RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 UBR4Q5T4S7 5183 aa8.19□□□□□ -1.1
VEGFA-201ENST00000230480 J3KT08 172 aa8.19□□□□□ -1.1
VEGFA-201ENST00000230480 RPS28P62857 69 aaKnown RBP8.19□□□□□ -1.1
VEGFA-201ENST00000230480 ATOX1O00244 68 aa8.18□□□□□ -1.1
VEGFA-201ENST00000230480 NKAPP1Q8N9T2 125 aa8.18□□□□□ -1.1
VEGFA-201ENST00000230480 KRTAP4-16G5E9R7 235 aaPredicted RBP8.17□□□□□ -1.1
VEGFA-201ENST00000230480 CRYGAP11844 174 aa8.17□□□□□ -1.1
VEGFA-201ENST00000230480 COX7CP15954 63 aa8.17□□□□□ -1.1
VEGFA-201ENST00000230480 HIST1H4AP62805 103 aaKnown RBP8.17□□□□□ -1.1
VEGFA-201ENST00000230480 LINC00308Q8TCZ7 52 aa8.17□□□□□ -1.1
VEGFA-201ENST00000230480 SPRR1AP35321 89 aa8.15□□□□□ -1.1
VEGFA-201ENST00000230480 C5orf47Q569G3 176 aa8.15□□□□□ -1.1
VEGFA-201ENST00000230480 LRP2P98164 4655 aa8.14□□□□□ -1.11
VEGFA-201ENST00000230480 A0A087X002 238 aa8.14□□□□□ -1.11
VEGFA-201ENST00000230480 NCR3O14931 201 aa8.14□□□□□ -1.11
VEGFA-201ENST00000230480 PRLHP81277 87 aa8.14□□□□□ -1.11
VEGFA-201ENST00000230480 ANAPC11Q9NYG5 84 aa8.14□□□□□ -1.11
VEGFA-201ENST00000230480 Q6JHZ5 121 aa8.13□□□□□ -1.11
VEGFA-201ENST00000230480 SMCR5Q8TEV8 140 aa8.13□□□□□ -1.11
VEGFA-201ENST00000230480 KCNQ1DNQ9H478 68 aa8.13□□□□□ -1.11
VEGFA-201ENST00000230480 TRAV13-2A0A0B4J235 113 aa8.12□□□□□ -1.11
VEGFA-201ENST00000230480 TRBV10-3A0A0K0K1G6 114 aa8.12□□□□□ -1.11
VEGFA-201ENST00000230480 BAALC-AS2P0C853 105 aa8.12□□□□□ -1.11
VEGFA-201ENST00000230480 RPL28P46779 137 aaKnown RBP8.12□□□□□ -1.11
VEGFA-201ENST00000230480 OR13C6PQ8NH95 151 aa8.12□□□□□ -1.11
VEGFA-201ENST00000230480 TMEM258P61165 79 aa8.11□□□□□ -1.11
VEGFA-201ENST00000230480 KRTAP13-2Q52LG2 175 aa8.11□□□□□ -1.11
VEGFA-201ENST00000230480 GAGE2AQ6NT46 116 aa8.11□□□□□ -1.11
VEGFA-201ENST00000230480 NPC2P61916 151 aa8.1□□□□□ -1.11
VEGFA-201ENST00000230480 NDUFC2O95298 119 aa8.09□□□□□ -1.11
VEGFA-201ENST00000230480 IGLV6-57P01721 117 aa8.09□□□□□ -1.11
VEGFA-201ENST00000230480 FAM19A1Q7Z5A9 133 aa8.09□□□□□ -1.11
VEGFA-201ENST00000230480 LPAP08519 4548 aa8.07□□□□□ -1.12
VEGFA-201ENST00000230480 H0YGX0 51 aa8.07□□□□□ -1.12
VEGFA-201ENST00000230480 PRYO14603 147 aa8.07□□□□□ -1.12
VEGFA-201ENST00000230480 DNAL4O96015 105 aa8.07□□□□□ -1.12
VEGFA-201ENST00000230480 UBE2AP49459 152 aa8.07□□□□□ -1.12
VEGFA-201ENST00000230480 OBSCN-AS1Q96MR7 158 aa8.07□□□□□ -1.12
VEGFA-201ENST00000230480 LINC00337Q8N6G1 96 aa8.06□□□□□ -1.12
VEGFA-201ENST00000230480 SERP2Q8N6R1 65 aa8.06□□□□□ -1.12
VEGFA-201ENST00000230480 ERC2-IT1O76042 136 aa8.05□□□□□ -1.12
VEGFA-201ENST00000230480 S100A7L2Q5SY68 101 aa8.05□□□□□ -1.12
VEGFA-201ENST00000230480 ATP5EP2Q5VTU8 51 aa8.05□□□□□ -1.12
VEGFA-201ENST00000230480 Q9BRP9 147 aa8.03□□□□□ -1.12
VEGFA-201ENST00000230480 SPRR4Q96PI1 79 aa8.02□□□□□ -1.13
VEGFA-201ENST00000230480 RNF213Q63HN8 5207 aa8.01□□□□□ -1.13
VEGFA-201ENST00000230480 FAM229BQ4G0N7 80 aa8.01□□□□□ -1.13
VEGFA-201ENST00000230480 FAM218AQ96MZ4 157 aa8.01□□□□□ -1.13
VEGFA-201ENST00000230480 HIGD2AQ9BW72 106 aa8.01□□□□□ -1.13
VEGFA-201ENST00000230480 hADV29S1A0JD25 119 aa7.99□□□□□ -1.13
VEGFA-201ENST00000230480 Q6ZRX8 168 aa7.97□□□□□ -1.13
VEGFA-201ENST00000230480 TRAV23DV6A0A075B6W5 121 aa7.96□□□□□ -1.14
VEGFA-201ENST00000230480 ETDCA0A1B0GVM5 59 aa7.96□□□□□ -1.14
VEGFA-201ENST00000230480 JMJD7-PLA2G4BH0Y9G9 81 aa7.96□□□□□ -1.14
VEGFA-201ENST00000230480 ZNF73O43830 326 aaPredicted RBP7.96□□□□□ -1.14
VEGFA-201ENST00000230480 LINC00483Q53H64 154 aa7.96□□□□□ -1.14
VEGFA-201ENST00000230480 TYMSOSQ8TAI1 123 aa7.95□□□□□ -1.14
VEGFA-201ENST00000230480 CCKP06307 115 aa7.94□□□□□ -1.14
VEGFA-201ENST00000230480 SMIM11BQ8TCY0 68 aa7.94□□□□□ -1.14
VEGFA-201ENST00000230480 LINC00846Q9NV44 126 aa7.94□□□□□ -1.14
VEGFA-201ENST00000230480 ORMDL1Q9P0S3 153 aa7.94□□□□□ -1.14
VEGFA-201ENST00000230480 ST20-AS1Q8NBB2 130 aa7.93□□□□□ -1.14
VEGFA-201ENST00000230480 C14orf132Q9NPU4 83 aa7.93□□□□□ -1.14
VEGFA-201ENST00000230480 IGKV3D-7A0A0C4DH55 119 aa7.92□□□□□ -1.14
VEGFA-201ENST00000230480 H3BQ85 93 aa7.89□□□□□ -1.15
VEGFA-201ENST00000230480 C6orf99Q4VX62 202 aa7.89□□□□□ -1.15
VEGFA-201ENST00000230480 ELOF1P60002 83 aaKnown RBP7.88□□□□□ -1.15
VEGFA-201ENST00000230480 LINC00304Q8N9R0 145 aa7.88□□□□□ -1.15
VEGFA-201ENST00000230480 TMEM256-PLSCR3K7ERE1 68 aa7.87□□□□□ -1.15
VEGFA-201ENST00000230480 GHRHP01286 108 aa7.87□□□□□ -1.15
VEGFA-201ENST00000230480 C4orf48Q5BLP8 95 aa7.87□□□□□ -1.15
VEGFA-201ENST00000230480 FAM236DA0A1B0GTK5 79 aa7.86□□□□□ -1.15
VEGFA-201ENST00000230480 FAM236CP0DP71 79 aa7.86□□□□□ -1.15
VEGFA-201ENST00000230480 SPRR1BP22528 89 aa7.86□□□□□ -1.15
VEGFA-201ENST00000230480 LINC01547P58512 204 aaPredicted RBP7.86□□□□□ -1.15
VEGFA-201ENST00000230480 UBL5Q9BZL1 73 aa7.86□□□□□ -1.15
VEGFA-201ENST00000230480 CYSTM1Q9H1C7 97 aa7.86□□□□□ -1.15
VEGFA-201ENST00000230480 ZNF706Q9Y5V0 76 aaPredicted RBP7.86□□□□□ -1.15
VEGFA-201ENST00000230480 SERP1Q9Y6X1 66 aa7.86□□□□□ -1.15
VEGFA-201ENST00000230480 TRAV7A0A075B6U4 112 aa7.85□□□□□ -1.15
VEGFA-201ENST00000230480 Q5XG85 94 aa7.85□□□□□ -1.15
VEGFA-201ENST00000230480 DSCR8Q96T75 97 aa7.85□□□□□ -1.15
VEGFA-201ENST00000230480 A0A087WVE0 104 aa7.84□□□□□ -1.15
VEGFA-201ENST00000230480 COX7BP24311 80 aa7.84□□□□□ -1.15
VEGFA-201ENST00000230480 Q8NBF4 154 aa7.84□□□□□ -1.15
VEGFA-201ENST00000230480 RETNLBQ9BQ08 111 aa7.84□□□□□ -1.15
VEGFA-201ENST00000230480 LOC110117498A0A087WWA1 95 aa7.83□□□□□ -1.16
VEGFA-201ENST00000230480 TRBV7-6A0A0J9YX20 115 aa7.83□□□□□ -1.16
VEGFA-201ENST00000230480 ATP5EP56381 51 aaPredicted RBP7.83□□□□□ -1.16
VEGFA-201ENST00000230480 MUC17Q685J3 4493 aa7.82□□□□□ -1.16
VEGFA-201ENST00000230480 PDE6GP18545 87 aa7.82□□□□□ -1.16
VEGFA-201ENST00000230480 SMIM29Q86T20 159 aa7.82□□□□□ -1.16
VEGFA-201ENST00000230480 NDUFC1O43677 76 aa7.8□□□□□ -1.16
VEGFA-201ENST00000230480 KLKP1Q107X0 134 aa7.8□□□□□ -1.16
VEGFA-201ENST00000230480 MOBPQ13875 183 aa7.8□□□□□ -1.16
VEGFA-201ENST00000230480 PRR4Q16378 134 aa7.8□□□□□ -1.16
VEGFA-201ENST00000230480 DHRS4-AS1Q9P1J3 65 aa7.8□□□□□ -1.16
VEGFA-201ENST00000230480 IGLV9-49A0A0B4J1Y8 123 aa7.79□□□□□ -1.16
VEGFA-201ENST00000230480 SSBP3-AS1Q7Z2R9 100 aa7.79□□□□□ -1.16
VEGFA-201ENST00000230480 IGLV5-48A0A075B6I7 105 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms