RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 LORP23490 312 aaPredicted RBP2.65□□□□□ -1.99
CFTR-201ENST00000003084 CR1P17927 2039 aa2.65□□□□□ -1.99
CFTR-201ENST00000003084 NOTCH2Q04721 2471 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 MGAQ8IWI9 3026 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 FAM104AQ969W3 186 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 A0A1W2PNM2 257 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 COA5Q86WW8 74 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 TACC2O95359 2948 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 CELSR1Q9NYQ6 3014 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 LINC01600Q96MT4 127 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 NOTCH3Q9UM47 2321 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 CSMD2Q7Z408 3487 aa2.63□□□□□ -1.99
CFTR-201ENST00000003084 Q6ZSA8 131 aa2.63□□□□□ -1.99
CFTR-201ENST00000003084 CCDC168Q8NDH2 2452 aa2.63□□□□□ -1.99
CFTR-201ENST00000003084 SPRR1AP35321 89 aa2.63□□□□□ -1.99
CFTR-201ENST00000003084 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
CFTR-201ENST00000003084 CYP4F30PQ9H0H9 118 aa2.62□□□□□ -1.99
CFTR-201ENST00000003084 ANKRD17O75179 2603 aaKnown RBP2.62□□□□□ -1.99
CFTR-201ENST00000003084 SPRR1BP22528 89 aa2.62□□□□□ -1.99
CFTR-201ENST00000003084 Q75L30 129 aa2.62□□□□□ -1.99
CFTR-201ENST00000003084 SPANXA2-OT1Q8N9U9 137 aa2.62□□□□□ -1.99
CFTR-201ENST00000003084 LRRK2Q5S007 2527 aa2.62□□□□□ -1.99
CFTR-201ENST00000003084 A8MUN3 132 aa2.62□□□□□ -1.99
CFTR-201ENST00000003084 Q5VSD8 79 aa2.61□□□□□ -1.99
CFTR-201ENST00000003084 A0A0G2JQZ4 141 aa2.61□□□□□ -1.99
CFTR-201ENST00000003084 PKD1L2Q7Z442 2459 aa2.61□□□□□ -1.99
CFTR-201ENST00000003084 ANKRD11Q6UB99 2663 aaPredicted RBP2.61□□□□□ -1.99
CFTR-201ENST00000003084 KRTAP26-1Q6PEX3 210 aa2.61□□□□□ -1.99
CFTR-201ENST00000003084 MT3P25713 68 aa2.61□□□□□ -1.99
CFTR-201ENST00000003084 KLKP1Q107X0 134 aa2.61□□□□□ -1.99
CFTR-201ENST00000003084 ABCA2Q9BZC7 2435 aa2.61□□□□□ -1.99
CFTR-201ENST00000003084 MUC4Q99102 2169 aa2.61□□□□□ -1.99
CFTR-201ENST00000003084 OXTP01178 125 aa2.6□□□□□ -1.99
CFTR-201ENST00000003084 UQCR11O14957 56 aa2.6□□□□□ -1.99
CFTR-201ENST00000003084 Q6ZR54 194 aa2.6□□□□□ -1.99
CFTR-201ENST00000003084 KRTAP10-1P60331 282 aa2.59□□□□□ -1.99
CFTR-201ENST00000003084 KRTAP1-5Q9BYS1 174 aa2.59□□□□□ -1.99
CFTR-201ENST00000003084 FP248Q71RG6 208 aaPredicted RBP2.59□□□□□ -2
CFTR-201ENST00000003084 LCE2AQ5TA79 106 aaPredicted RBP2.59□□□□□ -2
CFTR-201ENST00000003084 ZCCHC13Q8WW36 166 aaKnown RBP2.59□□□□□ -2
CFTR-201ENST00000003084 PRRC2CQ9Y520 2896 aaKnown RBP2.58□□□□□ -2
CFTR-201ENST00000003084 NBPF19A0A087WUL8 3843 aa2.58□□□□□ -2
CFTR-201ENST00000003084 SONP18583 2426 aaKnown RBP2.58□□□□□ -2
CFTR-201ENST00000003084 BSNQ9UPA5 3926 aa2.58□□□□□ -2
CFTR-201ENST00000003084 MIR22HGQ0VDD5 57 aa2.57□□□□□ -2
CFTR-201ENST00000003084 COL12A1Q99715 3063 aa2.57□□□□□ -2
CFTR-201ENST00000003084 KRTAP10-2P60368 255 aa2.57□□□□□ -2
CFTR-201ENST00000003084 CEP295Q9C0D2 2601 aa2.57□□□□□ -2
CFTR-201ENST00000003084 CELSR2Q9HCU4 2923 aa2.56□□□□□ -2
CFTR-201ENST00000003084 CUBNO60494 3623 aa2.56□□□□□ -2
CFTR-201ENST00000003084 MMP24-AS1A0A0U1RRL7 71 aa2.55□□□□□ -2
CFTR-201ENST00000003084 HRES1P13985 223 aa2.55□□□□□ -2
CFTR-201ENST00000003084 S4R3F8 94 aa2.55□□□□□ -2
CFTR-201ENST00000003084 ABCA12Q86UK0 2595 aa2.55□□□□□ -2
CFTR-201ENST00000003084 RPS29P62273 56 aaKnown RBP2.55□□□□□ -2
CFTR-201ENST00000003084 OTOGQ6ZRI0 2925 aa2.55□□□□□ -2
CFTR-201ENST00000003084 Q8NDZ9 215 aa2.55□□□□□ -2
CFTR-201ENST00000003084 H7BZZ5 65 aa2.54□□□□□ -2
CFTR-201ENST00000003084 M0R2T5 61 aa2.54□□□□□ -2
CFTR-201ENST00000003084 CRIPTQ9P021 101 aa2.54□□□□□ -2
CFTR-201ENST00000003084 MYO18BQ8IUG5 2567 aa2.54□□□□□ -2
CFTR-201ENST00000003084 LINC00472Q9H8W2 130 aa2.54□□□□□ -2
CFTR-201ENST00000003084 VPS13CQ709C8 3753 aa2.54□□□□□ -2
CFTR-201ENST00000003084 CSAG1Q6PB30 78 aa2.53□□□□□ -2
CFTR-201ENST00000003084 KRTAP16-1A8MUX0 517 aa2.53□□□□□ -2
CFTR-201ENST00000003084 NIPBLQ6KC79 2804 aaeCLIP2.53□□□□□ -2
CFTR-201ENST00000003084 LCA10Q71F78 164 aa2.53□□□□□ -2
CFTR-201ENST00000003084 FASNP49327 2511 aaKnown RBP2.53□□□□□ -2.01
CFTR-201ENST00000003084 Q6ZRN7 208 aaPredicted RBP2.52□□□□□ -2.01
CFTR-201ENST00000003084 SPTBN4Q9H254 2564 aa2.52□□□□□ -2.01
CFTR-201ENST00000003084 F8P00451 2351 aa2.52□□□□□ -2.01
CFTR-201ENST00000003084 CDC42SE1Q9NRR8 79 aa2.52□□□□□ -2.01
CFTR-201ENST00000003084 KRTAP4-16G5E9R7 235 aaPredicted RBP2.51□□□□□ -2.01
CFTR-201ENST00000003084 CHD8Q9HCK8 2581 aa2.51□□□□□ -2.01
CFTR-201ENST00000003084 Q5W150 140 aa2.51□□□□□ -2.01
CFTR-201ENST00000003084 PLAC4Q8WY50 150 aa2.51□□□□□ -2.01
CFTR-201ENST00000003084 USP9XQ93008 2570 aaPredicted RBP2.51□□□□□ -2.01
CFTR-201ENST00000003084 CRYBG3Q68DQ2 2970 aa2.51□□□□□ -2.01
CFTR-201ENST00000003084 ASB16-AS1Q495Z4 193 aa2.51□□□□□ -2.01
CFTR-201ENST00000003084 JMJD1CQ15652 2540 aa2.5□□□□□ -2.01
CFTR-201ENST00000003084 SPINK7P58062 85 aa2.5□□□□□ -2.01
CFTR-201ENST00000003084 AKAP9Q99996 3911 aa2.5□□□□□ -2.01
CFTR-201ENST00000003084 Q1T7F1 81 aa2.49□□□□□ -2.01
CFTR-201ENST00000003084 FN1P02751 2386 aaKnown RBP2.49□□□□□ -2.01
CFTR-201ENST00000003084 KRTAP29-1A8MX34 341 aaPredicted RBP2.49□□□□□ -2.01
CFTR-201ENST00000003084 DMAC1Q96GE9 116 aa2.49□□□□□ -2.01
CFTR-201ENST00000003084 A0A1B0GU33 70 aa2.49□□□□□ -2.01
CFTR-201ENST00000003084 A0A0D9SG42 100 aa2.49□□□□□ -2.01
CFTR-201ENST00000003084 PANO1I0J062 215 aa2.49□□□□□ -2.01
CFTR-201ENST00000003084 AKAP13Q12802 2813 aa2.48□□□□□ -2.01
CFTR-201ENST00000003084 C2CD3Q4AC94 2353 aa2.48□□□□□ -2.01
CFTR-201ENST00000003084 MYO9AB2RTY4 2548 aa2.48□□□□□ -2.01
CFTR-201ENST00000003084 TLN2Q9Y4G6 2542 aa2.48□□□□□ -2.01
CFTR-201ENST00000003084 Q8N9P0 234 aaPredicted RBP2.48□□□□□ -2.01
CFTR-201ENST00000003084 Q5XG85 94 aa2.48□□□□□ -2.01
CFTR-201ENST00000003084 POLQO75417 2590 aa2.47□□□□□ -2.01
CFTR-201ENST00000003084 LINC01558Q9Y6Z2 57 aa2.47□□□□□ -2.01
CFTR-201ENST00000003084 USP9YO00507 2555 aaPredicted RBP2.46□□□□□ -2.02
CFTR-201ENST00000003084 ZFYVE26Q68DK2 2539 aa2.46□□□□□ -2.02
CFTR-201ENST00000003084 KRTAP11-1Q8IUC1 163 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms