP44-201ENST00000258499 ZNF706Q9Y5V0 76 aaPredicted RBP2.95□□□□□ -1.94
USP44-201ENST00000258499 LY6G6CO95867 125 aa2.95□□□□□ -1.94
USP44-201ENST00000258499 SPAG11AQ6PDA7 123 aa2.95□□□□□ -1.94
USP44-201ENST00000258499 KRTAP11-1Q8IUC1 163 aa2.94□□□□□ -1.94
USP44-201ENST00000258499 SRRM2Q9UQ35 2752 aaKnown RBP2.94□□□□□ -1.94
USP44-201ENST00000258499 IGLV5-52A0A0A0MRZ9 124 aa2.94□□□□□ -1.94
USP44-201ENST00000258499 APLNQ9ULZ1 77 aa2.94□□□□□ -1.94
USP44-201ENST00000258499 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.93□□□□□ -1.94
USP44-201ENST00000258499 PANO1I0J062 215 aa2.93□□□□□ -1.94
USP44-201ENST00000258499 RTL8CO15255 209 aa2.93□□□□□ -1.94
USP44-201ENST00000258499 COA5Q86WW8 74 aa2.93□□□□□ -1.94
USP44-201ENST00000258499 H3BPC8 53 aa2.92□□□□□ -1.94
USP44-201ENST00000258499 LIMD2Q9BT23 127 aa2.92□□□□□ -1.94
USP44-201ENST00000258499 C8orf17Q9NRJ1 99 aa2.92□□□□□ -1.94
USP44-201ENST00000258499 LINC00472Q9H8W2 130 aa2.91□□□□□ -1.94
USP44-201ENST00000258499 PSORS1C2Q9UIG4 136 aa2.91□□□□□ -1.94
USP44-201ENST00000258499 TP53AIP1Q9HCN2 124 aa2.91□□□□□ -1.94
USP44-201ENST00000258499 ZCCHC13Q8WW36 166 aaKnown RBP2.91□□□□□ -1.94
USP44-201ENST00000258499 IGLV8-61A0A075B6I0 122 aa2.9□□□□□ -1.94
USP44-201ENST00000258499 A0A087WTM6 91 aa2.9□□□□□ -1.94
USP44-201ENST00000258499 CYP4F30PQ9H0H9 118 aa2.9□□□□□ -1.94
USP44-201ENST00000258499 MMP24-AS1A0A0U1RRL7 71 aa2.9□□□□□ -1.94
USP44-201ENST00000258499 Q1T7F1 81 aa2.9□□□□□ -1.94
USP44-201ENST00000258499 C1orf134Q5TEV5 83 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms