RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 A0A087WSZ3 146 aa7.29□□□□□ -1.24
TROAP-201ENST00000257909 NOTCH2Q04721 2471 aa7.29□□□□□ -1.24
TROAP-201ENST00000257909 DNAH10OSP0CZ25 163 aa7.28□□□□□ -1.24
TROAP-201ENST00000257909 CASC2Q6XLA1 102 aa7.28□□□□□ -1.24
TROAP-201ENST00000257909 A0A0G2JQZ4 141 aa7.27□□□□□ -1.25
TROAP-201ENST00000257909 A0A1W2PNN7 141 aa7.27□□□□□ -1.25
TROAP-201ENST00000257909 A8MU10 97 aa7.26□□□□□ -1.25
TROAP-201ENST00000257909 PRR15LQ9BU68 103 aa7.26□□□□□ -1.25
TROAP-201ENST00000257909 NSD1Q96L73 2696 aaPredicted RBP7.25□□□□□ -1.25
TROAP-201ENST00000257909 C16orf90A8MZG2 172 aa7.25□□□□□ -1.25
TROAP-201ENST00000257909 RPL37AP61513 92 aaKnown RBP7.25□□□□□ -1.25
TROAP-201ENST00000257909 C9orf163Q8N9P6 203 aa7.25□□□□□ -1.25
TROAP-201ENST00000257909 Q75L30 129 aa7.25□□□□□ -1.25
TROAP-201ENST00000257909 NDUFS5O43920 106 aa7.24□□□□□ -1.25
TROAP-201ENST00000257909 ATRQ13535 2644 aa7.24□□□□□ -1.25
TROAP-201ENST00000257909 DEFB131BA0A096LNP1 70 aa7.24□□□□□ -1.25
TROAP-201ENST00000257909 ATP11AUNQ6ZP68 121 aa7.24□□□□□ -1.25
TROAP-201ENST00000257909 LOC101927531A0A1B0GV80 90 aa7.23□□□□□ -1.25
TROAP-201ENST00000257909 A8MWP4 228 aa7.23□□□□□ -1.25
TROAP-201ENST00000257909 CNBPP62633 177 aaKnown RBP7.23□□□□□ -1.25
TROAP-201ENST00000257909 TEP1Q99973 2627 aaKnown RBP7.23□□□□□ -1.25
TROAP-201ENST00000257909 ANK2Q01484 3957 aa7.23□□□□□ -1.25
TROAP-201ENST00000257909 TENM3Q9P273 2699 aa7.21□□□□□ -1.26
TROAP-201ENST00000257909 INAFM1C9JVW0 142 aa7.21□□□□□ -1.26
TROAP-201ENST00000257909 COA5Q86WW8 74 aa7.21□□□□□ -1.26
TROAP-201ENST00000257909 KMT2BQ9UMN6 2715 aaPredicted RBP7.2□□□□□ -1.26
TROAP-201ENST00000257909 IGLV7-46A0A075B6I9 117 aa7.2□□□□□ -1.26
TROAP-201ENST00000257909 CASC10Q5T4H9 136 aa7.2□□□□□ -1.26
TROAP-201ENST00000257909 A6NED7 52 aa7.2□□□□□ -1.26
TROAP-201ENST00000257909 PRLHP81277 87 aa7.2□□□□□ -1.26
TROAP-201ENST00000257909 SPTSSBQ8NFR3 76 aa7.2□□□□□ -1.26
TROAP-201ENST00000257909 LCA10Q71F78 164 aa7.19□□□□□ -1.26
TROAP-201ENST00000257909 LINC00472Q9H8W2 130 aa7.19□□□□□ -1.26
TROAP-201ENST00000257909 CMYA5Q8N3K9 4069 aa7.19□□□□□ -1.26
TROAP-201ENST00000257909 DNAH1Q9P2D7 4330 aa7.19□□□□□ -1.26
TROAP-201ENST00000257909 PHF5AQ7RTV0 110 aaKnown RBP7.18□□□□□ -1.26
TROAP-201ENST00000257909 C8orf87E5RJ46 101 aa7.17□□□□□ -1.26
TROAP-201ENST00000257909 HECTD1Q9ULT8 2610 aa7.17□□□□□ -1.26
TROAP-201ENST00000257909 A6NN06 94 aa7.17□□□□□ -1.26
TROAP-201ENST00000257909 CDC42SE1Q9NRR8 79 aa7.17□□□□□ -1.26
TROAP-201ENST00000257909 H3BS24 57 aa7.16□□□□□ -1.26
TROAP-201ENST00000257909 SPRR1BP22528 89 aa7.16□□□□□ -1.26
TROAP-201ENST00000257909 MMP24-AS1A0A0U1RRL7 71 aa7.14□□□□□ -1.27
TROAP-201ENST00000257909 J3QKU1 62 aa7.14□□□□□ -1.27
TROAP-201ENST00000257909 H0Y9J4 135 aa7.13□□□□□ -1.27
TROAP-201ENST00000257909 TP53AIP1Q9HCN2 124 aa7.13□□□□□ -1.27
TROAP-201ENST00000257909 LINC01558Q9Y6Z2 57 aa7.13□□□□□ -1.27
TROAP-201ENST00000257909 BAHCC1Q9P281 2608 aa7.13□□□□□ -1.27
TROAP-201ENST00000257909 F8P00451 2351 aa7.13□□□□□ -1.27
TROAP-201ENST00000257909 C7orf65Q6ZTY9 151 aa7.12□□□□□ -1.27
TROAP-201ENST00000257909 A0A096LNI7 61 aa7.12□□□□□ -1.27
TROAP-201ENST00000257909 KRTAP10-11P60412 298 aa7.12□□□□□ -1.27
TROAP-201ENST00000257909 DNAH3Q8TD57 4116 aa7.11□□□□□ -1.27
TROAP-201ENST00000257909 PLAC8Q9NZF1 115 aa7.1□□□□□ -1.27
TROAP-201ENST00000257909 IGKV2-24A0A0C4DH68 120 aa7.1□□□□□ -1.27
TROAP-201ENST00000257909 PCOTHQ58A44 107 aa7.09□□□□□ -1.27
TROAP-201ENST00000257909 MOBPQ13875 183 aa7.08□□□□□ -1.28
TROAP-201ENST00000257909 ASB16-AS1Q495Z4 193 aa7.08□□□□□ -1.28
TROAP-201ENST00000257909 SPAG11AQ6PDA7 123 aa7.08□□□□□ -1.28
TROAP-201ENST00000257909 Q6ZR54 194 aa7.08□□□□□ -1.28
TROAP-201ENST00000257909 DNAH10Q8IVF4 4471 aa7.06□□□□□ -1.28
TROAP-201ENST00000257909 FLNBO75369 2602 aaKnown RBP7.03□□□□□ -1.28
TROAP-201ENST00000257909 KRTAP11-1Q8IUC1 163 aa7.03□□□□□ -1.28
TROAP-201ENST00000257909 C8orf17Q9NRJ1 99 aa7.02□□□□□ -1.29
TROAP-201ENST00000257909 HUWE1Q7Z6Z7 4374 aaKnown RBP7.02□□□□□ -1.29
TROAP-201ENST00000257909 HRES1P13985 223 aa7.02□□□□□ -1.29
TROAP-201ENST00000257909 Q96NJ1 140 aa7.02□□□□□ -1.29
TROAP-201ENST00000257909 DNAH9Q9NYC9 4486 aa7□□□□□ -1.29
TROAP-201ENST00000257909 SPINK7P58062 85 aa7□□□□□ -1.29
TROAP-201ENST00000257909 C14orf177Q52M58 125 aa6.98□□□□□ -1.29
TROAP-201ENST00000257909 LYSTQ99698 3801 aa6.98□□□□□ -1.29
TROAP-201ENST00000257909 STAB1Q9NY15 2570 aa6.98□□□□□ -1.29
TROAP-201ENST00000257909 TENM2Q9NT68 2774 aa6.98□□□□□ -1.29
TROAP-201ENST00000257909 A0A1B0GVX0 72 aa6.98□□□□□ -1.29
TROAP-201ENST00000257909 CHTF8P0CG12 524 aa6.97□□□□□ -1.29
TROAP-201ENST00000257909 FBN1P35555 2871 aaKnown RBP6.97□□□□□ -1.29
TROAP-201ENST00000257909 MRPL34Q9BQ48 92 aaKnown RBP6.97□□□□□ -1.29
TROAP-201ENST00000257909 MAST4O15021 2626 aa6.96□□□□□ -1.29
TROAP-201ENST00000257909 IGHV6-1A0A0B4J1U7 121 aa6.96□□□□□ -1.3
TROAP-201ENST00000257909 CDK2AP2O75956 126 aa6.96□□□□□ -1.3
TROAP-201ENST00000257909 PRR26Q8N8Z3 221 aa6.96□□□□□ -1.3
TROAP-201ENST00000257909 KRTAP13-1Q8IUC0 172 aa6.95□□□□□ -1.3
TROAP-201ENST00000257909 NOTCH1P46531 2555 aa6.95□□□□□ -1.3
TROAP-201ENST00000257909 SRRM2Q9UQ35 2752 aaKnown RBP6.95□□□□□ -1.3
TROAP-201ENST00000257909 IGLV9-49A0A0B4J1Y8 123 aa6.94□□□□□ -1.3
TROAP-201ENST00000257909 KRTAP1-5Q9BYS1 174 aa6.93□□□□□ -1.3
TROAP-201ENST00000257909 KRTAP24-1Q3LI83 254 aa6.92□□□□□ -1.3
TROAP-201ENST00000257909 MDFIQ99750 246 aa6.91□□□□□ -1.3
TROAP-201ENST00000257909 LINC00483Q53H64 154 aa6.9□□□□□ -1.3
TROAP-201ENST00000257909 LINC01554Q52M75 96 aa6.9□□□□□ -1.31
TROAP-201ENST00000257909 ACYP2P14621 99 aa6.89□□□□□ -1.31
TROAP-201ENST00000257909 LINC00313P59037 77 aa6.89□□□□□ -1.31
TROAP-201ENST00000257909 PRAC1Q96KF2 57 aa6.87□□□□□ -1.31
TROAP-201ENST00000257909 ZNF706Q9Y5V0 76 aaPredicted RBP6.87□□□□□ -1.31
TROAP-201ENST00000257909 NBEAL1Q6ZS30 2694 aa6.87□□□□□ -1.31
TROAP-201ENST00000257909 A0A087X002 238 aa6.85□□□□□ -1.31
TROAP-201ENST00000257909 NOTCH2NLQ7Z3S9 236 aa6.85□□□□□ -1.31
TROAP-201ENST00000257909 UBE2DNLQ8IWF7 75 aa6.85□□□□□ -1.31
TROAP-201ENST00000257909 DNAH7Q8WXX0 4024 aa6.85□□□□□ -1.31
TROAP-201ENST00000257909 COL6A5A8TX70 2615 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms