RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 CRIP1P50238 77 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 KRTAP19-8Q3LI54 63 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 SCGB2B2Q4G0G5 96 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 Q86TA4 180 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 LIMD2Q9BT23 127 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 TMEM126AQ9H061 195 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 NIT2Q9NQR4 276 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 TMEM242Q9NWH2 141 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 ARL2-SNX15V9GYD0 113 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 TRAV13-1A0A0B4J241 112 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 LOC107984156A0A0G2JMH3 177 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 SMIM31A0A1B0GVY4 71 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 DISC1C4P0D8 188 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 TMEM238C9JI98 176 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 M0R378 163 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 SSSCA1O60232 199 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 SDC2P34741 201 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 FOXA3P55318 350 aaPredicted RBP0.48□□□□□ -2.33
VBP1-204ENST00000625964 NCS1P62166 190 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 GNG5P63218 68 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 UBE2L3P68036 154 aaKnown RBP0.48□□□□□ -2.33
VBP1-204ENST00000625964 C2orf82Q6UX34 121 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 SNX29P2Q8IUI4 249 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 ARL17AQ8IVW1 177 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 C8orf59Q8N0T1 100 aaPredicted RBP0.48□□□□□ -2.33
VBP1-204ENST00000625964 TMEM229BQ8NBD8 167 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 OR10AG1Q8NH19 301 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 PYDC1Q8WXC3 89 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 FAM107BQ9H098 131 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 SNURFQ9Y675 71 aa0.48□□□□□ -2.33
VBP1-204ENST00000625964 FAM25EA8MYX2 175 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 HPGDSO60760 199 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 MGPP08493 103 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 CXCL1P09341 107 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 S100A11P31949 105 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 DEFA3P59666 94 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 KHDC3LQ587J8 217 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 TMEM128Q5BJH2 165 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 C1orf195Q5TG92 126 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 SPANXN1Q5VSR9 72 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 C5orf17Q8NAS9 161 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 AP1S3Q96PC3 154 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 PRRT1Q99946 306 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 NPCDR1Q9BY65 106 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 IMUPQ9GZP8 106 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 GSKIPQ9P0R6 139 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 EPDR1Q9UM22 224 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 TPRKBQ9Y3C4 175 aa0.47□□□□□ -2.33
VBP1-204ENST00000625964 UBE2L5PA0A1B0GUS4 154 aa0.46□□□□□ -2.34
VBP1-204ENST00000625964 I3L3M4 83 aa0.46□□□□□ -2.34
VBP1-204ENST00000625964 IFNA1P01562 189 aa0.46□□□□□ -2.34
VBP1-204ENST00000625964 SULT1A1P50225 295 aa0.46□□□□□ -2.34
VBP1-204ENST00000625964 CKS1BP61024 79 aa0.46□□□□□ -2.34
VBP1-204ENST00000625964 RBM3P98179 157 aaKnown RBP0.46□□□□□ -2.34
VBP1-204ENST00000625964 SSBP1Q04837 148 aaKnown RBP0.46□□□□□ -2.34
VBP1-204ENST00000625964 JOSD1Q15040 202 aaPredicted RBP0.46□□□□□ -2.34
VBP1-204ENST00000625964 C9orf153Q5TBE3 101 aa0.46□□□□□ -2.34
VBP1-204ENST00000625964 Q5XG85 94 aa0.46□□□□□ -2.34
VBP1-204ENST00000625964 HRCT1Q6UXD1 115 aa0.46□□□□□ -2.34
VBP1-204ENST00000625964 AKAP14Q86UN6 197 aa0.46□□□□□ -2.34
VBP1-204ENST00000625964 BOD1L2Q8IYS8 172 aa0.46□□□□□ -2.34
VBP1-204ENST00000625964 SPRR2GQ9BYE4 73 aa0.46□□□□□ -2.34
VBP1-204ENST00000625964 MRPS26Q9BYN8 205 aaKnown RBP0.46□□□□□ -2.34
VBP1-204ENST00000625964 SCP2D1Q9UJQ7 156 aa0.46□□□□□ -2.34
VBP1-204ENST00000625964 ZFP30Q9Y2G7 519 aa0.46□□□□□ -2.34
VBP1-204ENST00000625964 TGIF2-C20orf24A0A0A6YYL0 155 aa0.45□□□□□ -2.34
VBP1-204ENST00000625964 A0A1B0GW54 56 aa0.45□□□□□ -2.34
VBP1-204ENST00000625964 A0A1W2PRE2 83 aa0.45□□□□□ -2.34
VBP1-204ENST00000625964 C9orf170A2RU37 121 aa0.45□□□□□ -2.34
VBP1-204ENST00000625964 C7orf77A4D0Y5 90 aa0.45□□□□□ -2.34
VBP1-204ENST00000625964 C17orf112F2Z3M2 114 aa0.45□□□□□ -2.34
VBP1-204ENST00000625964 F8VRH5 84 aa0.45□□□□□ -2.34
VBP1-204ENST00000625964 SMLR1H3BR10 107 aa0.45□□□□□ -2.34
VBP1-204ENST00000625964 ERC2-IT1O76042 136 aa0.45□□□□□ -2.34
VBP1-204ENST00000625964 SFT2D2O95562 160 aa0.45□□□□□ -2.34
VBP1-204ENST00000625964 AKAIN1P0CW23 69 aa0.45□□□□□ -2.34
VBP1-204ENST00000625964 POLR2KP53803 58 aaKnown RBP0.45□□□□□ -2.34
VBP1-204ENST00000625964 Q8IZM0 81 aa0.45□□□□□ -2.34
VBP1-204ENST00000625964 RPL39LQ96EH5 51 aaKnown RBP0.45□□□□□ -2.34
VBP1-204ENST00000625964 OBSCN-AS1Q96MR7 158 aa0.45□□□□□ -2.34
VBP1-204ENST00000625964 WDR61Q9GZS3 305 aaKnown RBP0.45□□□□□ -2.34
VBP1-204ENST00000625964 TOMM7Q9P0U1 55 aa0.45□□□□□ -2.34
VBP1-204ENST00000625964 TRBV27A0A0K0K1C4 114 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 FAM25AB3EWG3 89 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 FAM25CB3EWG5 89 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 FAM25GB3EWG6 89 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 F2Z2F3 143 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 HMGB3O15347 200 aaKnown RBP0.44□□□□□ -2.34
VBP1-204ENST00000625964 IGLC6P0CF74 106 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 GCHFRP30047 84 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 SPRR1AP35321 89 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 AP3S2P59780 193 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 RAB5BP61020 215 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 UBE2G1P62253 170 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 HBBP68871 147 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 MRPS10P82664 201 aaKnown RBP0.44□□□□□ -2.34
VBP1-204ENST00000625964 KRTAP20-2Q3LI61 65 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 TEX261Q6UWH6 196 aa0.44□□□□□ -2.34
VBP1-204ENST00000625964 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.44□□□□□ -2.34
VBP1-204ENST00000625964 Q6ZUT4 128 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms