RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 Q5W150 140 aa9.1□□□□□ -0.95
UBR5-201ENST00000220959 ITPR3Q14573 2671 aa9.09□□□□□ -0.95
UBR5-201ENST00000220959 PLAC4Q8WY50 150 aa9.08□□□□□ -0.96
UBR5-201ENST00000220959 ASB16-AS1Q495Z4 193 aa9.08□□□□□ -0.96
UBR5-201ENST00000220959 Q5VSD8 79 aa9.05□□□□□ -0.96
UBR5-201ENST00000220959 FLNAP21333 2647 aaKnown RBP9.04□□□□□ -0.96
UBR5-201ENST00000220959 HELZ2Q9BYK8 2649 aaKnown RBP9.03□□□□□ -0.96
UBR5-201ENST00000220959 PRAC1Q96KF2 57 aa9.03□□□□□ -0.96
UBR5-201ENST00000220959 RPL37P61927 97 aaKnown RBP9.03□□□□□ -0.96
UBR5-201ENST00000220959 M0QZ58 72 aa9.01□□□□□ -0.97
UBR5-201ENST00000220959 H1FX-AS1Q4G0G2 97 aa9.01□□□□□ -0.97
UBR5-201ENST00000220959 SPRR1AP35321 89 aa9.01□□□□□ -0.97
UBR5-201ENST00000220959 ROMO1P60602 79 aa9.01□□□□□ -0.97
UBR5-201ENST00000220959 GCN1Q92616 2671 aaKnown RBP9.01□□□□□ -0.97
UBR5-201ENST00000220959 COL6A5A8TX70 2615 aa9□□□□□ -0.97
UBR5-201ENST00000220959 Q5XG85 94 aa9□□□□□ -0.97
UBR5-201ENST00000220959 GOLGB1Q14789 3259 aaKnown RBP9□□□□□ -0.97
UBR5-201ENST00000220959 LINC00472Q9H8W2 130 aa8.98□□□□□ -0.97
UBR5-201ENST00000220959 CHD6Q8TD26 2715 aa8.96□□□□□ -0.98
UBR5-201ENST00000220959 UNC79Q9P2D8 2635 aa8.96□□□□□ -0.98
UBR5-201ENST00000220959 SPRR1BP22528 89 aa8.94□□□□□ -0.98
UBR5-201ENST00000220959 Q5VV11 94 aa8.94□□□□□ -0.98
UBR5-201ENST00000220959 FLNBO75369 2602 aaKnown RBP8.94□□□□□ -0.98
UBR5-201ENST00000220959 OXTP01178 125 aa8.9□□□□□ -0.98
UBR5-201ENST00000220959 ADM2Q7Z4H4 148 aa8.9□□□□□ -0.98
UBR5-201ENST00000220959 NSD1Q96L73 2696 aaPredicted RBP8.9□□□□□ -0.99
UBR5-201ENST00000220959 Q8NDZ9 215 aa8.89□□□□□ -0.99
UBR5-201ENST00000220959 FP248Q71RG6 208 aaPredicted RBP8.88□□□□□ -0.99
UBR5-201ENST00000220959 KRTAP10-1P60331 282 aa8.87□□□□□ -0.99
UBR5-201ENST00000220959 LCE6AA0A183 80 aa8.86□□□□□ -0.99
UBR5-201ENST00000220959 KRTAP26-1Q6PEX3 210 aa8.85□□□□□ -0.99
UBR5-201ENST00000220959 C5orf42Q9H799 3197 aa8.82□□□□□ -1
UBR5-201ENST00000220959 TEP1Q99973 2627 aaKnown RBP8.82□□□□□ -1
UBR5-201ENST00000220959 KRTAP10-2P60368 255 aa8.81□□□□□ -1
UBR5-201ENST00000220959 CEP350Q5VT06 3117 aa8.8□□□□□ -1
UBR5-201ENST00000220959 DNAH12Q6ZR08 3092 aa8.79□□□□□ -1
UBR5-201ENST00000220959 Q6ZR54 194 aa8.78□□□□□ -1
UBR5-201ENST00000220959 KRTAP1-5Q9BYS1 174 aa8.78□□□□□ -1
UBR5-201ENST00000220959 SPATA8Q6RVD6 105 aa8.78□□□□□ -1
UBR5-201ENST00000220959 CYSTM1Q9H1C7 97 aa8.77□□□□□ -1.01
UBR5-201ENST00000220959 TEX15Q9BXT5 2789 aa8.76□□□□□ -1.01
UBR5-201ENST00000220959 KMT2BQ9UMN6 2715 aaPredicted RBP8.74□□□□□ -1.01
UBR5-201ENST00000220959 PANO1I0J062 215 aa8.69□□□□□ -1.02
UBR5-201ENST00000220959 ITPR2Q14571 2701 aa8.68□□□□□ -1.02
UBR5-201ENST00000220959 C20orf166-AS1Q96NR2 134 aa8.67□□□□□ -1.02
UBR5-201ENST00000220959 UTP20O75691 2785 aaKnown RBP8.65□□□□□ -1.02
UBR5-201ENST00000220959 IGSF10Q6WRI0 2623 aa8.65□□□□□ -1.02
UBR5-201ENST00000220959 A0A087X002 238 aa8.64□□□□□ -1.03
UBR5-201ENST00000220959 APCP25054 2843 aa8.62□□□□□ -1.03
UBR5-201ENST00000220959 A8MUU9 505 aa8.62□□□□□ -1.03
UBR5-201ENST00000220959 KRTAP25-1Q3LHN0 102 aa8.56□□□□□ -1.04
UBR5-201ENST00000220959 NDUFAF8A1L188 74 aa8.55□□□□□ -1.04
UBR5-201ENST00000220959 MAP1AP78559 2803 aaPredicted RBP8.54□□□□□ -1.04
UBR5-201ENST00000220959 KRTAP4-16G5E9R7 235 aaPredicted RBP8.54□□□□□ -1.04
UBR5-201ENST00000220959 KRTAP29-1A8MX34 341 aaPredicted RBP8.53□□□□□ -1.04
UBR5-201ENST00000220959 RPS29P62273 56 aaKnown RBP8.5□□□□□ -1.05
UBR5-201ENST00000220959 NOTCH2NLQ7Z3S9 236 aa8.48□□□□□ -1.05
UBR5-201ENST00000220959 A8MU10 97 aa8.46□□□□□ -1.05
UBR5-201ENST00000220959 SETXQ7Z333 2677 aaKnown RBP8.46□□□□□ -1.06
UBR5-201ENST00000220959 A6NN06 94 aa8.46□□□□□ -1.06
UBR5-201ENST00000220959 UTRNP46939 3433 aa8.45□□□□□ -1.06
UBR5-201ENST00000220959 TNP1P09430 55 aa8.45□□□□□ -1.06
UBR5-201ENST00000220959 CFAP54Q96N23 3096 aa8.43□□□□□ -1.06
UBR5-201ENST00000220959 PCNTO95613 3336 aa8.41□□□□□ -1.06
UBR5-201ENST00000220959 A0A0C4DFX4 3053 aa8.4□□□□□ -1.06
UBR5-201ENST00000220959 ITPR1Q14643 2758 aa8.39□□□□□ -1.07
UBR5-201ENST00000220959 ZNF292O60281 2723 aa8.36□□□□□ -1.07
UBR5-201ENST00000220959 UBR5O95071 2799 aaPredicted RBP8.34□□□□□ -1.07
UBR5-201ENST00000220959 KRTAP11-1Q8IUC1 163 aa8.32□□□□□ -1.08
UBR5-201ENST00000220959 C10orf95Q9H7T3 257 aa8.32□□□□□ -1.08
UBR5-201ENST00000220959 NBEAL2Q6ZNJ1 2754 aa8.26□□□□□ -1.09
UBR5-201ENST00000220959 Q6ZRN7 208 aaPredicted RBP8.26□□□□□ -1.09
UBR5-201ENST00000220959 KRTAP13-2Q52LG2 175 aa8.25□□□□□ -1.09
UBR5-201ENST00000220959 KRTAP10-8P60410 259 aa8.2□□□□□ -1.1
UBR5-201ENST00000220959 PP632Q6XCG6 107 aa8.18□□□□□ -1.1
UBR5-201ENST00000220959 LRBAP50851 2863 aa8.17□□□□□ -1.1
UBR5-201ENST00000220959 MGAQ8IWI9 3026 aa8.15□□□□□ -1.1
UBR5-201ENST00000220959 LAMA2P24043 3122 aaKnown RBP8.14□□□□□ -1.11
UBR5-201ENST00000220959 CHD7Q9P2D1 2997 aa8.14□□□□□ -1.11
UBR5-201ENST00000220959 KRTAP7-1Q8IUC3 87 aa8.14□□□□□ -1.11
UBR5-201ENST00000220959 KRTAP13-1Q8IUC0 172 aa8.13□□□□□ -1.11
UBR5-201ENST00000220959 MKI67P46013 3256 aaKnown RBP8.1□□□□□ -1.11
UBR5-201ENST00000220959 TRIOO75962 3097 aa8.09□□□□□ -1.11
UBR5-201ENST00000220959 A0A1B0GVY2 172 aa8.07□□□□□ -1.12
UBR5-201ENST00000220959 TENM3Q9P273 2699 aa8.06□□□□□ -1.12
UBR5-201ENST00000220959 FRYQ5TBA9 3013 aa8.06□□□□□ -1.12
UBR5-201ENST00000220959 FREM2Q5SZK8 3169 aa8.05□□□□□ -1.12
UBR5-201ENST00000220959 TRANK1O15050 2925 aa8.03□□□□□ -1.12
UBR5-201ENST00000220959 DSPP15924 2871 aaKnown RBP8.02□□□□□ -1.13
UBR5-201ENST00000220959 UNC80Q8N2C7 3258 aa8.02□□□□□ -1.13
UBR5-201ENST00000220959 CHD9Q3L8U1 2897 aa8.01□□□□□ -1.13
UBR5-201ENST00000220959 CELSR3Q9NYQ7 3312 aa8.01□□□□□ -1.13
UBR5-201ENST00000220959 WDFY4Q6ZS81 3184 aa7.97□□□□□ -1.13
UBR5-201ENST00000220959 PRO2289Q9P1D8 64 aa7.97□□□□□ -1.13
UBR5-201ENST00000220959 XIRP2A4UGR9 3374 aa7.96□□□□□ -1.13
UBR5-201ENST00000220959 KRTAP21-3Q3LHN1 58 aa7.96□□□□□ -1.14
UBR5-201ENST00000220959 KRTAP10-10P60014 251 aa7.94□□□□□ -1.14
UBR5-201ENST00000220959 REV3LO60673 3130 aa7.93□□□□□ -1.14
UBR5-201ENST00000220959 XP32Q5T750 250 aa7.92□□□□□ -1.14
UBR5-201ENST00000220959 PRUNE2Q8WUY3 3088 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms