RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 TTTY13Q9BZ97 58 aa5.21□□□□□ -1.58
SCARB2-220ENST00000640076 TOMM7Q9P0U1 55 aa5.21□□□□□ -1.58
SCARB2-220ENST00000640076 A0A087X002 238 aa5.2□□□□□ -1.58
SCARB2-220ENST00000640076 COX8AP10176 69 aa5.2□□□□□ -1.58
SCARB2-220ENST00000640076 Q8IZM0 81 aa5.2□□□□□ -1.58
SCARB2-220ENST00000640076 DNAH17Q9UFH2 4485 aa5.2□□□□□ -1.58
SCARB2-220ENST00000640076 KRTAP4-8A0A0G2JLE6 195 aa5.2□□□□□ -1.58
SCARB2-220ENST00000640076 TRACP01848 142 aa5.2□□□□□ -1.58
SCARB2-220ENST00000640076 SPAG11BQ08648 103 aa5.2□□□□□ -1.58
SCARB2-220ENST00000640076 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
SCARB2-220ENST00000640076 C1orf134Q5TEV5 83 aa5.2□□□□□ -1.58
SCARB2-220ENST00000640076 FRAS1Q86XX4 4008 aa5.19□□□□□ -1.58
SCARB2-220ENST00000640076 RYR2Q92736 4967 aa5.19□□□□□ -1.58
SCARB2-220ENST00000640076 GVQW2A0A096LPI5 108 aaPredicted RBP5.19□□□□□ -1.58
SCARB2-220ENST00000640076 TMEM256-PLSCR3K7ERE1 68 aa5.19□□□□□ -1.58
SCARB2-220ENST00000640076 LECT2O14960 151 aa5.19□□□□□ -1.58
SCARB2-220ENST00000640076 CHTF8P0CG12 524 aa5.19□□□□□ -1.58
SCARB2-220ENST00000640076 WFDC2Q14508 124 aa5.19□□□□□ -1.58
SCARB2-220ENST00000640076 HIGD2BQ4VC39 106 aa5.19□□□□□ -1.58
SCARB2-220ENST00000640076 NDUFA12Q9UI09 145 aa5.19□□□□□ -1.58
SCARB2-220ENST00000640076 MYMXA0A1B0GTQ4 84 aa5.18□□□□□ -1.58
SCARB2-220ENST00000640076 LRCOL1A6NCL2 159 aa5.18□□□□□ -1.58
SCARB2-220ENST00000640076 ZNF815PA8K554 130 aa5.18□□□□□ -1.58
SCARB2-220ENST00000640076 EPM2AB3EWF7 344 aa5.18□□□□□ -1.58
SCARB2-220ENST00000640076 NDUFC2-KCTD14E9PQ53 114 aa5.18□□□□□ -1.58
SCARB2-220ENST00000640076 NDUFA1O15239 70 aa5.18□□□□□ -1.58
SCARB2-220ENST00000640076 CRYGAP11844 174 aa5.18□□□□□ -1.58
SCARB2-220ENST00000640076 HINT1P49773 126 aaPredicted RBP5.18□□□□□ -1.58
SCARB2-220ENST00000640076 C2orf82Q6UX34 121 aa5.18□□□□□ -1.58
SCARB2-220ENST00000640076 ZNF625Q96I27 306 aaPredicted RBP5.18□□□□□ -1.58
SCARB2-220ENST00000640076 CXCL5P42830 114 aa5.18□□□□□ -1.58
SCARB2-220ENST00000640076 RAB37Q96AX2 223 aa5.18□□□□□ -1.58
SCARB2-220ENST00000640076 SFTA2Q6UW10 78 aa5.17□□□□□ -1.58
SCARB2-220ENST00000640076 TEN1Q86WV5 123 aa5.17□□□□□ -1.58
SCARB2-220ENST00000640076 IGLV8-61A0A075B6I0 122 aa5.16□□□□□ -1.58
SCARB2-220ENST00000640076 F8W1H4 67 aa5.16□□□□□ -1.58
SCARB2-220ENST00000640076 CXCL6P80162 114 aa5.16□□□□□ -1.58
SCARB2-220ENST00000640076 UNQ6190/PRO20217Q6UXQ8 127 aa5.16□□□□□ -1.58
SCARB2-220ENST00000640076 KRTAP9-9Q9BYP9 154 aa5.16□□□□□ -1.58
SCARB2-220ENST00000640076 KRTAP9-4Q9BYQ2 154 aa5.16□□□□□ -1.58
SCARB2-220ENST00000640076 A0A0J9YXY3 114 aa5.16□□□□□ -1.58
SCARB2-220ENST00000640076 H3BT86 120 aa5.16□□□□□ -1.58
SCARB2-220ENST00000640076 RTL8CO15255 209 aa5.16□□□□□ -1.58
SCARB2-220ENST00000640076 C14orf177Q52M58 125 aa5.16□□□□□ -1.58
SCARB2-220ENST00000640076 COPS9Q8WXC6 57 aa5.16□□□□□ -1.58
SCARB2-220ENST00000640076 CAMK2N2Q96S95 79 aa5.16□□□□□ -1.58
SCARB2-220ENST00000640076 FAT2Q9NYQ8 4349 aa5.16□□□□□ -1.58
SCARB2-220ENST00000640076 A0A087WTM6 91 aa5.15□□□□□ -1.58
SCARB2-220ENST00000640076 K7ERJ3 54 aa5.15□□□□□ -1.58
SCARB2-220ENST00000640076 SNCGO76070 127 aa5.15□□□□□ -1.58
SCARB2-220ENST00000640076 SLPIP03973 132 aa5.15□□□□□ -1.58
SCARB2-220ENST00000640076 C2orf91Q6ZV80 131 aa5.15□□□□□ -1.58
SCARB2-220ENST00000640076 SYCNQ0VAF6 134 aa5.15□□□□□ -1.59
SCARB2-220ENST00000640076 KRTAP4-16G5E9R7 235 aaPredicted RBP5.14□□□□□ -1.59
SCARB2-220ENST00000640076 Q8N814 137 aa5.14□□□□□ -1.59
SCARB2-220ENST00000640076 C6orf48Q9UBA6 75 aa5.14□□□□□ -1.59
SCARB2-220ENST00000640076 SERP1Q9Y6X1 66 aa5.14□□□□□ -1.59
SCARB2-220ENST00000640076 TRBV30A0A0K0K1B3 111 aa5.13□□□□□ -1.59
SCARB2-220ENST00000640076 CNBPP62633 177 aaKnown RBP5.13□□□□□ -1.59
SCARB2-220ENST00000640076 C9orf116Q5BN46 136 aaPredicted RBP5.13□□□□□ -1.59
SCARB2-220ENST00000640076 PHF5AQ7RTV0 110 aaKnown RBP5.13□□□□□ -1.59
SCARB2-220ENST00000640076 LITAFQ99732 161 aa5.13□□□□□ -1.59
SCARB2-220ENST00000640076 HIGD1BQ9P298 99 aa5.13□□□□□ -1.59
SCARB2-220ENST00000640076 HECTD4Q9Y4D8 3996 aa5.13□□□□□ -1.59
SCARB2-220ENST00000640076 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.13□□□□□ -1.59
SCARB2-220ENST00000640076 TIMM17BO60830 172 aa5.13□□□□□ -1.59
SCARB2-220ENST00000640076 SMIM13P0DJ93 91 aa5.13□□□□□ -1.59
SCARB2-220ENST00000640076 DNAH11Q96DT5 4516 aa5.12□□□□□ -1.59
SCARB2-220ENST00000640076 IGLV7-46A0A075B6I9 117 aa5.12□□□□□ -1.59
SCARB2-220ENST00000640076 UBE2BP63146 152 aa5.12□□□□□ -1.59
SCARB2-220ENST00000640076 CIRBPQ14011 172 aaKnown RBP5.12□□□□□ -1.59
SCARB2-220ENST00000640076 LINC00158P58513 81 aa5.11□□□□□ -1.59
SCARB2-220ENST00000640076 COX17Q14061 63 aa5.11□□□□□ -1.59
SCARB2-220ENST00000640076 RYR3Q15413 4870 aa5.11□□□□□ -1.59
SCARB2-220ENST00000640076 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.11□□□□□ -1.59
SCARB2-220ENST00000640076 MIR7-3HGQ8N6C7 128 aa5.11□□□□□ -1.59
SCARB2-220ENST00000640076 DAND5Q8N907 189 aa5.11□□□□□ -1.59
SCARB2-220ENST00000640076 SCXQ7RTU7 201 aa5.1□□□□□ -1.59
SCARB2-220ENST00000640076 C7orf33Q8WU49 177 aa5.1□□□□□ -1.59
SCARB2-220ENST00000640076 DSCR8Q96T75 97 aa5.1□□□□□ -1.59
SCARB2-220ENST00000640076 SND1-IT1Q9HBX3 110 aa5.1□□□□□ -1.59
SCARB2-220ENST00000640076 C9orf163Q8N9P6 203 aa5.09□□□□□ -1.59
SCARB2-220ENST00000640076 KRTAP4-12Q9BQ66 201 aa5.09□□□□□ -1.59
SCARB2-220ENST00000640076 PKD1P98161 4303 aa5.09□□□□□ -1.59
SCARB2-220ENST00000640076 TLX1NBP0CAT3 122 aa5.09□□□□□ -1.6
SCARB2-220ENST00000640076 LINC01554Q52M75 96 aa5.09□□□□□ -1.6
SCARB2-220ENST00000640076 SPCS1Q9Y6A9 102 aa5.09□□□□□ -1.6
SCARB2-220ENST00000640076 COX7CP15954 63 aa5.08□□□□□ -1.6
SCARB2-220ENST00000640076 FUSP35637 526 aaKnown RBP eCLIP5.08□□□□□ -1.6
SCARB2-220ENST00000640076 NPC2P61916 151 aa5.08□□□□□ -1.6
SCARB2-220ENST00000640076 SOSTDC1Q6X4U4 206 aa5.08□□□□□ -1.6
SCARB2-220ENST00000640076 LINC00308Q8TCZ7 52 aa5.08□□□□□ -1.6
SCARB2-220ENST00000640076 PKHD1P08F94 4074 aa5.08□□□□□ -1.6
SCARB2-220ENST00000640076 MUSTN1Q8IVN3 82 aa5.07□□□□□ -1.6
SCARB2-220ENST00000640076 DNAH5Q8TE73 4624 aa5.07□□□□□ -1.6
SCARB2-220ENST00000640076 KRTAP10-2P60368 255 aa5.07□□□□□ -1.6
SCARB2-220ENST00000640076 CEND1Q8N111 149 aa5.07□□□□□ -1.6
SCARB2-220ENST00000640076 XAGE1AQ9HD64 81 aa5.07□□□□□ -1.6
SCARB2-220ENST00000640076 LOC107984156A0A0G2JMH3 177 aa5.06□□□□□ -1.6
SCARB2-220ENST00000640076 SDIM1Q6ZPB5 146 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms