RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 H3BQ15 152 aa1.29□□□□□ -2.2
SCN8A-210ENST00000627665 DPM2O94777 84 aa1.29□□□□□ -2.2
SCN8A-210ENST00000627665 IGKV2D-40P01614 121 aaPredicted RBP1.29□□□□□ -2.2
SCN8A-210ENST00000627665 IGLC2P0DOY2 106 aa1.29□□□□□ -2.2
SCN8A-210ENST00000627665 PDE6HQ13956 83 aa1.29□□□□□ -2.2
SCN8A-210ENST00000627665 Q6AWC8 147 aa1.29□□□□□ -2.2
SCN8A-210ENST00000627665 KRTAP26-1Q6PEX3 210 aa1.29□□□□□ -2.2
SCN8A-210ENST00000627665 LINC00269Q8N2A0 174 aa1.29□□□□□ -2.2
SCN8A-210ENST00000627665 OR5H6Q8NGV6 325 aa1.29□□□□□ -2.2
SCN8A-210ENST00000627665 OTORQ9NRC9 128 aa1.29□□□□□ -2.2
SCN8A-210ENST00000627665 LSM2Q9Y333 95 aaKnown RBP1.29□□□□□ -2.2
SCN8A-210ENST00000627665 TRBV6-8A0A0A6YYG3 113 aa1.28□□□□□ -2.2
SCN8A-210ENST00000627665 TRAV13-1A0A0B4J241 112 aa1.28□□□□□ -2.2
SCN8A-210ENST00000627665 TRAV21A0A0B4J279 112 aa1.28□□□□□ -2.2
SCN8A-210ENST00000627665 TRBV7-6A0A0J9YX20 115 aa1.28□□□□□ -2.2
SCN8A-210ENST00000627665 hDV103S1A0JD37 113 aa1.28□□□□□ -2.2
SCN8A-210ENST00000627665 IAPPP10997 89 aa1.28□□□□□ -2.2
SCN8A-210ENST00000627665 C9orf116Q5BN46 136 aaPredicted RBP1.28□□□□□ -2.2
SCN8A-210ENST00000627665 FAM74A1Q5RGS3 127 aa1.28□□□□□ -2.2
SCN8A-210ENST00000627665 PATE2Q6UY27 113 aa1.28□□□□□ -2.2
SCN8A-210ENST00000627665 PP632Q6XCG6 107 aa1.28□□□□□ -2.2
SCN8A-210ENST00000627665 TSKUQ8WUA8 353 aa1.28□□□□□ -2.2
SCN8A-210ENST00000627665 ZCCHC13Q8WW36 166 aaKnown RBP1.28□□□□□ -2.2
SCN8A-210ENST00000627665 HYLS1Q96M11 299 aa1.28□□□□□ -2.2
SCN8A-210ENST00000627665 PRELID3AQ96N28 172 aa1.28□□□□□ -2.2
SCN8A-210ENST00000627665 TPRKBQ9Y3C4 175 aa1.28□□□□□ -2.2
SCN8A-210ENST00000627665 SNURFQ9Y675 71 aa1.28□□□□□ -2.2
SCN8A-210ENST00000627665 MUC12Q9UKN1 5478 aa1.27□□□□□ -2.21
SCN8A-210ENST00000627665 FLGP20930 4061 aaPredicted RBP1.27□□□□□ -2.21
SCN8A-210ENST00000627665 TRBV7-3A0A075B6L6 115 aa1.27□□□□□ -2.21
SCN8A-210ENST00000627665 GVQW2A0A096LPI5 108 aaPredicted RBP1.27□□□□□ -2.21
SCN8A-210ENST00000627665 LOC105371267A0A1B0GV96 52 aa1.27□□□□□ -2.21
SCN8A-210ENST00000627665 FAM24AA6NFZ4 105 aa1.27□□□□□ -2.21
SCN8A-210ENST00000627665 K7ERJ3 54 aa1.27□□□□□ -2.21
SCN8A-210ENST00000627665 ERC2-IT1O76042 136 aa1.27□□□□□ -2.21
SCN8A-210ENST00000627665 TPT1P13693 172 aaKnown RBP1.27□□□□□ -2.21
SCN8A-210ENST00000627665 S100A10P60903 97 aa1.27□□□□□ -2.21
SCN8A-210ENST00000627665 UBE2D3P61077 147 aa1.27□□□□□ -2.21
SCN8A-210ENST00000627665 UBE2D2P62837 147 aa1.27□□□□□ -2.21
SCN8A-210ENST00000627665 C10orf113Q5VZT2 155 aa1.27□□□□□ -2.21
SCN8A-210ENST00000627665 TCTE3Q8IZS6 198 aa1.27□□□□□ -2.21
SCN8A-210ENST00000627665 C8orf59Q8N0T1 100 aaPredicted RBP1.27□□□□□ -2.21
SCN8A-210ENST00000627665 CARD19Q96LW7 228 aa1.27□□□□□ -2.21
SCN8A-210ENST00000627665 AP1S3Q96PC3 154 aa1.27□□□□□ -2.21
SCN8A-210ENST00000627665 CIB3Q96Q77 187 aaPredicted RBP1.27□□□□□ -2.21
SCN8A-210ENST00000627665 LCE3DQ9BYE3 92 aa1.27□□□□□ -2.21
SCN8A-210ENST00000627665 NAA60Q9H7X0 242 aa1.27□□□□□ -2.21
SCN8A-210ENST00000627665 GSKIPQ9P0R6 139 aa1.27□□□□□ -2.21
SCN8A-210ENST00000627665 LENEPQ9Y5L5 61 aa1.27□□□□□ -2.21
SCN8A-210ENST00000627665 TRBV25-1A0A075B6N4 114 aa1.26□□□□□ -2.21
SCN8A-210ENST00000627665 TRBV10-1A0A0K0K1A3 114 aa1.26□□□□□ -2.21
SCN8A-210ENST00000627665 TRBV27A0A0K0K1C4 114 aa1.26□□□□□ -2.21
SCN8A-210ENST00000627665 LOC107984640A0A0U1RRK4 108 aa1.26□□□□□ -2.21
SCN8A-210ENST00000627665 RBAKDNA6NC62 111 aa1.26□□□□□ -2.21
SCN8A-210ENST00000627665 F6UZH7 168 aa1.26□□□□□ -2.21
SCN8A-210ENST00000627665 H3BMG7 143 aa1.26□□□□□ -2.21
SCN8A-210ENST00000627665 FABP4P15090 132 aa1.26□□□□□ -2.21
SCN8A-210ENST00000627665 RRAS2P62070 204 aaPredicted RBP1.26□□□□□ -2.21
SCN8A-210ENST00000627665 FAM74A4Q5TZK3 123 aa1.26□□□□□ -2.21
SCN8A-210ENST00000627665 HRCT1Q6UXD1 115 aa1.26□□□□□ -2.21
SCN8A-210ENST00000627665 IZUMO2Q6UXV1 221 aa1.26□□□□□ -2.21
SCN8A-210ENST00000627665 COX6B2Q6YFQ2 88 aa1.26□□□□□ -2.21
SCN8A-210ENST00000627665 TEN1Q86WV5 123 aa1.26□□□□□ -2.21
SCN8A-210ENST00000627665 S100A16Q96FQ6 103 aaKnown RBP1.26□□□□□ -2.21
SCN8A-210ENST00000627665 NPVFQ9HCQ7 196 aa1.26□□□□□ -2.21
SCN8A-210ENST00000627665 SCN3BQ9NY72 215 aa1.26□□□□□ -2.21
SCN8A-210ENST00000627665 COMMD3Q9UBI1 195 aa1.26□□□□□ -2.21
SCN8A-210ENST00000627665 IGKV3OR2-268A0A0C4DH90 116 aa1.25□□□□□ -2.21
SCN8A-210ENST00000627665 CCDC160A6NGH7 325 aa1.25□□□□□ -2.21
SCN8A-210ENST00000627665 PYYP10082 97 aa1.25□□□□□ -2.21
SCN8A-210ENST00000627665 RNASE3P12724 160 aaKnown RBP1.25□□□□□ -2.21
SCN8A-210ENST00000627665 ROMO1P60602 79 aa1.25□□□□□ -2.21
SCN8A-210ENST00000627665 GNGT1P63211 74 aa1.25□□□□□ -2.21
SCN8A-210ENST00000627665 TEX261Q6UWH6 196 aa1.25□□□□□ -2.21
SCN8A-210ENST00000627665 RAB37Q96AX2 223 aa1.25□□□□□ -2.21
SCN8A-210ENST00000627665 PFDN5Q99471 154 aa1.25□□□□□ -2.21
SCN8A-210ENST00000627665 TMEM14CQ9P0S9 112 aa1.25□□□□□ -2.21
SCN8A-210ENST00000627665 A0A087WSZ3 146 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 IGKV2D-26A0A0A0MRZ7 120 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 PIGBOS1A0A0B4J2F0 54 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 IGHV1-24A0A0C4DH33 117 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 TRBV6-1A0A0K0K1D8 114 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 SMIM31A0A1B0GVY4 71 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 TRACP01848 142 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 CD3DP04234 171 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 CKS1BP61024 79 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 KRTAP19-6Q3LI70 58 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 MIC13Q5XKP0 118 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.24□□□□□ -2.21
SCN8A-210ENST00000627665 SNX29P2Q8IUI4 249 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 OR10AG1Q8NH19 301 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 BRK1Q8WUW1 75 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 LINC00526Q96FQ7 95 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 AQP10Q96PS8 301 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 MGST2Q99735 147 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 NMES1Q9C002 83 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 CYSTM1Q9H1C7 97 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 PSENENQ9NZ42 101 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 ORMDL1Q9P0S3 153 aa1.24□□□□□ -2.21
SCN8A-210ENST00000627665 UBE2D4Q9Y2X8 147 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms