RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 PREX1Q8TCU6 1659 aa-1.47□□□□□ -2.64
SRP54-214ENST00000630962 TRBV25-1A0A075B6N4 114 aa-1.47□□□□□ -2.64
SRP54-214ENST00000630962 DEFB110Q30KQ9 67 aa-1.47□□□□□ -2.64
SRP54-214ENST00000630962 ACACBO00763 2458 aa-1.47□□□□□ -2.65
SRP54-214ENST00000630962 CHD1O14646 1710 aa-1.48□□□□□ -2.65
SRP54-214ENST00000630962 CEP290O15078 2479 aa-1.48□□□□□ -2.65
SRP54-214ENST00000630962 H7BZZ5 65 aa-1.48□□□□□ -2.65
SRP54-214ENST00000630962 K7EP34 96 aa-1.48□□□□□ -2.65
SRP54-214ENST00000630962 IGLC2P0DOY2 106 aa-1.48□□□□□ -2.65
SRP54-214ENST00000630962 IGLC3P0DOY3 106 aa-1.48□□□□□ -2.65
SRP54-214ENST00000630962 TOPAZ1Q8N9V7 1692 aa-1.48□□□□□ -2.65
SRP54-214ENST00000630962 MAP3K1Q13233 1512 aa-1.49□□□□□ -2.65
SRP54-214ENST00000630962 UBR3Q6ZT12 1888 aa-1.49□□□□□ -2.65
SRP54-214ENST00000630962 NRKQ7Z2Y5 1582 aa-1.49□□□□□ -2.65
SRP54-214ENST00000630962 C5orf42Q9H799 3197 aa-1.49□□□□□ -2.65
SRP54-214ENST00000630962 H3BQ15 152 aa-1.49□□□□□ -2.65
SRP54-214ENST00000630962 UQCRHP07919 91 aa-1.49□□□□□ -2.65
SRP54-214ENST00000630962 PPP3R1P63098 170 aa-1.49□□□□□ -2.65
SRP54-214ENST00000630962 COX6B2Q6YFQ2 88 aa-1.49□□□□□ -2.65
SRP54-214ENST00000630962 IER3IP1Q9Y5U9 82 aa-1.49□□□□□ -2.65
SRP54-214ENST00000630962 FAM135AQ9P2D6 1515 aa-1.5□□□□□ -2.65
SRP54-214ENST00000630962 H0YAA0 97 aa-1.5□□□□□ -2.65
SRP54-214ENST00000630962 GNG4P50150 75 aa-1.5□□□□□ -2.65
SRP54-214ENST00000630962 DEFB1P60022 68 aa-1.5□□□□□ -2.65
SRP54-214ENST00000630962 SPHKAPQ2M3C7 1700 aa-1.51□□□□□ -2.65
SRP54-214ENST00000630962 COX7BP24311 80 aa-1.51□□□□□ -2.65
SRP54-214ENST00000630962 RPL38P63173 70 aaKnown RBP-1.51□□□□□ -2.65
SRP54-214ENST00000630962 MAGI2Q86UL8 1455 aa-1.51□□□□□ -2.65
SRP54-214ENST00000630962 MLH3Q9UHC1 1453 aa-1.51□□□□□ -2.65
SRP54-214ENST00000630962 DNAH7Q8WXX0 4024 aa-1.51□□□□□ -2.65
SRP54-214ENST00000630962 QSER1Q2KHR3 1735 aa-1.52□□□□□ -2.65
SRP54-214ENST00000630962 DNAH8Q96JB1 4490 aa-1.52□□□□□ -2.65
SRP54-214ENST00000630962 D6R8Y8 96 aa-1.52□□□□□ -2.65
SRP54-214ENST00000630962 NDUFC1O43677 76 aa-1.52□□□□□ -2.65
SRP54-214ENST00000630962 S100A1P23297 94 aa-1.52□□□□□ -2.65
SRP54-214ENST00000630962 MUSTN1Q8IVN3 82 aa-1.52□□□□□ -2.65
SRP54-214ENST00000630962 NALCNQ8IZF0 1738 aa-1.52□□□□□ -2.65
SRP54-214ENST00000630962 GNGT2O14610 69 aa-1.53□□□□□ -2.65
SRP54-214ENST00000630962 LEPROTL1O95214 131 aa-1.53□□□□□ -2.65
SRP54-214ENST00000630962 TRGV9Q99603 122 aa-1.53□□□□□ -2.65
SRP54-214ENST00000630962 SCN11AQ9UI33 1791 aa-1.53□□□□□ -2.65
SRP54-214ENST00000630962 RGPD8O14715 1765 aaPredicted RBP-1.54□□□□□ -2.66
SRP54-214ENST00000630962 RGPD5Q99666 1765 aa-1.54□□□□□ -2.66
SRP54-214ENST00000630962 PKD1L3Q7Z443 1732 aa-1.54□□□□□ -2.66
SRP54-214ENST00000630962 ABCA3Q99758 1704 aa-1.54□□□□□ -2.66
SRP54-214ENST00000630962 ABCC2Q92887 1545 aa-1.54□□□□□ -2.66
SRP54-214ENST00000630962 LRRC9Q6ZRR7 1453 aa-1.54□□□□□ -2.66
SRP54-214ENST00000630962 PRLHP81277 87 aa-1.54□□□□□ -2.66
SRP54-214ENST00000630962 UBE2D4Q9Y2X8 147 aa-1.54□□□□□ -2.66
SRP54-214ENST00000630962 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.55□□□□□ -2.66
SRP54-214ENST00000630962 SRCAPQ6ZRS2 3230 aa-1.55□□□□□ -2.66
SRP54-214ENST00000630962 DYNC1H1Q14204 4646 aaKnown RBP-1.55□□□□□ -2.66
SRP54-214ENST00000630962 COL12A1Q99715 3063 aa-1.55□□□□□ -2.66
SRP54-214ENST00000630962 BPTFQ12830 3046 aa-1.55□□□□□ -2.66
SRP54-214ENST00000630962 PZPP20742 1482 aa-1.55□□□□□ -2.66
SRP54-214ENST00000630962 RAPGEF2Q9Y4G8 1499 aa-1.55□□□□□ -2.66
SRP54-214ENST00000630962 MPC2O95563 127 aa-1.55□□□□□ -2.66
SRP54-214ENST00000630962 ETDBQ3ZM63 59 aa-1.55□□□□□ -2.66
SRP54-214ENST00000630962 CRYBG1Q9Y4K1 1723 aa-1.55□□□□□ -2.66
SRP54-214ENST00000630962 CORTO00230 105 aa-1.56□□□□□ -2.66
SRP54-214ENST00000630962 LINC00158P58513 81 aa-1.56□□□□□ -2.66
SRP54-214ENST00000630962 GTF2H5Q6ZYL4 71 aa-1.56□□□□□ -2.66
SRP54-214ENST00000630962 PRO3102Q9H379 93 aa-1.56□□□□□ -2.66
SRP54-214ENST00000630962 CHD7Q9P2D1 2997 aa-1.56□□□□□ -2.66
SRP54-214ENST00000630962 RPL13AP3Q6NVV1 102 aa-1.57□□□□□ -2.66
SRP54-214ENST00000630962 ALKAL2Q6UX46 152 aa-1.57□□□□□ -2.66
SRP54-214ENST00000630962 ZNF720Q7Z2F6 126 aa-1.57□□□□□ -2.66
SRP54-214ENST00000630962 PMCHL2Q9BQD1 86 aa-1.57□□□□□ -2.66
SRP54-214ENST00000630962 LRRC7Q96NW7 1537 aa-1.57□□□□□ -2.66
SRP54-214ENST00000630962 NRXN1Q9ULB1 1477 aa-1.57□□□□□ -2.66
SRP54-214ENST00000630962 UNC13AQ9UPW8 1703 aa-1.57□□□□□ -2.66
SRP54-214ENST00000630962 F8WEM9 126 aa-1.58□□□□□ -2.66
SRP54-214ENST00000630962 C3orf79P0CE67 100 aa-1.58□□□□□ -2.66
SRP54-214ENST00000630962 S100A12P80511 92 aa-1.58□□□□□ -2.66
SRP54-214ENST00000630962 HMGN3Q15651 99 aa-1.58□□□□□ -2.66
SRP54-214ENST00000630962 KRTAP19-5Q3LI72 72 aa-1.58□□□□□ -2.66
SRP54-214ENST00000630962 TMEM203Q969S6 136 aa-1.58□□□□□ -2.66
SRP54-214ENST00000630962 GAFA1Q96PS6 74 aa-1.58□□□□□ -2.66
SRP54-214ENST00000630962 A0A1B0GV90 55 aa-1.59□□□□□ -2.66
SRP54-214ENST00000630962 DLEU1O43261 78 aa-1.59□□□□□ -2.66
SRP54-214ENST00000630962 USP32Q8NFA0 1604 aa-1.59□□□□□ -2.66
SRP54-214ENST00000630962 PLXNC1O60486 1568 aa-1.59□□□□□ -2.66
SRP54-214ENST00000630962 TLN2Q9Y4G6 2542 aa-1.6□□□□□ -2.66
SRP54-214ENST00000630962 ITPR1Q14643 2758 aa-1.6□□□□□ -2.67
SRP54-214ENST00000630962 IQCF6A8MYZ5 107 aa-1.6□□□□□ -2.67
SRP54-214ENST00000630962 HMGN1P05114 100 aa-1.6□□□□□ -2.67
SRP54-214ENST00000630962 SERP2Q8N6R1 65 aa-1.6□□□□□ -2.67
SRP54-214ENST00000630962 GNG8Q9UK08 70 aa-1.6□□□□□ -2.67
SRP54-214ENST00000630962 RGPD3A6NKT7 1758 aaPredicted RBP-1.61□□□□□ -2.67
SRP54-214ENST00000630962 RGPD4Q7Z3J3 1758 aa-1.61□□□□□ -2.67
SRP54-214ENST00000630962 ATOX1O00244 68 aa-1.61□□□□□ -2.67
SRP54-214ENST00000630962 EIF4G3O43432 1585 aaKnown RBP-1.61□□□□□ -2.67
SRP54-214ENST00000630962 PRDM15P57071 1507 aaPredicted RBP-1.61□□□□□ -2.67
SRP54-214ENST00000630962 UQCRHLA0A096LP55 91 aa-1.62□□□□□ -2.67
SRP54-214ENST00000630962 COL5A1-AS1Q5SY13 56 aa-1.62□□□□□ -2.67
SRP54-214ENST00000630962 ANKRD36BQ8N2N9 1353 aa-1.62□□□□□ -2.67
SRP54-214ENST00000630962 CEP295Q9C0D2 2601 aa-1.63□□□□□ -2.67
SRP54-214ENST00000630962 A0A1B0GUT8 65 aa-1.63□□□□□ -2.67
SRP54-214ENST00000630962 MT1XP80297 61 aa-1.63□□□□□ -2.67
SRP54-214ENST00000630962 DEFB106AQ8N104 65 aa-1.63□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms