RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Igkv19-93A0A0G2JFZ3 115 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Igfbpl1Q80W15 270 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 IcosQ9WVS0 200 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Prr12E9PYL2 2035 aaKnown RBP8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Tmem141A2AJB2 108 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Gm16686Q3UMN9 131 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Olfr1373Q7TQT6 311 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Ttc9cQ810A3 171 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Tmem190Q9D2E9 166 aa8.06□□□□□ -1.12
Ldlr-201ENSMUST00000034713 PkdrejQ9Z0T6 2126 aa8.05□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Olfr1209Q3SXJ3 310 aa8.05□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Tmem101Q91VP7 257 aa8.05□□□□□ -1.12
Ldlr-201ENSMUST00000034713 4931428L18RikQ9D4S9 127 aa8.05□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Gm10020E9QAZ2 204 aa8.05□□□□□ -1.12
Ldlr-201ENSMUST00000034713 TcraP01849 138 aa8.05□□□□□ -1.12
Ldlr-201ENSMUST00000034713 D130052B06RikQ3UW13 202 aa8.05□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Ndufc2Q9CQ54 120 aa8.05□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Rpl15Q9CZM2 204 aaKnown RBP8.05□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Crim1Q9JLL0 1037 aa8.05□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Igkv5-37A0A140T8N4 115 aa8.05□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Gm20517G3UVU6 152 aa8.05□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Gm10775Q3V290 127 aa8.05□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Dmrtc2Q8CGW9 370 aa8.05□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Rnase6Q9D244 153 aa8.05□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Ighv8-6A0A0A6YXA3 118 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 PdpnQ62011 172 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Hapln4Q80WM4 400 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 OtoglF7A4A7 2325 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Trav6d-7A0A075B6B0 112 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Thap8E9Q695 213 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 P0C1Z5 52 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Olfr1381Q7TQT4 311 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 RetnQ99P87 114 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Oxld1Q9CR10 201 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Gm15080A2BI02 449 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Slc25a48Q8BW66 306 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Gtsf1lQ9CWD0 151 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Gm37388A0A0A6YY46 143 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Gm19684G3UZ45 117 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 P01726 129 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Cd69P37217 199 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 BC106179Q8C9L1 186 aa8.04□□□□□ -1.12
Ldlr-201ENSMUST00000034713 NbasE9Q411 2356 aa8.03□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Mzt1Q8BUR9 78 aa8.03□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Mrpl53Q9D1H8 118 aaKnown RBP8.03□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Gtsf1Q9DAN6 167 aa8.03□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Timm23Q9WTQ8 209 aa8.03□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Notch4P31695 1964 aa8.03□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Tln1P26039 2541 aaKnown RBP8.03□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Gm5129F6YHA9 99 aa8.03□□□□□ -1.12
Ldlr-201ENSMUST00000034713 CrxO54751 299 aa8.03□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Defa2P28309 93 aa8.03□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Cks1bP61025 79 aa8.03□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Olfr322Q5NCC8 327 aa8.03□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Dmrt3Q80WT2 476 aa8.03□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Pcnx3Q8VI59 2028 aa8.03□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Cdkn1aP39689 159 aa8.03□□□□□ -1.12
Ldlr-201ENSMUST00000034713 9130213A22RikQ3V3T2 120 aa8.03□□□□□ -1.12
Ldlr-201ENSMUST00000034713 AcacbE9Q4Z2 2448 aa8.03□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Trav7-5A0A0G2JFX6 112 aa8.02□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Spint3Q3UW09 88 aa8.02□□□□□ -1.12
Ldlr-201ENSMUST00000034713 TdhQ8K3F7 373 aa8.02□□□□□ -1.12
Ldlr-201ENSMUST00000034713 CklfQ9DAS1 152 aa8.02□□□□□ -1.12
Ldlr-201ENSMUST00000034713 Zfp950A0A0U1RQ46 609 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 P01649 108 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Tdgf1P51865 171 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Gm10192Q3V0S1 108 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Olfr211Q8VGH2 309 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Tm4sf20Q9CQY8 226 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Cspg4Q8VHY0 2327 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Wnk1P83741 2377 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Ighv1-19A0A0A6YWX0 117 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Gm6793B2RXM2 351 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Tmem95P0DJF3 176 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Spsb3Q571F5 354 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Gm45521A0A1B0GRK0 198 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Vmn1r1E9PVR6 306 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 P01790 122 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Plscr4P58196 326 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Sumo2P61957 95 aaKnown RBP8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Fam110aQ8R184 296 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 OtosQ8R448 89 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Ifitm2Q99J93 144 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Mrpl36Q99N90 102 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Obox1Q9D350 204 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Gm26938S4R185 226 aa8.02□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Trav21-dv12A0A075B6C4 109 aa8.01□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Hint1P70349 126 aaKnown RBP8.01□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Pygo1Q9D0P5 417 aa8.01□□□□□ -1.13
Ldlr-201ENSMUST00000034713 PtprsB0V2N1 1907 aa8.01□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Tmem238A9JSM3 176 aa8.01□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Gm6034E9Q101 117 aa8.01□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Gsx1P31315 261 aa8.01□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Mob4Q6PEB6 225 aa8.01□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Morn3Q8C5T4 241 aa8.01□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Q9D727 114 aa8.01□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Tet2Q4JK59 1912 aaKnown RBP8.01□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Trav12-3A0A075B648 115 aa8.01□□□□□ -1.13
Ldlr-201ENSMUST00000034713 B1ARW8 110 aa8.01□□□□□ -1.13
Ldlr-201ENSMUST00000034713 Gm15091B1AZM2 449 aa8.01□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 34.1 ms