RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 A0A1B0GU33 70 aa12.15□□□□□ -0.46
SOX4-201ENST00000244745 CSAG1Q6PB30 78 aa12.14□□□□□ -0.47
SOX4-201ENST00000244745 FLNAP21333 2647 aaKnown RBP12.13□□□□□ -0.47
SOX4-201ENST00000244745 DNAH14Q0VDD8 3507 aa12.12□□□□□ -0.47
SOX4-201ENST00000244745 MGAQ8IWI9 3026 aa12.11□□□□□ -0.47
SOX4-201ENST00000244745 SPRR1BP22528 89 aa12.09□□□□□ -0.47
SOX4-201ENST00000244745 PLAC8Q9NZF1 115 aa12.09□□□□□ -0.47
SOX4-201ENST00000244745 PRUNE2Q8WUY3 3088 aa12.07□□□□□ -0.48
SOX4-201ENST00000244745 KRTAP1-5Q9BYS1 174 aa12.07□□□□□ -0.48
SOX4-201ENST00000244745 XIRP2A4UGR9 3374 aa12.05□□□□□ -0.48
SOX4-201ENST00000244745 Q5W150 140 aa12.04□□□□□ -0.48
SOX4-201ENST00000244745 HECTD1Q9ULT8 2610 aa12.04□□□□□ -0.48
SOX4-201ENST00000244745 ITPR3Q14573 2671 aa12.03□□□□□ -0.48
SOX4-201ENST00000244745 ZCCHC13Q8WW36 166 aaKnown RBP11.98□□□□□ -0.49
SOX4-201ENST00000244745 CELSR3Q9NYQ7 3312 aa11.96□□□□□ -0.49
SOX4-201ENST00000244745 WDFY4Q6ZS81 3184 aa11.96□□□□□ -0.5
SOX4-201ENST00000244745 LUZP6Q538Z0 58 aa11.96□□□□□ -0.5
SOX4-201ENST00000244745 KRTAP4-16G5E9R7 235 aaPredicted RBP11.93□□□□□ -0.5
SOX4-201ENST00000244745 AKAP13Q12802 2813 aa11.91□□□□□ -0.5
SOX4-201ENST00000244745 DMAC1Q96GE9 116 aa11.89□□□□□ -0.51
SOX4-201ENST00000244745 M0R2T5 61 aa11.88□□□□□ -0.51
SOX4-201ENST00000244745 USP24Q9UPU5 2620 aa11.88□□□□□ -0.51
SOX4-201ENST00000244745 VPS13AQ96RL7 3174 aa11.87□□□□□ -0.51
SOX4-201ENST00000244745 KRTAP29-1A8MX34 341 aaPredicted RBP11.86□□□□□ -0.51
SOX4-201ENST00000244745 SZT2Q5T011 3432 aa11.86□□□□□ -0.51
SOX4-201ENST00000244745 LINC00483Q53H64 154 aa11.84□□□□□ -0.51
SOX4-201ENST00000244745 ATRQ13535 2644 aa11.84□□□□□ -0.51
SOX4-201ENST00000244745 Q6ZR54 194 aa11.84□□□□□ -0.51
SOX4-201ENST00000244745 VCANP13611 3396 aa11.83□□□□□ -0.52
SOX4-201ENST00000244745 FRYQ5TBA9 3013 aa11.82□□□□□ -0.52
SOX4-201ENST00000244745 LAMA1P25391 3075 aa11.82□□□□□ -0.52
SOX4-201ENST00000244745 CAMK2N1Q7Z7J9 78 aa11.81□□□□□ -0.52
SOX4-201ENST00000244745 PANO1I0J062 215 aa11.8□□□□□ -0.52
SOX4-201ENST00000244745 Q6ZSA8 131 aa11.8□□□□□ -0.52
SOX4-201ENST00000244745 MGAM2Q2M2H8 2515 aa11.77□□□□□ -0.53
SOX4-201ENST00000244745 A6NN06 94 aa11.76□□□□□ -0.53
SOX4-201ENST00000244745 S4R3F8 94 aa11.75□□□□□ -0.53
SOX4-201ENST00000244745 ASB16-AS1Q495Z4 193 aa11.73□□□□□ -0.53
SOX4-201ENST00000244745 ZNF292O60281 2723 aa11.73□□□□□ -0.53
SOX4-201ENST00000244745 CFAP46Q8IYW2 2715 aa11.71□□□□□ -0.54
SOX4-201ENST00000244745 KRTAP10-2P60368 255 aa11.69□□□□□ -0.54
SOX4-201ENST00000244745 ROMO1P60602 79 aa11.69□□□□□ -0.54
SOX4-201ENST00000244745 LCE6AA0A183 80 aa11.69□□□□□ -0.54
SOX4-201ENST00000244745 CENPEQ02224 2701 aa11.69□□□□□ -0.54
SOX4-201ENST00000244745 DSPP15924 2871 aaKnown RBP11.68□□□□□ -0.54
SOX4-201ENST00000244745 KRTAP10-1P60331 282 aa11.68□□□□□ -0.54
SOX4-201ENST00000244745 H1FX-AS1Q4G0G2 97 aa11.68□□□□□ -0.54
SOX4-201ENST00000244745 CHD6Q8TD26 2715 aa11.66□□□□□ -0.54
SOX4-201ENST00000244745 KRTAP11-1Q8IUC1 163 aa11.66□□□□□ -0.54
SOX4-201ENST00000244745 COL6A3P12111 3177 aa11.64□□□□□ -0.55
SOX4-201ENST00000244745 A0A087X002 238 aa11.64□□□□□ -0.55
SOX4-201ENST00000244745 NOTCH2NLQ7Z3S9 236 aa11.64□□□□□ -0.55
SOX4-201ENST00000244745 KRTAP7-1Q8IUC3 87 aa11.63□□□□□ -0.55
SOX4-201ENST00000244745 SPATA8Q6RVD6 105 aa11.62□□□□□ -0.55
SOX4-201ENST00000244745 FREM2Q5SZK8 3169 aa11.62□□□□□ -0.55
SOX4-201ENST00000244745 HELZ2Q9BYK8 2649 aaKnown RBP11.61□□□□□ -0.55
SOX4-201ENST00000244745 A8MU10 97 aa11.61□□□□□ -0.55
SOX4-201ENST00000244745 GCN1Q92616 2671 aaKnown RBP11.61□□□□□ -0.55
SOX4-201ENST00000244745 FLNBO75369 2602 aaKnown RBP11.61□□□□□ -0.55
SOX4-201ENST00000244745 RPL37P61927 97 aaKnown RBP11.6□□□□□ -0.55
SOX4-201ENST00000244745 SPTBN5Q9NRC6 3674 aaKnown RBP11.59□□□□□ -0.55
SOX4-201ENST00000244745 MAST4O15021 2626 aa11.58□□□□□ -0.56
SOX4-201ENST00000244745 KALRNO60229 2985 aa11.56□□□□□ -0.56
SOX4-201ENST00000244745 ADM2Q7Z4H4 148 aa11.51□□□□□ -0.57
SOX4-201ENST00000244745 A0A0A0MQY5 61 aa11.5□□□□□ -0.57
SOX4-201ENST00000244745 NBEAQ8NFP9 2946 aa11.5□□□□□ -0.57
SOX4-201ENST00000244745 NBEAL2Q6ZNJ1 2754 aa11.49□□□□□ -0.57
SOX4-201ENST00000244745 LRBAP50851 2863 aa11.47□□□□□ -0.57
SOX4-201ENST00000244745 FRYLO94915 3013 aa11.44□□□□□ -0.58
SOX4-201ENST00000244745 KRTAP25-1Q3LHN0 102 aa11.44□□□□□ -0.58
SOX4-201ENST00000244745 TEX15Q9BXT5 2789 aa11.42□□□□□ -0.58
SOX4-201ENST00000244745 UNC79Q9P2D8 2635 aa11.41□□□□□ -0.58
SOX4-201ENST00000244745 Q5VSD8 79 aa11.41□□□□□ -0.58
SOX4-201ENST00000244745 MAP1AP78559 2803 aaPredicted RBP11.4□□□□□ -0.59
SOX4-201ENST00000244745 BOD1L1Q8NFC6 3051 aa11.39□□□□□ -0.59
SOX4-201ENST00000244745 Q6ZRN7 208 aaPredicted RBP11.39□□□□□ -0.59
SOX4-201ENST00000244745 R4GN34 69 aa11.38□□□□□ -0.59
SOX4-201ENST00000244745 SPEGQ15772 3267 aa11.37□□□□□ -0.59
SOX4-201ENST00000244745 USP34Q70CQ2 3546 aa11.34□□□□□ -0.59
SOX4-201ENST00000244745 KRTAP13-1Q8IUC0 172 aa11.33□□□□□ -0.6
SOX4-201ENST00000244745 ADGRG4Q8IZF6 3080 aa11.33□□□□□ -0.6
SOX4-201ENST00000244745 IGSF10Q6WRI0 2623 aa11.32□□□□□ -0.6
SOX4-201ENST00000244745 SEC61BP60468 96 aaKnown RBP11.32□□□□□ -0.6
SOX4-201ENST00000244745 SETXQ7Z333 2677 aaKnown RBP11.31□□□□□ -0.6
SOX4-201ENST00000244745 ATMQ13315 3056 aa11.27□□□□□ -0.61
SOX4-201ENST00000244745 M0QZ58 72 aa11.26□□□□□ -0.61
SOX4-201ENST00000244745 PLAC4Q8WY50 150 aa11.24□□□□□ -0.61
SOX4-201ENST00000244745 KRTAP13-2Q52LG2 175 aa11.23□□□□□ -0.61
SOX4-201ENST00000244745 NBEAL1Q6ZS30 2694 aa11.23□□□□□ -0.61
SOX4-201ENST00000244745 TEP1Q99973 2627 aaKnown RBP11.23□□□□□ -0.61
SOX4-201ENST00000244745 KRTAP16-1A8MUX0 517 aa11.22□□□□□ -0.61
SOX4-201ENST00000244745 ZZEF1O43149 2961 aa11.21□□□□□ -0.61
SOX4-201ENST00000244745 REV3LO60673 3130 aa11.16□□□□□ -0.62
SOX4-201ENST00000244745 EYSQ5T1H1 3165 aa11.14□□□□□ -0.63
SOX4-201ENST00000244745 CFAP47Q6ZTR5 3102 aa11.13□□□□□ -0.63
SOX4-201ENST00000244745 MYO15AQ9UKN7 3530 aa11.13□□□□□ -0.63
SOX4-201ENST00000244745 RPS29P62273 56 aaKnown RBP11.12□□□□□ -0.63
SOX4-201ENST00000244745 FLG2Q5D862 2391 aaPredicted RBP11.11□□□□□ -0.63
SOX4-201ENST00000244745 DMXL2Q8TDJ6 3036 aa11.1□□□□□ -0.63
SOX4-201ENST00000244745 ITPR1Q14643 2758 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms