RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 KRTAP29-1A8MX34 341 aaPredicted RBP9.73□□□□□ -0.85
DDX55-201ENST00000238146 PSPHP1O15172 72 aa9.72□□□□□ -0.85
DDX55-201ENST00000238146 A0A096LNI7 61 aa9.71□□□□□ -0.85
DDX55-201ENST00000238146 LINC00208Q96KT6 92 aa9.71□□□□□ -0.85
DDX55-201ENST00000238146 MAST4O15021 2626 aa9.71□□□□□ -0.86
DDX55-201ENST00000238146 KMT2BQ9UMN6 2715 aaPredicted RBP9.71□□□□□ -0.86
DDX55-201ENST00000238146 IGKV2-24A0A0C4DH68 120 aa9.7□□□□□ -0.86
DDX55-201ENST00000238146 PRB2P02812 416 aaPredicted RBP9.7□□□□□ -0.86
DDX55-201ENST00000238146 PRR15Q8IV56 129 aa9.69□□□□□ -0.86
DDX55-201ENST00000238146 C16orf90A8MZG2 172 aa9.68□□□□□ -0.86
DDX55-201ENST00000238146 UBE2AP49459 152 aa9.68□□□□□ -0.86
DDX55-201ENST00000238146 CMYA5Q8N3K9 4069 aa9.67□□□□□ -0.86
DDX55-201ENST00000238146 B9D2Q9BPU9 175 aa9.67□□□□□ -0.86
DDX55-201ENST00000238146 NOTCH1P46531 2555 aa9.66□□□□□ -0.86
DDX55-201ENST00000238146 CASC2Q6XLA1 102 aa9.66□□□□□ -0.86
DDX55-201ENST00000238146 STAB1Q9NY15 2570 aa9.66□□□□□ -0.86
DDX55-201ENST00000238146 H0Y9P7 68 aa9.66□□□□□ -0.86
DDX55-201ENST00000238146 CNBPP62633 177 aaKnown RBP9.66□□□□□ -0.86
DDX55-201ENST00000238146 SRRM2Q9UQ35 2752 aaKnown RBP9.64□□□□□ -0.87
DDX55-201ENST00000238146 A8MUN3 132 aa9.64□□□□□ -0.87
DDX55-201ENST00000238146 KRTAP11-1Q8IUC1 163 aa9.64□□□□□ -0.87
DDX55-201ENST00000238146 V9GYY9 64 aa9.64□□□□□ -0.87
DDX55-201ENST00000238146 DNAH3Q8TD57 4116 aa9.63□□□□□ -0.87
DDX55-201ENST00000238146 SPANXA2-OT1Q8N9U9 137 aa9.63□□□□□ -0.87
DDX55-201ENST00000238146 LINC00472Q9H8W2 130 aa9.63□□□□□ -0.87
DDX55-201ENST00000238146 DNAH10Q8IVF4 4471 aa9.62□□□□□ -0.87
DDX55-201ENST00000238146 A8MWP4 228 aa9.62□□□□□ -0.87
DDX55-201ENST00000238146 H3BPC8 53 aa9.62□□□□□ -0.87
DDX55-201ENST00000238146 KRTAP1-5Q9BYS1 174 aa9.61□□□□□ -0.87
DDX55-201ENST00000238146 SPRR1BP22528 89 aa9.61□□□□□ -0.87
DDX55-201ENST00000238146 PHF5AQ7RTV0 110 aaKnown RBP9.6□□□□□ -0.87
DDX55-201ENST00000238146 KRTAP24-1Q3LI83 254 aa9.59□□□□□ -0.87
DDX55-201ENST00000238146 CHTF8P0CG12 524 aa9.58□□□□□ -0.88
DDX55-201ENST00000238146 Q5VV11 94 aa9.58□□□□□ -0.88
DDX55-201ENST00000238146 C9orf163Q8N9P6 203 aa9.58□□□□□ -0.88
DDX55-201ENST00000238146 FBN1P35555 2871 aaKnown RBP9.57□□□□□ -0.88
DDX55-201ENST00000238146 H0Y9J4 135 aa9.57□□□□□ -0.88
DDX55-201ENST00000238146 Q8N9P0 234 aaPredicted RBP9.56□□□□□ -0.88
DDX55-201ENST00000238146 HUWE1Q7Z6Z7 4374 aaKnown RBP9.56□□□□□ -0.88
DDX55-201ENST00000238146 NBEAL1Q6ZS30 2694 aa9.55□□□□□ -0.88
DDX55-201ENST00000238146 COL6A5A8TX70 2615 aa9.54□□□□□ -0.88
DDX55-201ENST00000238146 A8MU10 97 aa9.54□□□□□ -0.88
DDX55-201ENST00000238146 MMP24-AS1A0A0U1RRL7 71 aa9.53□□□□□ -0.88
DDX55-201ENST00000238146 PMAIP1Q13794 54 aa9.53□□□□□ -0.88
DDX55-201ENST00000238146 LYSTQ99698 3801 aa9.52□□□□□ -0.88
DDX55-201ENST00000238146 LIMD2Q9BT23 127 aa9.51□□□□□ -0.89
DDX55-201ENST00000238146 DNAH9Q9NYC9 4486 aa9.51□□□□□ -0.89
DDX55-201ENST00000238146 SEC61GP60059 68 aa9.49□□□□□ -0.89
DDX55-201ENST00000238146 CHKB-CPT1BH3BT56 60 aa9.48□□□□□ -0.89
DDX55-201ENST00000238146 IGLV7-46A0A075B6I9 117 aa9.48□□□□□ -0.89
DDX55-201ENST00000238146 PRR15LQ9BU68 103 aa9.48□□□□□ -0.89
DDX55-201ENST00000238146 K7EIL1 84 aa9.47□□□□□ -0.89
DDX55-201ENST00000238146 CSMD3Q7Z407 3707 aa9.47□□□□□ -0.89
DDX55-201ENST00000238146 COA5Q86WW8 74 aa9.47□□□□□ -0.89
DDX55-201ENST00000238146 C14orf177Q52M58 125 aa9.46□□□□□ -0.89
DDX55-201ENST00000238146 KRTAP13-1Q8IUC0 172 aa9.45□□□□□ -0.9
DDX55-201ENST00000238146 Q96NJ1 140 aa9.45□□□□□ -0.9
DDX55-201ENST00000238146 ASB16-AS1Q495Z4 193 aa9.44□□□□□ -0.9
DDX55-201ENST00000238146 TENM2Q9NT68 2774 aa9.43□□□□□ -0.9
DDX55-201ENST00000238146 PCOTHQ58A44 107 aa9.43□□□□□ -0.9
DDX55-201ENST00000238146 STAB2Q8WWQ8 2551 aa9.43□□□□□ -0.9
DDX55-201ENST00000238146 PANO1I0J062 215 aa9.42□□□□□ -0.9
DDX55-201ENST00000238146 UBE2DNLQ8IWF7 75 aa9.42□□□□□ -0.9
DDX55-201ENST00000238146 CD164Q04900 197 aa9.41□□□□□ -0.9
DDX55-201ENST00000238146 LOC101927531A0A1B0GV80 90 aa9.4□□□□□ -0.9
DDX55-201ENST00000238146 TP53AIP1Q9HCN2 124 aa9.4□□□□□ -0.9
DDX55-201ENST00000238146 IGLV9-49A0A0B4J1Y8 123 aa9.4□□□□□ -0.9
DDX55-201ENST00000238146 Q75L30 129 aa9.4□□□□□ -0.9
DDX55-201ENST00000238146 MOBPQ13875 183 aa9.39□□□□□ -0.91
DDX55-201ENST00000238146 C8orf17Q9NRJ1 99 aa9.38□□□□□ -0.91
DDX55-201ENST00000238146 APLNQ9ULZ1 77 aa9.38□□□□□ -0.91
DDX55-201ENST00000238146 Q6ZR54 194 aa9.38□□□□□ -0.91
DDX55-201ENST00000238146 LCA10Q71F78 164 aa9.38□□□□□ -0.91
DDX55-201ENST00000238146 COL7A1Q02388 2944 aa9.37□□□□□ -0.91
DDX55-201ENST00000238146 A6NED7 52 aa9.34□□□□□ -0.91
DDX55-201ENST00000238146 IGHV6-1A0A0B4J1U7 121 aa9.33□□□□□ -0.92
DDX55-201ENST00000238146 SPTSSBQ8NFR3 76 aa9.33□□□□□ -0.92
DDX55-201ENST00000238146 A0A1B0GVX0 72 aa9.32□□□□□ -0.92
DDX55-201ENST00000238146 NDUFS5O43920 106 aa9.32□□□□□ -0.92
DDX55-201ENST00000238146 DNAH7Q8WXX0 4024 aa9.32□□□□□ -0.92
DDX55-201ENST00000238146 LINC00483Q53H64 154 aa9.32□□□□□ -0.92
DDX55-201ENST00000238146 MGAM2Q2M2H8 2515 aa9.32□□□□□ -0.92
DDX55-201ENST00000238146 SPAG11AQ6PDA7 123 aa9.31□□□□□ -0.92
DDX55-201ENST00000238146 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.31□□□□□ -0.92
DDX55-201ENST00000238146 ATP11AUNQ6ZP68 121 aa9.3□□□□□ -0.92
DDX55-201ENST00000238146 LINC01558Q9Y6Z2 57 aa9.3□□□□□ -0.92
DDX55-201ENST00000238146 PLAC8Q9NZF1 115 aa9.3□□□□□ -0.92
DDX55-201ENST00000238146 Q6ZRN7 208 aaPredicted RBP9.28□□□□□ -0.92
DDX55-201ENST00000238146 SPACA4Q8TDM5 124 aa9.28□□□□□ -0.92
DDX55-201ENST00000238146 MRPL34Q9BQ48 92 aaKnown RBP9.28□□□□□ -0.92
DDX55-201ENST00000238146 A0A087X002 238 aa9.28□□□□□ -0.92
DDX55-201ENST00000238146 NBDYA0A0U1RRE5 68 aa9.28□□□□□ -0.92
DDX55-201ENST00000238146 HRES1P13985 223 aa9.28□□□□□ -0.92
DDX55-201ENST00000238146 NOTCH2NLQ7Z3S9 236 aa9.28□□□□□ -0.92
DDX55-201ENST00000238146 WWC2-AS2Q96NR7 200 aa9.28□□□□□ -0.92
DDX55-201ENST00000238146 CDC42SE1Q9NRR8 79 aa9.27□□□□□ -0.93
DDX55-201ENST00000238146 CDK2AP2O75956 126 aa9.26□□□□□ -0.93
DDX55-201ENST00000238146 KTN1-AS1Q86SY8 53 aa9.25□□□□□ -0.93
DDX55-201ENST00000238146 DYNC2H1Q8NCM8 4307 aaKnown RBP9.25□□□□□ -0.93
DDX55-201ENST00000238146 ANAPC11Q9NYG5 84 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms