RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 Q6ZRP5 223 aa4.64□□□□□ -1.67
CIITA-214ENST00000636238 LOC107984156A0A0G2JMH3 177 aa4.63□□□□□ -1.67
CIITA-214ENST00000636238 GAGE2BQ13066 116 aa4.63□□□□□ -1.67
CIITA-214ENST00000636238 Q1RN00 199 aa4.63□□□□□ -1.67
CIITA-214ENST00000636238 SPINK6Q6UWN8 80 aa4.63□□□□□ -1.67
CIITA-214ENST00000636238 ARL17AQ8IVW1 177 aa4.63□□□□□ -1.67
CIITA-214ENST00000636238 LINC00337Q8N6G1 96 aa4.63□□□□□ -1.67
CIITA-214ENST00000636238 OR13C6PQ8NH95 151 aa4.63□□□□□ -1.67
CIITA-214ENST00000636238 SPACA4Q8TDM5 124 aa4.63□□□□□ -1.67
CIITA-214ENST00000636238 PPDPFQ9H3Y8 114 aa4.63□□□□□ -1.67
CIITA-214ENST00000636238 PKIGQ9Y2B9 76 aa4.63□□□□□ -1.67
CIITA-214ENST00000636238 A0A087WYN8 130 aa4.62□□□□□ -1.67
CIITA-214ENST00000636238 LOC107984640A0A0U1RRK4 108 aa4.62□□□□□ -1.67
CIITA-214ENST00000636238 PANO1I0J062 215 aa4.62□□□□□ -1.67
CIITA-214ENST00000636238 TLX1NBP0CAT3 122 aa4.62□□□□□ -1.67
CIITA-214ENST00000636238 C9orf129Q5T035 196 aaKnown RBP4.62□□□□□ -1.67
CIITA-214ENST00000636238 A0A1W2PPM0 123 aa4.61□□□□□ -1.67
CIITA-214ENST00000636238 FAM168BA1KXE4 195 aa4.61□□□□□ -1.67
CIITA-214ENST00000636238 NDUFC2O95298 119 aa4.61□□□□□ -1.67
CIITA-214ENST00000636238 PSMB2P49721 201 aa4.61□□□□□ -1.67
CIITA-214ENST00000636238 VAMP3Q15836 100 aa4.61□□□□□ -1.67
CIITA-214ENST00000636238 DPH3Q96FX2 82 aa4.61□□□□□ -1.67
CIITA-214ENST00000636238 A0A096LNI7 61 aa4.6□□□□□ -1.67
CIITA-214ENST00000636238 TRAV13-2A0A0B4J235 113 aa4.6□□□□□ -1.67
CIITA-214ENST00000636238 IGKV2-24A0A0C4DH68 120 aa4.6□□□□□ -1.67
CIITA-214ENST00000636238 VPREB1P12018 145 aa4.6□□□□□ -1.67
CIITA-214ENST00000636238 KRTAP9-2Q9BYQ4 174 aa4.6□□□□□ -1.67
CIITA-214ENST00000636238 LINC00474Q9P2X8 69 aa4.6□□□□□ -1.67
CIITA-214ENST00000636238 TRIAP1O43715 76 aa4.59□□□□□ -1.67
CIITA-214ENST00000636238 CHTF8P0CG12 524 aa4.59□□□□□ -1.67
CIITA-214ENST00000636238 SCGB1C2P0DMR2 95 aa4.59□□□□□ -1.67
CIITA-214ENST00000636238 FABP2P12104 132 aa4.59□□□□□ -1.67
CIITA-214ENST00000636238 SMIM11BQ8TCY0 68 aa4.59□□□□□ -1.67
CIITA-214ENST00000636238 MUC2Q02817 5179 aa4.59□□□□□ -1.68
CIITA-214ENST00000636238 GAGE10A6NGK3 116 aa4.58□□□□□ -1.68
CIITA-214ENST00000636238 S100A7L2Q5SY68 101 aa4.58□□□□□ -1.68
CIITA-214ENST00000636238 FAM19A5Q7Z5A7 132 aaPredicted RBP4.58□□□□□ -1.68
CIITA-214ENST00000636238 KRTAP7-1Q8IUC3 87 aa4.58□□□□□ -1.68
CIITA-214ENST00000636238 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
CIITA-214ENST00000636238 SPCS1Q9Y6A9 102 aa4.58□□□□□ -1.68
CIITA-214ENST00000636238 TRBV10-3A0A0K0K1G6 114 aa4.57□□□□□ -1.68
CIITA-214ENST00000636238 TRBV10-2A0A0K0K1G8 114 aa4.57□□□□□ -1.68
CIITA-214ENST00000636238 A0A1W2PNN7 141 aa4.57□□□□□ -1.68
CIITA-214ENST00000636238 K7EP34 96 aa4.57□□□□□ -1.68
CIITA-214ENST00000636238 M0R378 163 aa4.57□□□□□ -1.68
CIITA-214ENST00000636238 TCL1BO95988 128 aa4.57□□□□□ -1.68
CIITA-214ENST00000636238 NKAPP1Q8N9T2 125 aa4.57□□□□□ -1.68
CIITA-214ENST00000636238 CLEC2BQ92478 149 aa4.57□□□□□ -1.68
CIITA-214ENST00000636238 RPL37AP8A6NKH3 93 aa4.56□□□□□ -1.68
CIITA-214ENST00000636238 IGLV6-57P01721 117 aa4.56□□□□□ -1.68
CIITA-214ENST00000636238 RPL28P46779 137 aaKnown RBP4.56□□□□□ -1.68
CIITA-214ENST00000636238 TMEM126AQ9H061 195 aa4.56□□□□□ -1.68
CIITA-214ENST00000636238 PSORS1C2Q9UIG4 136 aa4.56□□□□□ -1.68
CIITA-214ENST00000636238 C22orf24Q9Y442 160 aa4.56□□□□□ -1.68
CIITA-214ENST00000636238 IGLV5-37A0A075B6J1 123 aa4.55□□□□□ -1.68
CIITA-214ENST00000636238 KRTAP9-6A0A140TA67 174 aa4.55□□□□□ -1.68
CIITA-214ENST00000636238 GHRHP01286 108 aa4.55□□□□□ -1.68
CIITA-214ENST00000636238 UBE2V1Q13404 147 aa4.55□□□□□ -1.68
CIITA-214ENST00000636238 LINC00167Q96N53 147 aa4.55□□□□□ -1.68
CIITA-214ENST00000636238 LPAP08519 4548 aa4.55□□□□□ -1.68
CIITA-214ENST00000636238 H3BMG7 143 aa4.54□□□□□ -1.68
CIITA-214ENST00000636238 COX6CP09669 75 aa4.54□□□□□ -1.68
CIITA-214ENST00000636238 C6orf99Q4VX62 202 aa4.54□□□□□ -1.68
CIITA-214ENST00000636238 LYRM7Q5U5X0 104 aa4.54□□□□□ -1.68
CIITA-214ENST00000636238 GTF2H5Q6ZYL4 71 aa4.54□□□□□ -1.68
CIITA-214ENST00000636238 PHF5AQ7RTV0 110 aaKnown RBP4.54□□□□□ -1.68
CIITA-214ENST00000636238 MTURNQ8N3F0 131 aa4.54□□□□□ -1.68
CIITA-214ENST00000636238 FAM218AQ96MZ4 157 aa4.54□□□□□ -1.68
CIITA-214ENST00000636238 TRAV23DV6A0A075B6W5 121 aa4.53□□□□□ -1.68
CIITA-214ENST00000636238 M0QXV9 152 aa4.53□□□□□ -1.68
CIITA-214ENST00000636238 MRPL55Q7Z7F7 128 aaKnown RBP4.53□□□□□ -1.68
CIITA-214ENST00000636238 IGLV1-50A0A075B6I6 118 aa4.52□□□□□ -1.69
CIITA-214ENST00000636238 TRBV20-1A0A075B6N2 111 aa4.52□□□□□ -1.69
CIITA-214ENST00000636238 ATXN8Q156A1 80 aa4.52□□□□□ -1.69
CIITA-214ENST00000636238 H0YGX0 51 aa4.51□□□□□ -1.69
CIITA-214ENST00000636238 LST1O00453 97 aa4.51□□□□□ -1.69
CIITA-214ENST00000636238 ZNF73O43830 326 aaPredicted RBP4.51□□□□□ -1.69
CIITA-214ENST00000636238 KRTAP11-1Q8IUC1 163 aa4.51□□□□□ -1.69
CIITA-214ENST00000636238 DIRC1Q969H9 104 aa4.51□□□□□ -1.69
CIITA-214ENST00000636238 C9JAW5 83 aa4.5□□□□□ -1.69
CIITA-214ENST00000636238 PRYO14603 147 aa4.5□□□□□ -1.69
CIITA-214ENST00000636238 COX7BP24311 80 aa4.5□□□□□ -1.69
CIITA-214ENST00000636238 UBE2BP63146 152 aa4.5□□□□□ -1.69
CIITA-214ENST00000636238 KCNQ1DNQ9H478 68 aa4.5□□□□□ -1.69
CIITA-214ENST00000636238 SMCPP49901 116 aaPredicted RBP4.49□□□□□ -1.69
CIITA-214ENST00000636238 LCE2AQ5TA79 106 aaPredicted RBP4.49□□□□□ -1.69
CIITA-214ENST00000636238 LINC00575Q6W349 94 aa4.49□□□□□ -1.69
CIITA-214ENST00000636238 PRO0461Q9UI25 63 aa4.49□□□□□ -1.69
CIITA-214ENST00000636238 ETDCA0A1B0GVM5 59 aa4.48□□□□□ -1.69
CIITA-214ENST00000636238 TRACP01848 142 aa4.48□□□□□ -1.69
CIITA-214ENST00000636238 CBY1Q9Y3M2 126 aa4.48□□□□□ -1.69
CIITA-214ENST00000636238 TRBV7-6A0A0J9YX20 115 aa4.47□□□□□ -1.69
CIITA-214ENST00000636238 B5MCH6 92 aa4.47□□□□□ -1.69
CIITA-214ENST00000636238 KRTAP4-16G5E9R7 235 aaPredicted RBP4.47□□□□□ -1.69
CIITA-214ENST00000636238 SLC25A20O43772 301 aa4.47□□□□□ -1.69
CIITA-214ENST00000636238 SPRR1AP35321 89 aa4.47□□□□□ -1.69
CIITA-214ENST00000636238 ELOF1P60002 83 aaKnown RBP4.47□□□□□ -1.69
CIITA-214ENST00000636238 hADV29S1A0JD25 119 aa4.46□□□□□ -1.7
CIITA-214ENST00000636238 F8W1H4 67 aa4.46□□□□□ -1.7
CIITA-214ENST00000636238 DNAL4O96015 105 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms