RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 SMIM29Q86T20 159 aa5.98□□□□□ -1.45
HMGCL-201ENST00000235958 LAMTOR3Q9UHA4 124 aa5.98□□□□□ -1.45
HMGCL-201ENST00000235958 FAT3Q8TDW7 4589 aa5.98□□□□□ -1.45
HMGCL-201ENST00000235958 LST1O00453 97 aa5.97□□□□□ -1.45
HMGCL-201ENST00000235958 TCL1BO95988 128 aa5.97□□□□□ -1.45
HMGCL-201ENST00000235958 TRACP01848 142 aa5.97□□□□□ -1.45
HMGCL-201ENST00000235958 OCIAD2Q56VL3 154 aa5.97□□□□□ -1.45
HMGCL-201ENST00000235958 IGLV9-49A0A0B4J1Y8 123 aa5.96□□□□□ -1.46
HMGCL-201ENST00000235958 DNAL4O96015 105 aa5.96□□□□□ -1.46
HMGCL-201ENST00000235958 KRTAP3-3Q9BYR6 98 aa5.96□□□□□ -1.46
HMGCL-201ENST00000235958 KRTAP3-2Q9BYR7 98 aa5.96□□□□□ -1.46
HMGCL-201ENST00000235958 TRBV20-1A0A075B6N2 111 aa5.95□□□□□ -1.46
HMGCL-201ENST00000235958 A0A1W2PPM0 123 aa5.95□□□□□ -1.46
HMGCL-201ENST00000235958 MOBPQ13875 183 aa5.95□□□□□ -1.46
HMGCL-201ENST00000235958 ATXN8Q156A1 80 aa5.95□□□□□ -1.46
HMGCL-201ENST00000235958 LYRM7Q5U5X0 104 aa5.95□□□□□ -1.46
HMGCL-201ENST00000235958 SSBP3-AS1Q7Z2R9 100 aa5.95□□□□□ -1.46
HMGCL-201ENST00000235958 PPDPFLQ8WWR9 84 aa5.95□□□□□ -1.46
HMGCL-201ENST00000235958 TNXBP22105 4242 aa5.94□□□□□ -1.46
HMGCL-201ENST00000235958 GHRHP01286 108 aa5.94□□□□□ -1.46
HMGCL-201ENST00000235958 FABP2P12104 132 aa5.94□□□□□ -1.46
HMGCL-201ENST00000235958 ORMDL1Q9P0S3 153 aa5.94□□□□□ -1.46
HMGCL-201ENST00000235958 C9orf153Q5TBE3 101 aa5.93□□□□□ -1.46
HMGCL-201ENST00000235958 HERC1Q15751 4861 aa5.92□□□□□ -1.46
HMGCL-201ENST00000235958 H3BQ85 93 aa5.92□□□□□ -1.46
HMGCL-201ENST00000235958 TMEM256-PLSCR3K7ERE1 68 aa5.92□□□□□ -1.46
HMGCL-201ENST00000235958 BAALC-AS2P0C853 105 aa5.92□□□□□ -1.46
HMGCL-201ENST00000235958 NDUFV3P56181 108 aaKnown RBP5.92□□□□□ -1.46
HMGCL-201ENST00000235958 Q8NBF4 154 aa5.92□□□□□ -1.46
HMGCL-201ENST00000235958 A0A0G2JQZ4 141 aa5.9□□□□□ -1.46
HMGCL-201ENST00000235958 F8WEM9 126 aa5.9□□□□□ -1.46
HMGCL-201ENST00000235958 C4orf48Q5BLP8 95 aa5.9□□□□□ -1.46
HMGCL-201ENST00000235958 LINC00304Q8N9R0 145 aa5.9□□□□□ -1.46
HMGCL-201ENST00000235958 IGLV8-61A0A075B6I0 122 aa5.89□□□□□ -1.47
HMGCL-201ENST00000235958 H3BMG7 143 aa5.89□□□□□ -1.47
HMGCL-201ENST00000235958 SPAG11AQ6PDA7 123 aa5.89□□□□□ -1.47
HMGCL-201ENST00000235958 SPCS1Q9Y6A9 102 aa5.89□□□□□ -1.47
HMGCL-201ENST00000235958 C9JAW5 83 aa5.88□□□□□ -1.47
HMGCL-201ENST00000235958 UBE2V1Q13404 147 aa5.88□□□□□ -1.47
HMGCL-201ENST00000235958 Q6JHZ5 121 aa5.87□□□□□ -1.47
HMGCL-201ENST00000235958 SPINK1P00995 79 aa5.86□□□□□ -1.47
HMGCL-201ENST00000235958 IGFL1Q6UW32 110 aa5.86□□□□□ -1.47
HMGCL-201ENST00000235958 HRCT1Q6UXD1 115 aa5.86□□□□□ -1.47
HMGCL-201ENST00000235958 ANKRD29Q8N6D5 301 aa5.86□□□□□ -1.47
HMGCL-201ENST00000235958 A0A1B0GV72 72 aa5.84□□□□□ -1.47
HMGCL-201ENST00000235958 K7EP34 96 aa5.84□□□□□ -1.47
HMGCL-201ENST00000235958 CD164Q04900 197 aa5.84□□□□□ -1.47
HMGCL-201ENST00000235958 MTURNQ8N3F0 131 aa5.84□□□□□ -1.47
HMGCL-201ENST00000235958 RBM3P98179 157 aaKnown RBP5.83□□□□□ -1.48
HMGCL-201ENST00000235958 GTF2H5Q6ZYL4 71 aa5.83□□□□□ -1.48
HMGCL-201ENST00000235958 H3BT86 120 aa5.81□□□□□ -1.48
HMGCL-201ENST00000235958 SMCPP49901 116 aaPredicted RBP5.81□□□□□ -1.48
HMGCL-201ENST00000235958 JMJD7-PLA2G4BH0Y9G9 81 aa5.8□□□□□ -1.48
HMGCL-201ENST00000235958 RPS29P62273 56 aaKnown RBP5.8□□□□□ -1.48
HMGCL-201ENST00000235958 TEN1Q86WV5 123 aa5.8□□□□□ -1.48
HMGCL-201ENST00000235958 DSCR8Q96T75 97 aa5.8□□□□□ -1.48
HMGCL-201ENST00000235958 TRBV7-4A0A0J9YYF1 115 aa5.79□□□□□ -1.48
HMGCL-201ENST00000235958 A0A1W2PNM2 257 aa5.79□□□□□ -1.48
HMGCL-201ENST00000235958 OBSCN-AS1Q96MR7 158 aa5.79□□□□□ -1.48
HMGCL-201ENST00000235958 PRO0461Q9UI25 63 aa5.79□□□□□ -1.48
HMGCL-201ENST00000235958 TRBV7-7A0A0K0K1E9 115 aa5.78□□□□□ -1.48
HMGCL-201ENST00000235958 Q6Q795 121 aa5.78□□□□□ -1.48
HMGCL-201ENST00000235958 RETNLBQ9BQ08 111 aa5.78□□□□□ -1.48
HMGCL-201ENST00000235958 A0A1B0GV90 55 aa5.77□□□□□ -1.49
HMGCL-201ENST00000235958 F8W1H4 67 aa5.77□□□□□ -1.49
HMGCL-201ENST00000235958 CCKP06307 115 aa5.77□□□□□ -1.49
HMGCL-201ENST00000235958 Q5XG85 94 aa5.77□□□□□ -1.49
HMGCL-201ENST00000235958 LIMD2Q9BT23 127 aa5.77□□□□□ -1.49
HMGCL-201ENST00000235958 C14orf132Q9NPU4 83 aa5.76□□□□□ -1.49
HMGCL-201ENST00000235958 LOC110117498A0A087WWA1 95 aa5.75□□□□□ -1.49
HMGCL-201ENST00000235958 PDE6GP18545 87 aa5.75□□□□□ -1.49
HMGCL-201ENST00000235958 PRR4Q16378 134 aa5.75□□□□□ -1.49
HMGCL-201ENST00000235958 Q6ZQT0 140 aa5.75□□□□□ -1.49
HMGCL-201ENST00000235958 VPS25Q9BRG1 176 aa5.74□□□□□ -1.49
HMGCL-201ENST00000235958 A0A087WSZ3 146 aa5.73□□□□□ -1.49
HMGCL-201ENST00000235958 C1orf195Q5TG92 126 aa5.73□□□□□ -1.49
HMGCL-201ENST00000235958 ASB16-AS1Q495Z4 193 aa5.72□□□□□ -1.49
HMGCL-201ENST00000235958 IGLV7-46A0A075B6I9 117 aa5.71□□□□□ -1.5
HMGCL-201ENST00000235958 ETDBQ3ZM63 59 aa5.71□□□□□ -1.5
HMGCL-201ENST00000235958 HMCN2Q8NDA2 5059 aa5.7□□□□□ -1.5
HMGCL-201ENST00000235958 FP248Q71RG6 208 aaPredicted RBP5.7□□□□□ -1.5
HMGCL-201ENST00000235958 SS18L2Q9UHA2 77 aa5.7□□□□□ -1.5
HMGCL-201ENST00000235958 A0A1B0GW54 56 aa5.69□□□□□ -1.5
HMGCL-201ENST00000235958 C21orf62-AS1Q17RA5 79 aa5.67□□□□□ -1.5
HMGCL-201ENST00000235958 Q96NJ1 140 aa5.67□□□□□ -1.5
HMGCL-201ENST00000235958 LINC00472Q9H8W2 130 aa5.66□□□□□ -1.5
HMGCL-201ENST00000235958 DEFB116Q30KQ4 102 aa5.65□□□□□ -1.5
HMGCL-201ENST00000235958 IGKV4-1P06312 121 aa5.63□□□□□ -1.51
HMGCL-201ENST00000235958 NREPQ16612 68 aa5.63□□□□□ -1.51
HMGCL-201ENST00000235958 TPRXLQ17RH7 258 aa5.63□□□□□ -1.51
HMGCL-201ENST00000235958 KRTAP13-3Q3SY46 172 aa5.63□□□□□ -1.51
HMGCL-201ENST00000235958 CDIP1Q9H305 208 aa5.61□□□□□ -1.51
HMGCL-201ENST00000235958 LPAP08519 4548 aa5.61□□□□□ -1.51
HMGCL-201ENST00000235958 C9orf92A6NGG3 77 aa5.6□□□□□ -1.51
HMGCL-201ENST00000235958 LINC00846Q9NV44 126 aa5.59□□□□□ -1.51
HMGCL-201ENST00000235958 J3KT08 172 aa5.58□□□□□ -1.52
HMGCL-201ENST00000235958 SIGMAR1Q99720 223 aa5.58□□□□□ -1.52
HMGCL-201ENST00000235958 Q6ZVQ6 151 aa5.57□□□□□ -1.52
HMGCL-201ENST00000235958 UBL5Q9BZL1 73 aa5.55□□□□□ -1.52
HMGCL-201ENST00000235958 BPY2O14599 106 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms