RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 REG3GQ6UW15 175 aa9.13□□□□□ -0.95
LIMS4-203ENST00000632758 PRYO14603 147 aa9.12□□□□□ -0.95
LIMS4-203ENST00000632758 ZNF73O43830 326 aaPredicted RBP9.12□□□□□ -0.95
LIMS4-203ENST00000632758 TSPAN13O95857 204 aa9.12□□□□□ -0.95
LIMS4-203ENST00000632758 Q1RN00 199 aa9.12□□□□□ -0.95
LIMS4-203ENST00000632758 C6orf99Q4VX62 202 aa9.12□□□□□ -0.95
LIMS4-203ENST00000632758 SPRR1AP35321 89 aa9.11□□□□□ -0.95
LIMS4-203ENST00000632758 LINC00528Q8N1L1 170 aa9.11□□□□□ -0.95
LIMS4-203ENST00000632758 KRTAP4-16G5E9R7 235 aaPredicted RBP9.1□□□□□ -0.95
LIMS4-203ENST00000632758 RPL28P46779 137 aaKnown RBP9.1□□□□□ -0.95
LIMS4-203ENST00000632758 C1orf137Q5JT78 98 aa9.1□□□□□ -0.95
LIMS4-203ENST00000632758 NAA38Q9BRA0 125 aaKnown RBP9.1□□□□□ -0.95
LIMS4-203ENST00000632758 KRTAP17-1Q9BYP8 105 aa9.1□□□□□ -0.95
LIMS4-203ENST00000632758 VPS13BQ7Z7G8 4022 aa9.09□□□□□ -0.95
LIMS4-203ENST00000632758 TAX1BP3O14907 124 aa9.08□□□□□ -0.96
LIMS4-203ENST00000632758 DIRC1Q969H9 104 aa9.08□□□□□ -0.96
LIMS4-203ENST00000632758 CBY1Q9Y3M2 126 aa9.08□□□□□ -0.96
LIMS4-203ENST00000632758 BCE1O60756 84 aa9.07□□□□□ -0.96
LIMS4-203ENST00000632758 FAM19A1Q7Z5A9 133 aa9.07□□□□□ -0.96
LIMS4-203ENST00000632758 ETDCA0A1B0GVM5 59 aa9.07□□□□□ -0.96
LIMS4-203ENST00000632758 B5MCH6 92 aa9.07□□□□□ -0.96
LIMS4-203ENST00000632758 TRIAP1O43715 76 aa9.07□□□□□ -0.96
LIMS4-203ENST00000632758 RPL37AP61513 92 aaKnown RBP9.07□□□□□ -0.96
LIMS4-203ENST00000632758 COL5A1-AS1Q5SY13 56 aa9.07□□□□□ -0.96
LIMS4-203ENST00000632758 PSMB2P49721 201 aa9.06□□□□□ -0.96
LIMS4-203ENST00000632758 PRLHP81277 87 aa9.06□□□□□ -0.96
LIMS4-203ENST00000632758 COX7BP24311 80 aa9.04□□□□□ -0.96
LIMS4-203ENST00000632758 H3BUT2 72 aa9.03□□□□□ -0.96
LIMS4-203ENST00000632758 IGLV7-43P04211 117 aa9.03□□□□□ -0.96
LIMS4-203ENST00000632758 UBE2AP49459 152 aa9.03□□□□□ -0.96
LIMS4-203ENST00000632758 ELOF1P60002 83 aaKnown RBP9.03□□□□□ -0.96
LIMS4-203ENST00000632758 KRTAP10-4P60372 401 aaPredicted RBP9.03□□□□□ -0.96
LIMS4-203ENST00000632758 KRTAP13-1Q8IUC0 172 aa9.03□□□□□ -0.96
LIMS4-203ENST00000632758 TRBV7-6A0A0J9YX20 115 aa9.03□□□□□ -0.96
LIMS4-203ENST00000632758 C9orf118A6NHY6 69 aa9.03□□□□□ -0.96
LIMS4-203ENST00000632758 VAMP3Q15836 100 aa9.03□□□□□ -0.96
LIMS4-203ENST00000632758 Q6ZRX8 168 aa9.03□□□□□ -0.96
LIMS4-203ENST00000632758 Q9BRP9 147 aa9.02□□□□□ -0.97
LIMS4-203ENST00000632758 FAM229AH3BQW9 127 aa9.01□□□□□ -0.97
LIMS4-203ENST00000632758 ZNF861PO60384 105 aa9□□□□□ -0.97
LIMS4-203ENST00000632758 SCGB1C2P0DMR2 95 aa9□□□□□ -0.97
LIMS4-203ENST00000632758 Q5VSD8 79 aa9□□□□□ -0.97
LIMS4-203ENST00000632758 SMCR5Q8TEV8 140 aa9□□□□□ -0.97
LIMS4-203ENST00000632758 FAM218AQ96MZ4 157 aa9□□□□□ -0.97
LIMS4-203ENST00000632758 H0Y9J4 135 aa8.99□□□□□ -0.97
LIMS4-203ENST00000632758 CLEC2BQ92478 149 aa8.99□□□□□ -0.97
LIMS4-203ENST00000632758 HIGD2AQ9BW72 106 aa8.99□□□□□ -0.97
LIMS4-203ENST00000632758 H0YGX0 51 aa8.99□□□□□ -0.97
LIMS4-203ENST00000632758 ERC2-IT1O76042 136 aa8.99□□□□□ -0.97
LIMS4-203ENST00000632758 COX6CP09669 75 aa8.99□□□□□ -0.97
LIMS4-203ENST00000632758 LINC00575Q6W349 94 aa8.99□□□□□ -0.97
LIMS4-203ENST00000632758 Q8N1X5 172 aa8.99□□□□□ -0.97
LIMS4-203ENST00000632758 PLA2G1BP04054 148 aaKnown RBP8.97□□□□□ -0.97
LIMS4-203ENST00000632758 HERC2O95714 4834 aa8.97□□□□□ -0.97
LIMS4-203ENST00000632758 A0A1W2PPM0 123 aa8.96□□□□□ -0.97
LIMS4-203ENST00000632758 INAFM2P0DMQ5 153 aa8.96□□□□□ -0.97
LIMS4-203ENST00000632758 DHRS4-AS1Q9P1J3 65 aa8.95□□□□□ -0.98
LIMS4-203ENST00000632758 hADV29S1A0JD25 119 aa8.95□□□□□ -0.98
LIMS4-203ENST00000632758 TCL1BO95988 128 aa8.95□□□□□ -0.98
LIMS4-203ENST00000632758 SRRM2Q9UQ35 2752 aaKnown RBP8.94□□□□□ -0.98
LIMS4-203ENST00000632758 ST20-AS1Q8NBB2 130 aa8.94□□□□□ -0.98
LIMS4-203ENST00000632758 SLC25A20O43772 301 aa8.93□□□□□ -0.98
LIMS4-203ENST00000632758 FABP2P12104 132 aa8.92□□□□□ -0.98
LIMS4-203ENST00000632758 LST1O00453 97 aa8.91□□□□□ -0.98
LIMS4-203ENST00000632758 KRTAP4-5Q9BYR2 181 aa8.91□□□□□ -0.98
LIMS4-203ENST00000632758 SPINK6Q6UWN8 80 aa8.9□□□□□ -0.98
LIMS4-203ENST00000632758 LYRM7Q5U5X0 104 aa8.9□□□□□ -0.99
LIMS4-203ENST00000632758 Q6ZQY7 126 aa8.9□□□□□ -0.99
LIMS4-203ENST00000632758 PKHD1L1Q86WI1 4243 aa8.89□□□□□ -0.99
LIMS4-203ENST00000632758 A0A1B0GX51 115 aa8.89□□□□□ -0.99
LIMS4-203ENST00000632758 ATXN8Q156A1 80 aa8.88□□□□□ -0.99
LIMS4-203ENST00000632758 DEFB105AQ8NG35 78 aa8.88□□□□□ -0.99
LIMS4-203ENST00000632758 SPCS1Q9Y6A9 102 aa8.88□□□□□ -0.99
LIMS4-203ENST00000632758 TRBV20-1A0A075B6N2 111 aa8.87□□□□□ -0.99
LIMS4-203ENST00000632758 TRACP01848 142 aa8.87□□□□□ -0.99
LIMS4-203ENST00000632758 LINC01547P58512 204 aaPredicted RBP8.87□□□□□ -0.99
LIMS4-203ENST00000632758 SPRR4Q96PI1 79 aa8.87□□□□□ -0.99
LIMS4-203ENST00000632758 ANAPC11Q9NYG5 84 aa8.87□□□□□ -0.99
LIMS4-203ENST00000632758 SNCGO76070 127 aa8.86□□□□□ -0.99
LIMS4-203ENST00000632758 GAGE2AQ6NT46 116 aa8.86□□□□□ -0.99
LIMS4-203ENST00000632758 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.86□□□□□ -0.99
LIMS4-203ENST00000632758 H3BMG7 143 aa8.85□□□□□ -0.99
LIMS4-203ENST00000632758 DNAL4O96015 105 aa8.85□□□□□ -0.99
LIMS4-203ENST00000632758 KRTAP1-4P0C5Y4 121 aa8.84□□□□□ -0.99
LIMS4-203ENST00000632758 Q8N377 158 aa8.84□□□□□ -0.99
LIMS4-203ENST00000632758 IGLV5-48A0A075B6I7 105 aa8.83□□□□□ -1
LIMS4-203ENST00000632758 A0A1B0GV90 55 aa8.83□□□□□ -1
LIMS4-203ENST00000632758 K7EP34 96 aa8.83□□□□□ -1
LIMS4-203ENST00000632758 ZNF706Q9Y5V0 76 aaPredicted RBP8.82□□□□□ -1
LIMS4-203ENST00000632758 TEX49A0A1B0GTD5 131 aa8.82□□□□□ -1
LIMS4-203ENST00000632758 ABCA13Q86UQ4 5058 aa8.81□□□□□ -1
LIMS4-203ENST00000632758 C9JAW5 83 aa8.81□□□□□ -1
LIMS4-203ENST00000632758 LINC00483Q53H64 154 aa8.81□□□□□ -1
LIMS4-203ENST00000632758 MTURNQ8N3F0 131 aa8.81□□□□□ -1
LIMS4-203ENST00000632758 ORMDL1Q9P0S3 153 aa8.81□□□□□ -1
LIMS4-203ENST00000632758 SPRR1BP22528 89 aa8.8□□□□□ -1
LIMS4-203ENST00000632758 C3orf22Q8N5N4 141 aa8.8□□□□□ -1
LIMS4-203ENST00000632758 BAALC-AS2P0C853 105 aa8.79□□□□□ -1
LIMS4-203ENST00000632758 OCIAD2Q56VL3 154 aa8.79□□□□□ -1
LIMS4-203ENST00000632758 SMIM29Q86T20 159 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms