RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 ANKRD11Q6UB99 2663 aaPredicted RBP12.9□□□□□ -0.34
KCNMA1-293ENST00000640969 PLA2G2DQ9UNK4 145 aa12.87□□□□□ -0.35
KCNMA1-293ENST00000640969 K7EIL1 84 aa12.87□□□□□ -0.35
KCNMA1-293ENST00000640969 LINC00336Q6ZUF6 198 aa12.87□□□□□ -0.35
KCNMA1-293ENST00000640969 ANAPC11Q9NYG5 84 aa12.86□□□□□ -0.35
KCNMA1-293ENST00000640969 TLX1NBP0CAT3 122 aa12.86□□□□□ -0.35
KCNMA1-293ENST00000640969 C19orf73Q9NVV2 129 aa12.85□□□□□ -0.35
KCNMA1-293ENST00000640969 GIG44P09565 113 aaPredicted RBP12.84□□□□□ -0.35
KCNMA1-293ENST00000640969 USP9YO00507 2555 aaPredicted RBP12.84□□□□□ -0.35
KCNMA1-293ENST00000640969 WDR87Q6ZQQ6 2873 aa12.83□□□□□ -0.36
KCNMA1-293ENST00000640969 A0A087WTM6 91 aa12.83□□□□□ -0.36
KCNMA1-293ENST00000640969 SRCAPQ6ZRS2 3230 aa12.82□□□□□ -0.36
KCNMA1-293ENST00000640969 EP400Q96L91 3159 aa12.82□□□□□ -0.36
KCNMA1-293ENST00000640969 PCSK5Q92824 1860 aa12.82□□□□□ -0.36
KCNMA1-293ENST00000640969 ZNF462Q96JM2 2506 aa12.81□□□□□ -0.36
KCNMA1-293ENST00000640969 LINC00612Q8N6U2 182 aa12.8□□□□□ -0.36
KCNMA1-293ENST00000640969 SPTBN4Q9H254 2564 aa12.8□□□□□ -0.36
KCNMA1-293ENST00000640969 KTN1-AS1Q86SY8 53 aa12.79□□□□□ -0.36
KCNMA1-293ENST00000640969 C9orf163Q8N9P6 203 aa12.78□□□□□ -0.36
KCNMA1-293ENST00000640969 CD164Q04900 197 aa12.78□□□□□ -0.36
KCNMA1-293ENST00000640969 KRTAP10-3P60369 221 aa12.78□□□□□ -0.36
KCNMA1-293ENST00000640969 SETD2Q9BYW2 2564 aaPredicted RBP12.77□□□□□ -0.36
KCNMA1-293ENST00000640969 IGLV5-37A0A075B6J1 123 aa12.77□□□□□ -0.36
KCNMA1-293ENST00000640969 IGLV7-43P04211 117 aa12.77□□□□□ -0.36
KCNMA1-293ENST00000640969 A0A1W2PNM2 257 aa12.76□□□□□ -0.37
KCNMA1-293ENST00000640969 SMR3BP02814 79 aaPredicted RBP12.76□□□□□ -0.37
KCNMA1-293ENST00000640969 FASNP49327 2511 aaKnown RBP12.75□□□□□ -0.37
KCNMA1-293ENST00000640969 SPRR4Q96PI1 79 aa12.75□□□□□ -0.37
KCNMA1-293ENST00000640969 FAM104AQ969W3 186 aa12.74□□□□□ -0.37
KCNMA1-293ENST00000640969 LCA10Q71F78 164 aa12.74□□□□□ -0.37
KCNMA1-293ENST00000640969 A0A0D9SG42 100 aa12.73□□□□□ -0.37
KCNMA1-293ENST00000640969 PSORS1C2Q9UIG4 136 aa12.73□□□□□ -0.37
KCNMA1-293ENST00000640969 CASC10Q5T4H9 136 aa12.73□□□□□ -0.37
KCNMA1-293ENST00000640969 SPANXA2-OT1Q8N9U9 137 aa12.72□□□□□ -0.37
KCNMA1-293ENST00000640969 CDC42SE1Q9NRR8 79 aa12.72□□□□□ -0.37
KCNMA1-293ENST00000640969 Q8N1X5 172 aa12.72□□□□□ -0.37
KCNMA1-293ENST00000640969 PKD1L2Q7Z442 2459 aa12.71□□□□□ -0.37
KCNMA1-293ENST00000640969 LINC01554Q52M75 96 aa12.7□□□□□ -0.38
KCNMA1-293ENST00000640969 IGLV5-48A0A075B6I7 105 aa12.69□□□□□ -0.38
KCNMA1-293ENST00000640969 RBM12B-AS1Q9P1G2 102 aa12.69□□□□□ -0.38
KCNMA1-293ENST00000640969 A0A096LNT2 108 aa12.68□□□□□ -0.38
KCNMA1-293ENST00000640969 CNBPP62633 177 aaKnown RBP12.65□□□□□ -0.38
KCNMA1-293ENST00000640969 ZNF575Q86XF7 245 aa12.6□□□□□ -0.39
KCNMA1-293ENST00000640969 MTORP42345 2549 aa12.58□□□□□ -0.4
KCNMA1-293ENST00000640969 ANKRD17O75179 2603 aaKnown RBP12.54□□□□□ -0.4
KCNMA1-293ENST00000640969 OCR1Q9BZK8 76 aa12.52□□□□□ -0.4
KCNMA1-293ENST00000640969 PRR26Q8N8Z3 221 aa12.51□□□□□ -0.41
KCNMA1-293ENST00000640969 Q1T7F1 81 aa12.5□□□□□ -0.41
KCNMA1-293ENST00000640969 CENPFP49454 3210 aa12.49□□□□□ -0.41
KCNMA1-293ENST00000640969 EPG5Q9HCE0 2579 aa12.47□□□□□ -0.41
KCNMA1-293ENST00000640969 POLQO75417 2590 aa12.45□□□□□ -0.42
KCNMA1-293ENST00000640969 F8P00451 2351 aa12.44□□□□□ -0.42
KCNMA1-293ENST00000640969 LUZP6Q538Z0 58 aa12.43□□□□□ -0.42
KCNMA1-293ENST00000640969 IGLV7-46A0A075B6I9 117 aa12.4□□□□□ -0.42
KCNMA1-293ENST00000640969 HRES1P13985 223 aa12.38□□□□□ -0.43
KCNMA1-293ENST00000640969 KRTAP1-3Q8IUG1 177 aa12.38□□□□□ -0.43
KCNMA1-293ENST00000640969 Q6ZSA8 131 aa12.37□□□□□ -0.43
KCNMA1-293ENST00000640969 A0A1B0GU33 70 aa12.37□□□□□ -0.43
KCNMA1-293ENST00000640969 ACANP16112 2415 aa12.35□□□□□ -0.43
KCNMA1-293ENST00000640969 Q75L30 129 aa12.34□□□□□ -0.43
KCNMA1-293ENST00000640969 TNP2Q05952 138 aa12.34□□□□□ -0.43
KCNMA1-293ENST00000640969 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.33□□□□□ -0.44
KCNMA1-293ENST00000640969 KRTAP1-1Q07627 177 aa12.31□□□□□ -0.44
KCNMA1-293ENST00000640969 CAMK2N1Q7Z7J9 78 aa12.31□□□□□ -0.44
KCNMA1-293ENST00000640969 FLNBO75369 2602 aaKnown RBP12.28□□□□□ -0.44
KCNMA1-293ENST00000640969 FAM229BQ4G0N7 80 aa12.26□□□□□ -0.45
KCNMA1-293ENST00000640969 MMP24-AS1A0A0U1RRL7 71 aa12.25□□□□□ -0.45
KCNMA1-293ENST00000640969 LINC00483Q53H64 154 aa12.25□□□□□ -0.45
KCNMA1-293ENST00000640969 LINC01558Q9Y6Z2 57 aa12.23□□□□□ -0.45
KCNMA1-293ENST00000640969 WIPF1O43516 503 aa12.21□□□□□ -0.45
KCNMA1-293ENST00000640969 Q8N9P0 234 aaPredicted RBP12.21□□□□□ -0.45
KCNMA1-293ENST00000640969 CR1P17927 2039 aa12.2□□□□□ -0.46
KCNMA1-293ENST00000640969 ZCCHC13Q8WW36 166 aaKnown RBP12.2□□□□□ -0.46
KCNMA1-293ENST00000640969 Q5XG85 94 aa12.18□□□□□ -0.46
KCNMA1-293ENST00000640969 Q8NDZ9 215 aa12.15□□□□□ -0.46
KCNMA1-293ENST00000640969 S4R3F8 94 aa12.15□□□□□ -0.46
KCNMA1-293ENST00000640969 DMAC1Q96GE9 116 aa12.14□□□□□ -0.47
KCNMA1-293ENST00000640969 PRAC1Q96KF2 57 aa12.14□□□□□ -0.47
KCNMA1-293ENST00000640969 M0R2T5 61 aa12.13□□□□□ -0.47
KCNMA1-293ENST00000640969 PLAC8Q9NZF1 115 aa12.12□□□□□ -0.47
KCNMA1-293ENST00000640969 CYSTM1Q9H1C7 97 aa12.11□□□□□ -0.47
KCNMA1-293ENST00000640969 Q5W150 140 aa12.1□□□□□ -0.47
KCNMA1-293ENST00000640969 FP248Q71RG6 208 aaPredicted RBP12.1□□□□□ -0.47
KCNMA1-293ENST00000640969 SPRR1AP35321 89 aa12.09□□□□□ -0.47
KCNMA1-293ENST00000640969 CSAG1Q6PB30 78 aa12.09□□□□□ -0.47
KCNMA1-293ENST00000640969 Q5VV11 94 aa12.06□□□□□ -0.48
KCNMA1-293ENST00000640969 LINC00472Q9H8W2 130 aa12.03□□□□□ -0.48
KCNMA1-293ENST00000640969 SPINK7P58062 85 aa12.02□□□□□ -0.48
KCNMA1-293ENST00000640969 SPRR1BP22528 89 aa11.98□□□□□ -0.49
KCNMA1-293ENST00000640969 HECTD1Q9ULT8 2610 aa11.98□□□□□ -0.49
KCNMA1-293ENST00000640969 GOLGB1Q14789 3259 aaKnown RBP11.94□□□□□ -0.5
KCNMA1-293ENST00000640969 H3BS24 57 aa11.93□□□□□ -0.5
KCNMA1-293ENST00000640969 R4GN34 69 aa11.92□□□□□ -0.5
KCNMA1-293ENST00000640969 USP24Q9UPU5 2620 aa11.89□□□□□ -0.51
KCNMA1-293ENST00000640969 MGAM2Q2M2H8 2515 aa11.89□□□□□ -0.51
KCNMA1-293ENST00000640969 A0A0A0MQY5 61 aa11.88□□□□□ -0.51
KCNMA1-293ENST00000640969 KRTAP26-1Q6PEX3 210 aa11.87□□□□□ -0.51
KCNMA1-293ENST00000640969 PRRC2CQ9Y520 2896 aaKnown RBP11.87□□□□□ -0.51
KCNMA1-293ENST00000640969 KRTAP1-5Q9BYS1 174 aa11.82□□□□□ -0.52
KCNMA1-293ENST00000640969 ROMO1P60602 79 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms