RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 KRTAP10-11P60412 298 aa5.14□□□□□ -1.59
APOB-201ENST00000233242 C9orf92A6NGG3 77 aa5.13□□□□□ -1.59
APOB-201ENST00000233242 WWC2-AS2Q96NR7 200 aa5.12□□□□□ -1.59
APOB-201ENST00000233242 EP400Q96L91 3159 aa5.12□□□□□ -1.59
APOB-201ENST00000233242 K7EIL1 84 aa5.12□□□□□ -1.59
APOB-201ENST00000233242 CASC10Q5T4H9 136 aa5.11□□□□□ -1.59
APOB-201ENST00000233242 COX6B2Q6YFQ2 88 aa5.11□□□□□ -1.59
APOB-201ENST00000233242 NSD1Q96L73 2696 aaPredicted RBP5.1□□□□□ -1.59
APOB-201ENST00000233242 ZCCHC13Q8WW36 166 aaKnown RBP5.1□□□□□ -1.59
APOB-201ENST00000233242 SRCAPQ6ZRS2 3230 aa5.1□□□□□ -1.59
APOB-201ENST00000233242 Q5W150 140 aa5.09□□□□□ -1.59
APOB-201ENST00000233242 TNP2Q05952 138 aa5.08□□□□□ -1.6
APOB-201ENST00000233242 UBR5O95071 2799 aaPredicted RBP5.08□□□□□ -1.6
APOB-201ENST00000233242 ITPR1Q14643 2758 aa5.07□□□□□ -1.6
APOB-201ENST00000233242 Q6ZR54 194 aa5.07□□□□□ -1.6
APOB-201ENST00000233242 Q8NDZ9 215 aa5.07□□□□□ -1.6
APOB-201ENST00000233242 ROMO1P60602 79 aa5.05□□□□□ -1.6
APOB-201ENST00000233242 KRTAP10-3P60369 221 aa5.04□□□□□ -1.6
APOB-201ENST00000233242 CEP350Q5VT06 3117 aa5.04□□□□□ -1.6
APOB-201ENST00000233242 RPL37P61927 97 aaKnown RBP5.03□□□□□ -1.6
APOB-201ENST00000233242 CAMK2N1Q7Z7J9 78 aa5.02□□□□□ -1.61
APOB-201ENST00000233242 A0A087X002 238 aa5.02□□□□□ -1.61
APOB-201ENST00000233242 SPATA8Q6RVD6 105 aa5.02□□□□□ -1.61
APOB-201ENST00000233242 A6NN06 94 aa5.01□□□□□ -1.61
APOB-201ENST00000233242 KRTAP29-1A8MX34 341 aaPredicted RBP5.01□□□□□ -1.61
APOB-201ENST00000233242 PLAC8Q9NZF1 115 aa5.01□□□□□ -1.61
APOB-201ENST00000233242 UTP20O75691 2785 aaKnown RBP5□□□□□ -1.61
APOB-201ENST00000233242 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5□□□□□ -1.61
APOB-201ENST00000233242 LCE6AA0A183 80 aa4.99□□□□□ -1.61
APOB-201ENST00000233242 S4R3F8 94 aa4.99□□□□□ -1.61
APOB-201ENST00000233242 KRTAP26-1Q6PEX3 210 aa4.98□□□□□ -1.61
APOB-201ENST00000233242 J3QL48 77 aa4.98□□□□□ -1.61
APOB-201ENST00000233242 H1FX-AS1Q4G0G2 97 aa4.98□□□□□ -1.61
APOB-201ENST00000233242 Q6ZSA8 131 aa4.97□□□□□ -1.61
APOB-201ENST00000233242 A0A0C4DFX4 3053 aa4.97□□□□□ -1.61
APOB-201ENST00000233242 APCP25054 2843 aa4.97□□□□□ -1.61
APOB-201ENST00000233242 KRTAP16-1A8MUX0 517 aa4.97□□□□□ -1.61
APOB-201ENST00000233242 KRTAP1-3Q8IUG1 177 aa4.96□□□□□ -1.62
APOB-201ENST00000233242 DNAH12Q6ZR08 3092 aa4.96□□□□□ -1.62
APOB-201ENST00000233242 IGSF10Q6WRI0 2623 aa4.95□□□□□ -1.62
APOB-201ENST00000233242 KRTAP1-1Q07627 177 aa4.95□□□□□ -1.62
APOB-201ENST00000233242 CFAP54Q96N23 3096 aa4.95□□□□□ -1.62
APOB-201ENST00000233242 KRTAP4-16G5E9R7 235 aaPredicted RBP4.94□□□□□ -1.62
APOB-201ENST00000233242 ITPR2Q14571 2701 aa4.94□□□□□ -1.62
APOB-201ENST00000233242 KMT2BQ9UMN6 2715 aaPredicted RBP4.94□□□□□ -1.62
APOB-201ENST00000233242 SMR3BP02814 79 aaPredicted RBP4.91□□□□□ -1.62
APOB-201ENST00000233242 KRTAP25-1Q3LHN0 102 aa4.91□□□□□ -1.62
APOB-201ENST00000233242 R4GN34 69 aa4.89□□□□□ -1.63
APOB-201ENST00000233242 MGAQ8IWI9 3026 aa4.89□□□□□ -1.63
APOB-201ENST00000233242 NIPBLQ6KC79 2804 aaeCLIP4.88□□□□□ -1.63
APOB-201ENST00000233242 DSPP15924 2871 aaKnown RBP4.87□□□□□ -1.63
APOB-201ENST00000233242 TRANK1O15050 2925 aa4.86□□□□□ -1.63
APOB-201ENST00000233242 FLNCQ14315 2725 aa4.86□□□□□ -1.63
APOB-201ENST00000233242 CHD7Q9P2D1 2997 aa4.85□□□□□ -1.63
APOB-201ENST00000233242 PANO1I0J062 215 aa4.84□□□□□ -1.63
APOB-201ENST00000233242 HIVEP1P15822 2718 aa4.84□□□□□ -1.64
APOB-201ENST00000233242 CHD9Q3L8U1 2897 aa4.82□□□□□ -1.64
APOB-201ENST00000233242 LRBAP50851 2863 aa4.81□□□□□ -1.64
APOB-201ENST00000233242 M0QZ58 72 aa4.8□□□□□ -1.64
APOB-201ENST00000233242 KRTAP1-5Q9BYS1 174 aa4.79□□□□□ -1.64
APOB-201ENST00000233242 FRYQ5TBA9 3013 aa4.79□□□□□ -1.64
APOB-201ENST00000233242 RPS29P62273 56 aaKnown RBP4.78□□□□□ -1.64
APOB-201ENST00000233242 SEC61BP60468 96 aaKnown RBP4.78□□□□□ -1.64
APOB-201ENST00000233242 C5orf42Q9H799 3197 aa4.77□□□□□ -1.65
APOB-201ENST00000233242 TENM3Q9P273 2699 aa4.76□□□□□ -1.65
APOB-201ENST00000233242 ASH1LQ9NR48 2969 aaKnown RBP4.76□□□□□ -1.65
APOB-201ENST00000233242 NDUFAF8A1L188 74 aa4.75□□□□□ -1.65
APOB-201ENST00000233242 NBEAQ8NFP9 2946 aa4.74□□□□□ -1.65
APOB-201ENST00000233242 ADM2Q7Z4H4 148 aa4.74□□□□□ -1.65
APOB-201ENST00000233242 NOTCH2NLQ7Z3S9 236 aa4.73□□□□□ -1.65
APOB-201ENST00000233242 KALRNO60229 2985 aa4.72□□□□□ -1.65
APOB-201ENST00000233242 LAMA2P24043 3122 aaKnown RBP4.72□□□□□ -1.65
APOB-201ENST00000233242 A8MU10 97 aa4.7□□□□□ -1.66
APOB-201ENST00000233242 PCNTO95613 3336 aa4.7□□□□□ -1.66
APOB-201ENST00000233242 CELSR2Q9HCU4 2923 aa4.7□□□□□ -1.66
APOB-201ENST00000233242 M0R2T5 61 aa4.69□□□□□ -1.66
APOB-201ENST00000233242 PLAC4Q8WY50 150 aa4.69□□□□□ -1.66
APOB-201ENST00000233242 KRTAP11-1Q8IUC1 163 aa4.69□□□□□ -1.66
APOB-201ENST00000233242 FRYLO94915 3013 aa4.69□□□□□ -1.66
APOB-201ENST00000233242 A8MUU9 505 aa4.68□□□□□ -1.66
APOB-201ENST00000233242 KRTAP13-1Q8IUC0 172 aa4.66□□□□□ -1.66
APOB-201ENST00000233242 KRTAP10-1P60331 282 aa4.66□□□□□ -1.66
APOB-201ENST00000233242 NF1P21359 2839 aa4.66□□□□□ -1.66
APOB-201ENST00000233242 PRUNE2Q8WUY3 3088 aa4.65□□□□□ -1.66
APOB-201ENST00000233242 DMXL2Q8TDJ6 3036 aa4.64□□□□□ -1.67
APOB-201ENST00000233242 TACC2O95359 2948 aa4.63□□□□□ -1.67
APOB-201ENST00000233242 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
APOB-201ENST00000233242 KRTAP7-1Q8IUC3 87 aa4.62□□□□□ -1.67
APOB-201ENST00000233242 TRIOO75962 3097 aa4.62□□□□□ -1.67
APOB-201ENST00000233242 KRTAP10-2P60368 255 aa4.62□□□□□ -1.67
APOB-201ENST00000233242 C20orf166-AS1Q96NR2 134 aa4.61□□□□□ -1.67
APOB-201ENST00000233242 TENM4Q6N022 2769 aa4.61□□□□□ -1.67
APOB-201ENST00000233242 GOLGB1Q14789 3259 aaKnown RBP4.61□□□□□ -1.67
APOB-201ENST00000233242 ZANQ9Y493 2812 aa4.6□□□□□ -1.67
APOB-201ENST00000233242 VPS13AQ96RL7 3174 aa4.6□□□□□ -1.67
APOB-201ENST00000233242 Q5VSD8 79 aa4.6□□□□□ -1.67
APOB-201ENST00000233242 DCHS2Q6V1P9 2916 aa4.59□□□□□ -1.67
APOB-201ENST00000233242 WDFY4Q6ZS81 3184 aa4.59□□□□□ -1.67
APOB-201ENST00000233242 Q6ZRN7 208 aaPredicted RBP4.59□□□□□ -1.68
APOB-201ENST00000233242 TENM1Q9UKZ4 2725 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms